Oncorhynchus mykiss (rainbow trout): 110505067
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Entry
110505067 CDS
T07259
Name
(RefSeq) elongator complex protein 1 isoform X2
KO
K11373
elongator complex protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omy03016
]
110505067
Transfer RNA biogenesis [BR:
omy03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
110505067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
TPR_GEMI5
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
110505067
NCBI-ProteinID:
XP_021439698
Ensembl:
ENSOMYG00000041838
LinkDB
All DBs
Position
31:33791285..33802539
Genome browser
AA seq
1322 aa
AA seq
DB search
MRNLRLLKSLRCLKLQGPGTPQCFTVRTDTGTVLIASEYSVTELDTRAGQVVNEVSLTVE
RYLPEDGGGTVVGIQDLPDQESVCVATATGDVILYNLNTNQLECVGSVDSGLSAMSWSPD
QELVTLTTGQDTIIMMTKNFEPITEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKHAAQ
KKTIEVQPAMSWDDRRPRVTWRGDGQLFAVSSVCPLTGARKVRVWNRECVLQSTSETVNG
LEQSLCWKPSGSLIAATQRHPNKHSVVFMEKNGLLHGDFTLPFGKEQVKVKELLWNSDST
VLAVWLEDMTPGEGGQVNTYIQLWTVGNYHWYLKQNLYFGSDPQRAPAYVSWDPEMPLRL
HLVTRGWVSLNYDWGWSTDRSHGEDGHDNANVAVIDGDKLLVSTFRQCVVPPPMCAYDLQ
LPAPVNLVTFQRQRTNELAALTADGHISVYGQGTEKLSEPAAGLGGFRSVTHAPQLKTTY
RVAVDQEEPLALRLLLWLKEDVFLGVGACTDGPSQSKMLILGPSEAQGPQPTLEIRSHVE
VEGHVISMCHSSKTGTVALQLEDGQIRKFLWDSLKPSVVEWQDSTGCRINFPDPCVQTAL
FTIEEEHLLGLTDRSHLFVGETEVASNVSSFVVYDDFLLLTTHSHTCRCFRLTTLTVKGL
QVALAADGGQNQNDQNDETLRRVERGSRIVTVVPQDTRLILQMPRGNLETIRHRALVLAQ
LRKWLDSQRFREAFECMRKLRINLNLIYDHNPKVFLESVETFLRQLDSINHINLFLTELK
EEDTTTTMYPCPVNTTGQSAPAACGKKVDIVCDALRRTMESMDQHKYCLSILTSHVKKTV
PELEVALQKVHELRVNPPSAANAVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAE
KSQKDPKEYLPFLNMLKTLEPNYQRYSIDKHLKRYRKALHHLSKCGEKHFTEALNLVKDQ
RLYSEALGLYPTDSPQYKALSCAYAEYLVEQQQAEQAGLLLWRCGEATRALQAFVGSASW
RYALCVAEQIPLPSDQLALLARDLAEKLIELRRYTEAAILLERYAKDCEEAISALITGAV
WEEALRLVYLYNRQDIIETNFKPALLEACSSQASYLEAQKAMFTRHKTRLSVVRELKEKA
RLELLDEDVPDCPEAELYSEASSVMTGSHAGSKYSHSNSRISSRSSKNRRKAERKKLSLK
EGTPLEDMALLHALAEIIHSVDKMREEVHSLLKALVLFQFDGQAGRLQHAYGEALQMIEV
ALPEVWQEGLQQTQAPITGPNSTANSIMASFQQPRPSATQDSETPPPPKMRNGVKWKLSI
LK
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacttgaggttgctgaagagccttcgttgcttgaagctgcaaggcccgggcacg
ccgcaatgtttcactgttcggacggacacaggcacggtgctcatcgcttcagaatactcc
gtcacagagttggacacacgagctggccaggtggtgaatgaggtgtcgttgacagttgag
cgctatcttccagaggatggcggtgggacagttgttggtatccaagacttaccagaccag
gagtctgtgtgcgtggcaacagccactggtgatgtcattctctacaatctcaacactaac
cagctggagtgtgtgggcagtgtggacagtggtctgtcagccatgagctggagcccggac
caggagctggtcactctcaccactggtcaggacaccattatcatgatgaccaaaaacttt
gaacccatcacggaggttgggatccatcaggatgactttggagaggggaagtttatcaca
gtgggctgggggaagaaagagacacagttccatggctcagagggcaagcatgctgcccag
aagaagactatagaggtgcagccggccatgtcgtgggacgaccgcaggccgagggtgacg
tggagaggagacgggcagctcttcgctgtgagctcagtttgccccctgactggtgccagg
aaggtcagagtgtggaacagagagtgtgtcttacagtcgacaagtgaaaccgtcaacggt
ctggagcagtcactgtgttggaaaccatcaggtagtttgatagcagccacacagcgtcat
cctaacaagcacagtgtggtgtttatggagaagaacggcctcctacacggcgacttcacc
ctgccctttggcaaagaacaggtcaaggtgaaggagctgctatggaacagtgactcgact
gtgttggctgtgtggctggaggacatgacaccgggagaggggggtcaagtcaacacatat
attcagctgtggacagtaggtaactaccactggtacctgaagcagaacctgtacttcggc
agcgacccccagagggcaccagcctacgtgagctgggatcctgagatgcccctgcggctg
caccttgtgacccgaggctgggtcagcctgaactacgactggggctggagcaccgaccgc
agccacggggaggacgggcatgacaacgccaatgtggccgtgatcgacggcgacaagctc
ctcgtgtcaacgtttcgtcagtgtgtggtgcccccgcccatgtgtgcctacgaccttcag
ctgcccgcccccgtcaacctggtgaccttccagcgccagaggaccaatgagctggcagcg
ctcacagccgacggacacatctctgtctacggccaaggtactgagaaactgagtgagcct
gcagccggattgggaggattccgatctgtcacacacgcccctcagctaaagacaacctac
agggttgcggtggatcaggaggaacccctggctttgcgtctgctgctgtggctgaaagag
gatgtgttcctgggggtgggggcctgtacagacgggccgtcccagtccaagatgctcatc
ctgggaccctcagaggcccagggcccccagccaaccctggagatcaggtcacatgtggag
gttgaaggtcacgtgatcagcatgtgtcacagctccaagacgggcacggtggcgctgcag
ctggaggatggccagatcaggaagttcctctgggactctttgaaacctagtgtggtggag
tggcaggactcaacaggctgcagaatcaacttcccagatccctgtgtgcagacggccctc
tttaccatagaagaggagcatctgttagggcttacggaccgatctcacctgtttgttggt
gagacagaggtggcctccaacgtttcctccttcgtggtctacgacgacttcctgctgctc
accacacactcgcacacttgccgctgcttccgactcaccacgctcactgtcaaagggctg
caggtggccttggctgccgacggaggtcagaatcagaatgaccagaatgacgagactctc
cgcagggtagagaggggctccagaatcgtcactgtggtcccccaggacaccaggctcatc
ctacagatgcctcgcggtaacctggagaccatccgccatcgagcactggtgttggctcag
ctccgaaagtggctggacagtcagaggttccgagaggcctttgagtgcatgaggaagctg
cggatcaaccttaacctgatctacgaccacaaccccaaggtgtttttagagagcgtggag
actttcctgagacagctggactctatcaatcacatcaacctgttcctcacagagctcaag
gaggaagataccactacaacaatgtacccttgtccagtgaacactacaggacagtcagcc
cctgcagcttgtgggaaaaaggtggatattgtctgtgatgcgttacgccgcaccatggaa
tctatggaccagcataagtactgtctgtctattttgacgtcacacgtgaagaagactgtt
cctgagctggaggttgccctgcagaaagtccacgagcttcgagtgaacccacccagtgct
gccaacgcagtgagtgcggaggaggctctgaagtacctcttgttcttggtcaatgtcaac
gagctgtatgaacactctctgggcacctacgactttgacttggtcctcatggtggccgag
aagtcccaaaaggaccccaaagagtaccttcccttcctgaacatgctgaagactctagag
cccaactaccaacgctactccattgacaaacacctcaagagatacaggaaggccttgcat
cacctcagcaagtgtggtgagaagcacttcaccgaggccctgaatctggtgaaggaccag
aggctgtatagtgaagccctggggctctacccaacagacagccctcagtacaaggcgctg
agctgtgcctacgccgagtacctggtggagcagcagcaggcggagcaggcagggttgttg
ctttggcgctgcggcgaggcgacccgcgccctccaggcctttgtgggcagtgccagctgg
aggtatgccctctgtgtggcagagcagatccccctgccatccgaccagctggcattgctg
gccagggacctggcagagaaactgatagagctcagaagatatacggaggcggccatattg
ttggagcggtatgccaaggactgtgaggaggccatctcagctctgatcacaggtgcagtc
tgggaagaagcacttcgattggtgtatttgtacaacagacaagacataattgaaacgaac
ttcaaaccagctctcttggaagcatgtagttctcaggcctcttacctggaagctcagaag
gcgatgttcactcgtcacaaaacccgtctgtccgtggtacgggagcttaaggaaaaagcc
aggctggagttactggatgaggatgtcccagactgtccggaggcagagctctattcagag
gccagtagtgtgatgacaggcagtcatgctggctccaagtactcgcatagtaactcccgc
atctcctcgaggtcgtctaagaatcgccggaaggccgagcgcaagaagctgagtctgaag
gaagggacccccctagaggacatggccctgctgcatgccctggcagagatcatccactct
gtggacaagatgagagaagaggtgcacagcctgctgaaggccctggtgctgttccagttt
gacggacaggccgggaggttgcaacatgcctatggggaggctctccagatgatagaggtg
gcccttcccgaggtgtggcaggagggtcttcagcagacccaggcaccgatcacaggtcct
aactccacagccaacagcatcatggcttcatttcaacagccaagaccctcagcaacccaa
gattcagagaccccaccacccccaaaaatgagaaatggtgtcaagtggaagctgagtatt
ctgaagtag
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