Oncorhynchus mykiss (rainbow trout): 110505099
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Entry
110505099 CDS
T07259
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04080
Neuroactive ligand-receptor interaction
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110505099
04082 Neuroactive ligand signaling
110505099
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110505099
Ion channels [BR:
omy04040
]
Ligand-gated channels
GABA-A
110505099
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
SAP130_C
TAF4
Motif
Other DBs
NCBI-GeneID:
110505099
NCBI-ProteinID:
XP_021439746
Ensembl:
ENSOMYG00000044782
UniProt:
A0A8C7UX08
LinkDB
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Position
31:35638466..35666137
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AA seq
555 aa
AA seq
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MVSAKKEMVTAMYPSYISTLFYFFCLIACVKRISGTIKKDDRIYPENFTRILDRLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLRYEGPIEILRLN
NMMVANVWTPDTFFRNGKKSVAHNMTAPNRLFRIMKNGTILYTMRLTISAECPMKLVDFP
MDGHACPLKFGSYAYPKTEMIYTWTKGPQYSVEVPPESSSLVQYDLIGHTVSSEEVKSIT
GEYVVMTVHFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAEMERLKRKPPKCPP
APQTTPVKVKDMEEVLQHNPDTNGNLRKRMNYMSQQDGQKAESNSTAAARGVTRNQPQSG
QSSSSKGAPGGAIILPHSSPGPASQPNTSSLTLSAMNTPLAPPTSEKAMTTPANQSQPTA
DSSLRDLLGPRLEHIQMMGKNEPKQSPCSQPTTASMGGTSKIDKYARILFPVSFGAFNMV
YWVVYLSKDTMGGQI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtaactgcgatgtaccccagttacatttcgactctc
ttctactttttctgcttgattgcttgtgtaaagagaatctctggaacgataaaaaaggat
gacagaatatatcccgagaatttcacacgcattttagacagactcctggacgggtatgac
aacagactgcgacctggatttgggggtccggtgacagaggtgaaaacagacatttatgtg
acaagtttcgggcctgtctctgatgttgaaatggagtacaccatggatgtgttcttcaga
cagacatgggttgacaggaggctgaggtatgagggtcctattgagatcctccgactcaac
aacatgatggtcgccaatgtgtggactcctgacaccttcttcaggaatggcaagaagtct
gtggcacacaacatgactgcccccaacaggttgttccgcatcatgaagaacggcacgatt
ctttacaccatgaggttgactatcagtgcagagtgtcccatgaagcttgtggacttcccc
atggatggacatgcatgccctctcaagtttggaagctatgcataccctaaaacagagatg
atttatacctggaccaaaggaccacagtattcagtggaggttcccccagaatcatccagc
ctagtgcagtatgatctcattggccacactgtcagcagtgaggaggtcaagtcaatcaca
ggtgaatacgtggtgatgacagtgcacttccacttgaagcggaaaatgggctacttcatg
attcagacgtatatcccctgcatcatgacagtaatcctctcccaagtgtccttctggata
aataaagaatcagtcccggctcgaacggttttcggcatcaccacggtcctgaccatgacc
acgttaagcatcagcgcgcgccactccctccccaaagtctcctacgccaccgccatggac
tggttcattgccgtgtgcttcgcctttgtcttctcggctctcatagagttcgctgccgtc
aactacttcaccaatgcagagatggagagactgaaaaggaagccgccaaaatgcccgccg
gcgccccaaacaaccccagtgaaagtgaaggatatggaggaagttctgcagcataaccct
gacaccaatggtaacctgcggaaacggatgaactatatgtcccagcaagatggccagaaa
gccgagtcaaacagcacagcagcggcaagaggggtaaccaggaaccaaccccagtctggc
caatcatcttcatctaagggggcacctggcggcgccatcatcctaccacactccagcccc
ggccccgccagccaacccaacacttcctccttgaccctgtctgccatgaacacgcccctg
gctccacccacaagtgaaaaagcaatgacaacaccagccaaccagagccagcccacagct
gactcctcgctccgggaccttctaggacccagactggagcacattcagatgatgggcaaa
aatgagcccaagcagtcgccatgctcccagccgaccaccgccagtatgggtgggaccagt
aaaatcgacaagtatgcccgcatcctgttcccggtgtcctttggcgcattcaacatggtg
tactgggtggtttacttgtcaaaagataccatgggaggccaaatttag
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