KEGG   Oncorhynchus mykiss (rainbow trout): 110505128
Entry
110505128         CDS       T07259                                 
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C
  KO
K05450  platelet derived growth factor C/D
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010  MAPK signaling pathway
omy04020  Calcium signaling pathway
omy04510  Focal adhesion
omy04540  Gap junction
omy04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    110505128 (pdgfc)
   04020 Calcium signaling pathway
    110505128 (pdgfc)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110505128 (pdgfc)
   04540 Gap junction
    110505128 (pdgfc)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    110505128 (pdgfc)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:omy04052]
    110505128 (pdgfc)
Cytokines and neuropeptides [BR:omy04052]
 Cytokines
  Growth factors (RTK binding)
   110505128 (pdgfc)
SSDB
Motif
Pfam: CUB PDGF
Other DBs
NCBI-GeneID: 110505128
NCBI-ProteinID: XP_021439791
Ensembl: ENSOMYG00000042952
LinkDB
Position
31:complement(38162170..38249531)
AA seq 333 aa
MILPLFILLVSLLQKHGSEAESSHISKFQQPSLKEQNGVQDSQHEKIIPVTGEGVIHSPD
FPLTYPRSTVLVWRLVASNDNMRIQLSFDERFGLEDPEDGICKYDFVELEEPSEDTILGR
WCGSQVPASHMSKGGQIRVRFRSDEYFPSEPGFSIRYSLLPMPEEIPSLQSADALSEAVA
GLGTVEEVMKYLEPERWQLDMEDLYKPTWHILGKSFLHNKKSRGVDLNLLREEVRLYSCT
PRNFSISLREELKRTDAIFWPSCLLVKRCGGNCACCSHRCSDCQCVPTRVVKKYHEVLLL
KHRSGGRGLQKSMTDVPLEHHEECDCVCKDDWD
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgatccttccattattcatcctacttgtgtcgcttctccaaaaacatggctcagaagct
gaatcaagtcacatcagcaaattccaacaaccaagtttaaaggaacaaaacggagtccaa
gattcccagcatgagaagatcatccccgtcacaggagagggagtgatccatagtccggac
ttcccactcacctaccccaggagtaccgtgttggtctggagactagtggcctccaatgac
aacatgagaatccagttatccttcgacgagaggtttggcctggaagacccagaggatgga
atatgcaagtatgattttgtggagctcgaggagccgtccgaggacaccatcctgggccgc
tggtgcgggtcccaggtacccgccagccacatgtccaaaggcggtcagatccgggtgaga
ttcagatctgatgagtacttcccctccgagcctggcttcagcattcgctactccctgctc
cccatgcccgaggaaattccatctctgcagagcgcagatgcgttgtctgaggccgtggct
ggcctcggtaccgtggaggaggtcatgaagtacctggagcctgagagatggcagcttgac
atggaagacctatacaagcccacgtggcacatcctggggaagtcattcctccacaacaag
aaatccagaggagtggatctcaacctgttgagagaagaggtgagactgtacagctgcacg
ccgcgcaacttctctatctccctgcgcgaggagctcaagaggacggatgccatcttctgg
cccagctgcctcctggtgaagcgctgcgggggcaactgtgcctgctgctcgcatcgctgc
tccgactgccagtgtgtgcctacccgggtcgtcaagaagtaccacgaggttctcctgctg
aagcaccgaagcgggggccgaggcctgcagaagtccatgaccgatgtgcccttggaacac
cacgaggagtgcgactgtgtttgcaaagacgactgggactga

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