Oncorhynchus mykiss (rainbow trout): 110505049
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Entry
110505049 CDS
T07259
Name
(RefSeq) catenin delta-1 isoform X1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110505049
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
HEAT_2
Atx10homo_assoc
ARM_UBP24_USP9X-Y
Motif
Other DBs
NCBI-GeneID:
110505049
NCBI-ProteinID:
XP_036826313
Ensembl:
ENSOMYG00000022322
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Position
31:33187186..33216904
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AA seq
940 aa
AA seq
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MEQCESAAALLESVREQEVQFEQLTRALEEERRRVRLTSPPSHTLPHTQNGRLGEADIER
LKLSEGYINGTQYRMVDPVHGVLDESCTPEDDSQDVQSVFSDDGTNGRRAGNAMKKVITS
RTVLPSDSMSIDGGLSVSGMGGYSATLDRTYRQAGGGDYPTATVPRNYHYGPAGGYDDYR
SAPPSEAYASLSRGTRMDDRYRPADGYRTLDSGYRAPSRQQLDPYAAQPQVGRGVRGVGS
ALELGGMRYAHQAHFGVEDDQRSLGYDDMEYSMAPPPMHPGYGTMPRLGPGPGGLDRRRL
RSCEDTLDGDMGGVDPYTWGVNMAMERGSMASLDSTLRKGPPTSWRQPELPEVIAMLNYR
LDPVKTNAAAFLQHLTFKNDKVKSEVRRLKGIPALVSLLDNPKKDVHHSACGALKNISYG
RDHDNKIAIKNCDGIPALVRLLRKAREQDLTDTITGTLWNLSSHDSVKMEIVDHALHALS
DEVMVPHSGWERGRDGGEESLKPRHLEWETALTNTAGCLRNVSSERSEARRKLRECTGLV
DSLMYIVQSQINRKDVDNKLVENSVCLLRNLSYQVHREVPGCERYLEAAPLNQGPVPGSN
KASCFGSRKGKDEWFSTGQKDADDGSADQVDIPKRTTPAKGYELLFQPEVVRVYTSLLRE
SKNPSVLEAAAGAIQNLCAGRWTYGRYIRATVRLEKGLPMMAELLAHGNDRVVRAMSGAL
RNLAIDNRNRELLGKHAVPHLVADLPGGQSQSARPLSEETVVSVLSTLTEVLGNSLEAAK
TLRASQGIERLVLINKDGKRSEREVRGAGQVLQLVWGHKDLRRPLEKDGWKKTDFTVNLN
TSANGPSARTNGTYEETTMPMLDKGAKRDMIPLNDLGPEAYSTLDQRERRRSLDNSLDTT
DTLKRGVYGGRKGSLPLLDSYDEELMVCITQGELPQPCPC
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtgtgagagcgccgcggctctgctggagtcggtgagggagcaggaggtgcag
tttgagcagctgaccagagcgctggaagaggagagaaggagggtacgcctcaccagcccc
ccgtcccacaccctcccccacacacagaacgggcgcctgggggaggcagacatagaacga
ctgaaactgagtgagggatacatcaacgggacacagtacaggatggtggacccagtgcat
ggcgttctagacgagagctgcacaccagaagatgattcacaggacgtacagtctgtcttc
tcagacgatggaacaaatggacggagggcagggaacgcgatgaagaaggtgatcacctcg
cgtaccgtccttccctctgattcgatgtccatcgacggaggactgtccgtctcaggtatg
ggcggttacagtgccactctggaccgtacctacaggcaggctggagggggggactacccc
acagccacggtccccaggaactaccactacggccctgcgggggggtacgacgactacagg
agcgccccgccctccgaggcctacgccagcctgagcagaggcacacgaatggacgaccgc
tacagacctgcggatgggtacaggaccctggactctgggtaccgcgcccccagcagacag
cagctggacccctacgcagcccagccccaggtggggcgaggggtgaggggtgtgggcagt
gccctggagctggggggcatgcgctacgcccaccaggcccactttggtgtggaggatgac
cagaggagtctgggatatgatgatatggagtatagtatggctcctcctcccatgcaccca
gggtacggcaccatgccacgactaggaccaggccctggaggactggacagacgcaggctc
cggagttgcgaggacactttggacggggacatgggaggagtcgacccctacacctggggc
gtcaacatggcgatggagaggggaagcatggcgtcattggacagcaccctgaggaagggc
ccgcccacttcctggagacaaccggagcttccggaggtcatcgccatgttgaactaccga
ctggacccggtcaaaaccaacgccgctgccttcctccagcacctcaccttcaagaacgac
aaggtgaagtcggaggtgcgtcgtttaaaggggatccccgctctggtctcgttgctggac
aaccccaagaaggacgtgcaccactcggcctgcggggcgctcaagaacatctcatacgga
cgagaccacgacaacaagatcgccatcaagaactgtgacggcatcccagccttagtcagg
ctactgaggaaggccagagagcaggacctcacagacaccattacaggcacgctgtggaac
ctttcgtctcacgactcggtgaagatggagatcgtggaccacgcgttacatgccctctct
gacgaggtgatggtgccgcactctggctgggagagaggtcgtgacggaggagaagagagc
ctcaaaccacgccacctggagtgggagacggccctcaccaacacggctggctgtctgagg
aacgtgagctcagaacgtagcgaggccaggcggaagttgagagagtgcacgggattggtg
gactcgctcatgtacattgtccaatcacagatcaaccgcaaagatgtggacaacaagttg
gtggagaacagtgtgtgtctgctgagaaatctgtcctatcaggttcaccgggaggttcct
ggctgcgagcgctacctggaggccgcgcccctaaaccagggccctgtccccggatccaac
aaggccagctgcttcggctcacggaagggcaaagatgagtggttttccacaggtcagaaa
gatgcggatgacgggagtgcggaccaggtcgatatcccaaagaggacgacgcctgccaaa
ggctatgagctgttgttccagcctgaggtggtgcgtgtctacacttccctgctgagagag
agcaagaacccctcagtgctggaggcagcagccggagccatacagaacctgtgtgccgga
cgctggacttatggccggtatatccgggccacggtacgtctggagaagggcctacctatg
atggcagagctgctggctcatgggaacgaccgtgtggtcagagccatgtccggggccctg
aggaacctggccatcgacaaccgcaaccgcgagctgctcggtaagcacgccgtgccccac
ctggtggcagacctgccgggtggccagagccagtctgcacgacctctgtctgaggagacg
gtggtgtctgtgctgagcacgctcactgaggtgctgggcaacagcctggaggccgccaag
accctcagagcctcccaaggcatcgagagactggtgctcatcaataaggatggtaagcgg
tctgagcgggaggtgcgcggggcaggccaggtgttgcagctggtgtgggggcataaggat
ctgcggcgccccctggagaaggatggctggaagaagactgacttcacggtgaacctcaac
acatccgccaacggcccctccgcacgcaccaacgggacctacgaggaaacaaccatgcca
atgctagacaaaggggcgaagagagacatgattccactgaatgacttaggccctgaagcc
tactctacactggaccagcgggagaggagacgctctctggacaactccctcgacaccaca
gacactttaaagcgtggggtgtacgggggcagaaagggttccctgcctctgttggactcc
tacgatgaagaactgatggtgtgcattacccagggtgagctgccccaaccctgcccctgc
tga
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