Oncorhynchus mykiss (rainbow trout): 110505397
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Entry
110505397 CDS
T07259
Name
(RefSeq) rho guanine nucleotide exchange factor 10 isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110505397
03036 Chromosome and associated proteins [BR:
omy03036
]
110505397
Membrane trafficking [BR:
omy04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110505397
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
110505397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
ARM_At3g06530
Beta-prop_RSE1_2nd
AAA_30
Motif
Other DBs
NCBI-GeneID:
110505397
NCBI-ProteinID:
XP_021440263
Ensembl:
ENSOMYG00000035674
LinkDB
All DBs
Position
25:14429730..14521794
Genome browser
AA seq
1455 aa
AA seq
DB search
MDIMEEFPLPPPEMLVDDVPYADEEEGEQFEFDDSGDEVPEADRLPPAPLAPDYGAQANG
VAPHPEPEGADPEHHLEGQPSNPDLPTATVDPTTATVATSLPVPATMATTDSAVVAAAEG
EKASTVPVPADQDSDLPPPPRSEDSSPVGTDSVDKEVSSDDPPPANPRTTSQKKVNPYSV
IDITPVQLQQLEQQHGLAPSSPVERVGGEDGDGQDVSPTSPPCVPPGYSVPVPCGYATPS
GVPLITPAYTTPIIIRHFSLDEDVTVVATCNTSVDSVFSEEYPAIREEDALSKWVSDPAN
TAWMENPDEVIYDDVPRENSDSTTEPDEMIYDDVEFGEEGCGSSLDNGWSSSEFESYDEQ
SDGEGQGENGLPDAFMRGKTPQKKTTHLSQDLTRLKEHYEKKMKDLMANTVGTVELQQIK
QKHEQKMQKLVKAARDGTKDGLEKTKAAVKRGRSFIKTKTHCHERKSTCFEGEESELFIE
VECFNMEPVLSPVPEGLSQQQVVRRCILGSILESEKTYLDALKRILEQYEKPLSEIEPRL
LSDRKLKMTFYRIREILQCHALFQIALACRVAEWDSLEMIGDVFVASFSKSMVLDAYCEF
VNNFSTAMAVVRKTCASKPSFLDFLKHRQDTSSDRVTLYGLMMKPIQRFPQFILLLQDML
RNTPVGHSDRLHLQMALTELETLAEKLNEKKRDADQRCEIRHIAKAMNERYLNKLLSNDS
RYLIRSDDMVETVCNDRGEVIKTKERRLFLLNDVLMCATPNVRCSVDGSGNVPPGQKFLL
KWSVPLSFVDVVEFGSSEEMGDNSRFTPQPHSGEKVVVNAKPNKLYMGPGQLYQDLQNLI
HDLSLVNQISSMIGSLKGNYQNVNPTVAHDWVSGLQRLILKKEEEIRAADRCRIQLQLPG
KQDNRSGRATNFSAVFNTFSPAIKQSWISNLQMAKLALEEDNLQGWFFAEDDGNQIKKQK
HPLLLRQMPVVMSKLQEFKVECAVHNPEPHINIGSTADTPALGHGCVWVASCTNQMGQIA
IVAMQNSSPKVTECFNVESRILCMAYVPMEQSTQENRMGNPENNLSLVGKASDNPTVCLG
MEEGSIIVYKSSQQSKKVRLQHFFILDKSTVTSLVHKKQCLYAGLVSGSVAIYSRAQDGL
WNPDSPKVLKLGVLPVKAMLAVEGHVWASSGGQVFIISTNTHTVERQLEAHQEEGMVVSH
MVVAGVGIWIAFSSGSTLRLFHTETLEPLQDINVATPVHNILAGNQRVSVSSLLVCHGLL
LVGTNLGVTVALSVPRLQGIPKVTGRGMVSFHAHHGPVKFLTMAAAVCNRPSGNSDSPGS
SPPSQPGDTQDGEASPPPPPGSTPSPAATQGRGVWLGEAGCSSMALHDSLSSSCGSLALS
QGSLEHGPEDGAIYDLVNDPANHQRGRRVKKVNVSSLLVVSGGLGHRRVNRKSKQSRQEE
TVSTIMVWQIPLLNM
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggacatcatggaagaattccctctcccacctcctgaaatgttggtggatgatgtgccc
tatgcggatgaagaagagggggagcagtttgaatttgatgacagtggggatgaggtccct
gaggcagaccggctgccccccgcccctctggcccctgactacggggcccaggccaatggt
gtggccccccacccagagccagaaggagcagaccccgaacaccacctagaggggcagccc
tcaaacccagacctcccgacagcgactgtggacccaactactgctacagttgcaacatca
cttccagttccagctaccatggccacaacagactcagcagttgtggctgcagcagaaggg
gaaaaggcttcaacagtcccagtcccagctgaccaagacagtgacctaccccctcctccc
cgttcagaggactcctctcctgtaggaacagactctgttgataaggaagtgtccagcgat
gaccctcccccagccaaccctaggaccacctcccagaagaaagtcaacccctactctgtg
attgacatcacccccgtccaactacagcagctggagcagcagcatgggcttgccccttcc
tcaccggttgagagggtgggaggagaggacggggatggacaggatgtttcacccaccagc
cccccctgtgtccccccgggttactctgtgcctgtgccctgtggatacgccaccccctct
ggcgtgccccttatcacgccagcctacaccacgcccatcatcatccgacacttctctctg
gacgaggacgttactgtggtggctacatgcaacacttctgtagacagtgtctttagtgaa
gagtatcctgccatcagggaggaggatgctttgtccaaatgggtgtcggaccctgcaaac
acagcctggatggaaaatccagatgaagtaatttatgatgacgtgcccagagagaactct
gattcaactacagagccagatgagatgatctatgacgatgtggagtttggggaggagggc
tgtggcagctccctagacaacggttggagctccagcgagtttgagagctacgacgagcag
agtgacggggagggccagggggagaacggcctgcctgatgccttcatgagagggaagaca
ccgcagaagaagaccacccatctttctcaagatctgacacgcttgaaagaacactatgag
aaaaagatgaaagatcttatggcaaatacagtgggaacggtagagctgcagcagattaaa
cagaaacacgagcagaagatgcaaaagctggtgaaggcagcgagagacgggaccaaagac
ggcctggagaagaccaaagcagcggtgaaaaggggacggtcgttcatcaagaccaaaacc
cactgtcatgagaggaagtcgacctgttttgagggtgaggagtcagagctcttcatcgag
gtggaatgcttcaacatggagccagtgctcagtcccgtccctgaggggctctcacaacaa
caggtggtgaggaggtgtatactgggctccatattagagagtgaaaagacctatctggat
gcactgaagcggattttagagcaatatgaaaagccactttcagagattgagcccaggttg
ctaagcgacaggaagctcaagatgacgttctatcgtattcgggagattctccagtgccac
gccctgttccagatcgccctggcatgccgcgtggccgagtgggacagtctggaaatgatt
ggggacgtctttgttgcctcgttctccaagtccatggtgctggacgcctactgtgagttt
gtgaacaacttcagcacggccatggcggtggtcaggaagacgtgtgcctccaaacccagt
ttcctggacttcctcaagcatcgtcaggataccagcagtgaccgggtcactctctatgga
ctcatgatgaagcccatccagagattccctcagttcattctgctgctgcaggacatgctg
agaaacaccccagtaggccacagtgacaggctacacctacagatggccctgacagagctg
gaaaccctggctgagaagctcaacgagaagaagcgggatgctgaccagcgctgcgagatc
agacacatagccaaggccatgaacgaacgctacctcaacaagctcctgagcaacgacagc
cgttacctgattcgctcagacgacatggtggagacagtctgcaacgaccgcggtgaggtc
atcaagaccaaggagcgacgcctttttcttctcaacgacgtgctcatgtgtgccacgccc
aacgtccggtgcagtgtggatggtagtggcaacgtccccccgggccagaagttcctgctg
aagtggagtgtccctctgagctttgtggatgtggtagagtttggctccagtgaggagatg
ggcgacaacagccgcttcaccccccaaccccactctggagagaaggtggtcgtcaacgcc
aagccaaataagctgtacatgggtccaggccagctgtaccaggacctgcagaacctcatc
catgacctcagcctggtcaaccagatctccagcatgatcggtagcctcaagggaaactac
cagaacgttaaccctacggtggcccatgactgggtgtcgggtctacagcgtctcattctg
aagaaggaggaggagatccgggctgcagatcgctgtaggatccagctgcagctgcctggc
aaacaggacaacaggtctggcagggccacaaacttttctgctgtgttcaataccttctct
ccagccatcaaacagtcctggatcagtaacctgcagatggccaagctggctctggaggag
gacaatctgcagggctggttctttgcggaggatgatggtaaccagatcaagaagcagaaa
catcctctcctgctcaggcagatgcctgtggtcatgtccaaactacaggagttcaaggtg
gagtgtgcggtccataaccccgagccccacatcaacatagggagcacagcagacacacct
gcactcggacacggctgtgtgtgggtggcgagctgcaccaaccagatgggtcagatagcc
atcgtggccatgcagaactccagccccaaggtgacagagtgtttcaatgtggagtctcgg
atcctgtgcatggcttatgtacccatggagcagagtacccaggagaataggatggggaac
cccgaaaataacctctccttagtggggaaggccagtgacaaccctactgtctgcctgggc
atggaggagggcagtatcatagtctataagagcagccagcagtccaagaaggtgcgtctc
caacacttcttcatcctcgacaagtccaccgtgaccagcctggtgcacaagaagcagtgt
ttatacgctggccttgtgagtggctcagttgccatctactccagagcacaagatggcttg
tggaatccagactctcctaaggtgctgaagcttggggttctgccagtgaaggccatgcta
gctgtggagggccacgtctgggcttcctctggaggacaagtcttcatcattagcactaac
acgcacactgtggagaggcagttggaggcccaccaggaggaaggcatggttgtatcccac
atggtggtggctggggtgggtatctggatagccttcagctctgggtccaccctcagactg
ttccacacggagaccctggagcctctacaggacatcaacgtcgctacgcctgtacacaac
atactggctggaaaccagagggtctctgtgagcagtctgctggtatgtcatggtctgctg
ctggtggggaccaacctgggggtgacagtggccctctctgtccctagactacagggcatc
cctaaggtcacaggacggggcatggtatctttccatgcccaccacggcccagtgaagttc
ctcaccatggcagccgccgtgtgcaaccggccctcaggcaactcagacagcccaggcagc
agcccacccagccagccaggggacacccaggacggggaggcctccccacctccaccccca
ggctccacacccagtcctgctgctactcagggccggggagtgtggctgggggaggcaggc
tgctcctccatggccctccatgactccctgtcctcctcctgtggctccctggctctgtca
cagggctctctggagcacgggcctgaggacggggccatctatgacctggtcaatgaccca
gccaatcaccagaggggcaggagggtcaagaaggtgaacgtcagctctctgcttgtggtg
tcgggggggctgggtcaccgcagggtcaacaggaagagcaaacagtcccgccaggaggag
actgtgtccaccattatggtgtggcagatccctcttctcaacatgtaa
DBGET
integrated database retrieval system
