Oncorhynchus mykiss (rainbow trout): 110505246
Help
Entry
110505246 CDS
T07259
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110505246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110505246
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110505246
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Utp12
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR55
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_VPS8
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
ASA1
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_Aladin
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_ACSF4
CFAP251_N
WD40_2
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_WDR75_2nd
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
110505246
NCBI-ProteinID:
XP_021440025
Ensembl:
ENSOMYG00000027512
LinkDB
All DBs
Position
25:complement(4672808..4714274)
Genome browser
AA seq
646 aa
AA seq
DB search
MADGGCNSSLRLPCVFSPKSRQYLASFAQDGRLRIWNTDSKILHQEYVPSAHLSATCTCI
VWGPCRIAKEGPRRKKRKSEAGHVEDLADLLALGTVAGSIIIYSAVKGALHCTLDGGHNG
GVNCVEWHPEDGLLYSGSDDSYIVEWDLQTSKTRCKWKADRASVTSLCVSPDGKLLLSAG
QTIKMWDLKTKEVYRKFTGHSTAVTNLRFATTRPPDSNGLYFLSGAAHDRLISVWQVQED
SNDKNSVVSFTLTDDPQHIDLFTSNSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPLSPS
CTVQMSGLEDIPVPVPLLAAALTADTRSLLLAYGSYLQPVMERLDVNTAERHVCLTRNVH
TTLAIAMETTVSKVKTPVVNAKSKVLVPGLPGHQAPVKAALGSEKRKKGTDTKEMSIEER
LGEIDLSREKGGVKETPSLQTDNFAVLLVQGLESKDANILNNVFQTRKDNLIKKTVSRLP
IPAVLPLVEELTKRMQGHPYTAVLMVRWLKAVLMQHTSYLSSLPDLVSQLGVLYHMIESR
VKMFHKLTKLHGKLYLLMTQVVTGDSGVTDVDHKAKLVYEDASSDEDKASGDEGLPDEDS
DNWEEDGIEDETMEDEHREETEEGMRTESKANGDSDMEPGNESEEE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtggatgcaattcttcgttgcgtctaccctgcgttttctcgccaaaatca
cgccaatacctagcttcatttgcccaagatggtagactccgtatatggaacacagatagt
aaaatacttcatcaagaatacgtgccttcagcccacttgagtgccacttgtacctgcata
gtttggggaccatgccgaatcgccaaggagggacctcggaggaagaagaggaaatcagag
gcagggcatgtggaggatttggcggatctgttggctctgggaacggtggcgggcagcatt
atcatttacagcgcagtgaagggggcactgcactgcacactggatggaggtcataatggg
ggagtgaactgtgttgagtggcaccccgaggacggcctgctctacagcggctcagacgac
tcctacatcgtagagtgggacctgcagacaagcaagacccgctgtaagtggaaggcggac
cgtgcgtcagtgaccagtctgtgtgtgagtcctgatggcaaactgctgctctcagcggga
cagaccatcaagatgtgggacctcaagaccaaggaggtgtaccggaagttcacaggtcac
tccacagctgtgacgaacctgcgcttcgccaccacgcgtcccccggacagcaatggcctc
tacttcctgtccggggcggcccacgacagactcatcagcgtgtggcaagtccaggaggac
agcaatgacaagaactcggtggtgtccttcaccctgacggatgacccccagcacattgac
ctcttcacttccaacagcaaggaagaggcggtgaggctggcggttgtgtgtaaagatggg
cagcttcatctctttgagcactttctgaacgggccttgtaagaagccgctgtccccctcc
tgtacagtccagatgtctgggcttgaggacatccccgtgcccgttcctctgttggccgcg
gccctcaccgcggacacacgcagcctcctgcttgcctatggcagctacctgcagccagtc
atggagagattggatgtgaacacagcagagagacatgtctgcctaacccgcaatgtccac
accaccctcgccatcgccatggaaactactgtttccaaggtgaaaaccccagtagttaac
gccaagagcaaagttcttgtccctggtcttcccggtcaccaagcgccggtcaaagcagct
ttgggatccgagaagaggaaaaagggcacagataccaaagagatgtccatagaggagcga
ctgggagagatcgacttgtcacgtgagaagggcggagtcaaggaaaccccctctctgcag
acggacaacttcgcggtgctactggtgcagggtctggagagcaaggacgccaacatcctc
aataatgtgtttcagacccggaaggataacttaataaagaaaaccgtttcccggttaccc
atccctgccgtcttgccattggtggaagagctcaccaagagaatgcaagggcatccatac
acggcagtgctgatggtgcgatggctcaaggctgttctcatgcagcacacctcctacctg
tcctcgttgccagacctggtgtctcagctgggagtgttgtaccacatgattgagagcagg
gtcaaaatgttccacaaactgaccaagctgcacggcaagctctatctgctcatgacacag
gtggtgacaggtgacagtggtgtcacagacgtggaccataaggccaagcttgtctacgag
gacgcgtcctctgatgaagacaaggcttcaggcgatgaaggtcttccagacgaagattct
gataactgggaggaggatggcatagaggatgagactatggaagacgagcatagagaagag
acggaggaaggcatgaggacggaatccaaagctaacggtgattccgacatggaaccggga
aacgagagcgaggaagagtga
DBGET
integrated database retrieval system