Oncorhynchus mykiss (rainbow trout): 110505128
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Entry
110505128 CDS
T07259
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C
KO
K05450
platelet derived growth factor C/D
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04020
Calcium signaling pathway
omy04510
Focal adhesion
omy04540
Gap junction
omy04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110505128 (pdgfc)
04020 Calcium signaling pathway
110505128 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110505128 (pdgfc)
04540 Gap junction
110505128 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
110505128 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
110505128 (pdgfc)
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Growth factors (RTK binding)
110505128 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
110505128
NCBI-ProteinID:
XP_021439791
Ensembl:
ENSOMYG00000042952
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All DBs
Position
31:complement(38162170..38249531)
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AA seq
333 aa
AA seq
DB search
MILPLFILLVSLLQKHGSEAESSHISKFQQPSLKEQNGVQDSQHEKIIPVTGEGVIHSPD
FPLTYPRSTVLVWRLVASNDNMRIQLSFDERFGLEDPEDGICKYDFVELEEPSEDTILGR
WCGSQVPASHMSKGGQIRVRFRSDEYFPSEPGFSIRYSLLPMPEEIPSLQSADALSEAVA
GLGTVEEVMKYLEPERWQLDMEDLYKPTWHILGKSFLHNKKSRGVDLNLLREEVRLYSCT
PRNFSISLREELKRTDAIFWPSCLLVKRCGGNCACCSHRCSDCQCVPTRVVKKYHEVLLL
KHRSGGRGLQKSMTDVPLEHHEECDCVCKDDWD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgatccttccattattcatcctacttgtgtcgcttctccaaaaacatggctcagaagct
gaatcaagtcacatcagcaaattccaacaaccaagtttaaaggaacaaaacggagtccaa
gattcccagcatgagaagatcatccccgtcacaggagagggagtgatccatagtccggac
ttcccactcacctaccccaggagtaccgtgttggtctggagactagtggcctccaatgac
aacatgagaatccagttatccttcgacgagaggtttggcctggaagacccagaggatgga
atatgcaagtatgattttgtggagctcgaggagccgtccgaggacaccatcctgggccgc
tggtgcgggtcccaggtacccgccagccacatgtccaaaggcggtcagatccgggtgaga
ttcagatctgatgagtacttcccctccgagcctggcttcagcattcgctactccctgctc
cccatgcccgaggaaattccatctctgcagagcgcagatgcgttgtctgaggccgtggct
ggcctcggtaccgtggaggaggtcatgaagtacctggagcctgagagatggcagcttgac
atggaagacctatacaagcccacgtggcacatcctggggaagtcattcctccacaacaag
aaatccagaggagtggatctcaacctgttgagagaagaggtgagactgtacagctgcacg
ccgcgcaacttctctatctccctgcgcgaggagctcaagaggacggatgccatcttctgg
cccagctgcctcctggtgaagcgctgcgggggcaactgtgcctgctgctcgcatcgctgc
tccgactgccagtgtgtgcctacccgggtcgtcaagaagtaccacgaggttctcctgctg
aagcaccgaagcgggggccgaggcctgcagaagtccatgaccgatgtgcccttggaacac
cacgaggagtgcgactgtgtttgcaaagacgactgggactga
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