KEGG   Oncorhynchus mykiss (rainbow trout): 110505437
Entry
110505437         CDS       T07259                                 
Name
(RefSeq) pre-mRNA-splicing factor syf2
  KO
K12868  pre-mRNA-splicing factor SYF2
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110505437
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110505437
Spliceosome [BR:omy03041]
 Complex B
  Other components
   Prp19-related factors
    110505437
 Complex C
    110505437
SSDB
Motif
Pfam: SYF2 AAR2_1st
Other DBs
NCBI-GeneID: 110505437
NCBI-ProteinID: XP_021440319
Ensembl: ENSOMYG00000043178
LinkDB
Position
25:16555521..16566788
AA seq 237 aa
MASCAEGSASVSYEPTESTASQKREERLRKFRELHFKRNEARKLNHKEVVEEDKRLKLPT
NWEAKKARLEWELMTDEKKKECAAKGEDYDRVKLLEISAEDAERWERKKKKKNPDPGFSG
YAEAQLRQYQRLTKQIKPDMDGYERQREQCGEDFHPTSNSLIHGTHVPSKEGIDRMVEDV
EKQIEKRAKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq 714 nt   +upstreamnt  +downstreamnt
atggcgtcctgcgctgagggatctgcttcggtcagttatgagccgaccgaaagtactgca
tctcagaagagagaggagagactccgaaaattccgggaactgcatttcaaaaggaatgaa
gcacgcaagctcaatcacaaggaggttgtggaggaggacaagagactgaagctgccaact
aactgggaggctaagaaagcccgtctggagtgggaactcatgaccgatgaaaagaaaaag
gagtgtgcggccaaaggggaggactatgacagggtgaaactgctagagatcagtgctgag
gatgctgagcggtgggagagaaagaagaagaagaagaaccctgacccaggattctcaggt
tacgcagaggcccagctgcgacagtaccagcgcctcaccaagcagatcaaaccagacatg
gacggctacgagaggcagcgagagcagtgcggcgaggatttccaccccacatccaacagt
ctgatccatgggacccacgtcccttccaaggagggcatcgaccgcatggtggaggatgtg
gagaaacagatcgagaagcgggccaaatacagccggcgtagggcctacaacgatgacgca
gacattgactacatcaacgagaggaacgccaagttcaacaagaaggcagagcggttctat
ggcaaatacacagctgagatcaagcagaatctggagagaggcacagctgtctaa

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