Oncorhynchus mykiss (rainbow trout): 110505227
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Entry
110505227 CDS
T07259
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110505227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110505227
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
hnRNP proteins
110505227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_MARF1
HnRNP_M_NLS
RRM_3
RBD_DEAH11
RRM_5
DUF7552
Motif
Other DBs
NCBI-GeneID:
110505227
NCBI-ProteinID:
XP_021440029
Ensembl:
ENSOMYG00000016801
LinkDB
All DBs
Position
1:complement(20180116..20187417)
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AA seq
666 aa
AA seq
DB search
MSTEAAAPEKPGQGEINGKAKHEPSVRKERPQKRGGGRFEPYGNPSKRYRVFVSNIPYDV
KWQALKDLMKEKVGEVTYVEHLMDGEGKSRGCAVVEFRTEELMKKAVEKVNKHNLNGRPL
KVKEDPDGVIAQRDAHRSQGGGGPPGGHGGMNMGMDRMNMERMNMDRMGPGPGAPPMVNI
PPSLMNNSNIPNEIIHGLQAGKIGSTVFVANLDYKVGWKKLKEVFGMAGVVVRTDILEDK
DGNSRGMGTVTFDMPIEAVQAVSMFNGQLLFNRVMHVKLDEKSLPKGDFAPPERPPALPR
GLSGIGLGLGPGGQPIDATALNRGGGGMGNMGPGGMDGMGFGGGMGRMGGMDNFGGMNNM
ERFGPSGMGRMNEMDRGLGGSFDREFGRNDMGMSRNNFGESFERGMGSSLGMDRMSSGMD
RLGGGMDRLGGMERMGMERMDRVSDLDRLGGSGFDRMGSGLDRLGPSMDRLGSGLDRMSS
SVDRLGPAGFDRLGPSSLERMPAGLDFPSPMGMADRMERMGTNFDRMGSAGIDRFPATGL
DRMGSSMDRMGAVGVGGQFDRPAEMERGGFGGNGFGGAGGPGANARKGCQIFVRNLPFDF
TWKMLKDNFNTCGIVQYADIKMENGKSKGCGVVRFDNPETAERACRTMNGYRLNGREIDV
RIDRNA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgaggccgctgctccggagaaaccaggccagggggaaattaacggcaaggcc
aagcatgaacccagtgtcaggaaggaaaggccccagaagcgtggaggtggtcgctttgaa
ccctatggaaacccatcaaagagataccgtgtgtttgtcagcaacattccatatgatgtg
aaatggcaggcactcaaagacctaatgaaagaaaaagtgggtgaggtaacgtacgtggaa
cacttaatggacggagaaggcaaatcgaggggttgtgcggttgttgagttcaggactgag
gaactgatgaagaaggctgtggagaaggtcaacaagcacaacctgaatgggcggcccctg
aaggtcaaagaggacccagatggtgtgattgcccagagggatgcccacaggtcccagggg
ggtggtggaccccccggtggccatggtggaatgaacatgggcatggatcgcatgaatatg
gagcgaatgaacatggaccgcatgggcccaggaccgggcgcgccacccatggtcaacatc
cctcccagcctcatgaacaactccaacatccccaatgagatcatccacgggctgcaggct
ggcaagattggaagcactgtctttgtagctaatctggactacaaggttggctggaagaag
ctgaaggaggtgtttggcatggcaggtgtagtggtgcgcactgacatcctggaggacaaa
gatgggaatagcaggggcatgggcaccgtcacctttgacatgcctattgaagctgtccaa
gccgtcagtatgttcaacggtcaactgcttttcaaccgggtcatgcatgtcaagctggat
gagaagtccttgccaaaaggagactttgcaccacctgagagacccccagcactaccccgt
ggccttagtggcatcgggctgggacttgggcctggtggccaacccattgacgccaccgca
ctgaacagaggaggtggaggaatgggcaacatgggacctgggggcatggatggcatgggc
tttggtggtggcatgggtagaatgggaggcatggataactttggtggaatgaacaacatg
gagcgttttggaccatctggaatgggcaggatgaatgagatggaccgtgggcttggtggt
tcttttgaccgggagtttggtcgaaatgatatgggcatgtctcgcaataattttggcgaa
tcctttgaaagaggaatgggtagctcactgggcatggaccgcatgagctctggcatggat
cgcttgggtggtggaatggaccgtctgggtggaatggagcgcatggggatggagaggatg
gaccgcgtgtctgatctggacaggctaggggggtctggctttgacaggatgggctctggg
ctggaccggctggggcccagtatggacaggcttggttctgggctggaccgtatgagctcc
agtgtggaccgcctgggcccagctgggtttgaccgcctaggcccgtccagtttggaacgt
atgcctgctggcctggacttcccctctcccatgggcatggcggaccgcatggagaggatg
ggaaccaactttgaccgcatggggtcagccggtattgaccgcttcccggccaccgggctt
gaccgcatgggctcctccatggaccgcatgggcgctgtcggtgttggcggccagtttgac
cggccagctgagatggagcgtgggggctttggaggaaatggctttgggggggccggaggt
cctggagccaacgccaggaagggctgccagatctttgtcagaaatctgccctttgacttc
acctggaaaatgctgaaggataacttcaatacatgcggtattgtccaatatgctgacatc
aagatggagaatggcaagtccaagggctgtggcgtggttcgctttgacaacccggagact
gcagagagagcctgtcgcaccatgaatggctacaggctgaatggaagagagatcgatgtc
agaatcgacagaaatgcgtaa
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