Oncorhynchus mykiss (rainbow trout): 110505282
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Entry
110505282 CDS
T07259
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04020
Calcium signaling pathway
omy04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110505282 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110505282 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
omy04030
]
110505282 (ptafr)
G protein-coupled receptors [BR:
omy04030
]
Rhodopsin family
Others
Platelet activating factor
110505282 (ptafr)
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
110505282
NCBI-ProteinID:
XP_021440092
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Position
25:complement(7498371..7506345)
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AA seq
372 aa
AA seq
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MGDKEDLVVTTAVNFVGNGNFLDSAFRYTLFPVFYGVVFILGLISNSYVLFVLWRLRDAK
ALNEICIYMANLTVADLLFVSALPFWIGYYHHGGVWLYGEFLCRVTGVFFFINTYCSILF
LAAISINRYWAITRPLDAASSDHWCRGVAVTAVIWGVTLSMSVPYLVKTGIQKDKSNVSR
CFEGYHHETDGEKRLVAATHLIIVGCFVLVFFLVVVCNLLIARALLAQSLTQARGSSSSK
PRGVKGRALQMLCAVVGVFVVCFLPHHMVQGPWTLAVLEIKEGWGSTEWSQKTKQWLNDT
HQVTLMLMGLNCLFDPVVYCFATRRFHMYIKDHLKKVGRGRACSETAITHISIVECKNVS
QRLHSEQQQLNN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgggggataaagaggacttagtagtgaccacggctgtgaactttgtcgggaacggaaac
ttcctggactctgctttccgctacaccctcttcccagtgttctacggtgttgtgttcatc
cttgggctgatatccaatagttacgtgctgttcgtgctgtggcgcctgcgcgatgccaag
gccttgaacgagatctgcatctacatggccaacctgactgtggccgacctcctcttcgtg
tctgccctccccttctggattggctactaccatcatggtggcgtctggctctacggcgaa
ttcctgtgccgtgtcactggcgtgttcttcttcatcaacacctactgctccatcctcttc
cttgctgccatcagtatcaaccgctactgggccatcacgcgtccgctggatgccgcctcg
tccgaccattggtgccgtggggtggccgtcacagcggtcatctggggggtcactctgtcc
atgtctgtgccatacctcgtgaagacgggcattcagaaggacaagagcaacgtgtcgcga
tgcttcgagggctaccaccatgagacggatggcgagaagcggctggtggccgcaacccac
cttatcattgtggggtgcttcgtcttggtcttcttcctcgtcgtagtgtgtaatctgctc
atcgcccgggcgttactagcccagtcccttacccaggctcggggctccagttcctccaaa
ccccggggggtgaagggccgggccctgcagatgctgtgcgctgtggtgggggtgttcgtg
gtgtgcttcctcccccaccacatggtccagggcccctggaccctggctgtgctggagatc
aaggagggctggggcagcacggaatggagccagaagaccaagcaatggttgaacgacacc
caccaggtcaccctgatgctgatggggctcaactgcctcttcgatcccgtggtgtactgc
ttcgccaccaggaggttccacatgtatatcaaggaccatctgaaaaaggtggggaggggc
agagcctgctcggaaacagccatcacacacatctctatagtggaatgcaagaatgtgagc
cagcggctccatagcgaacagcagcagctcaataattaa
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