Oncorhynchus mykiss (rainbow trout): 110505437
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Entry
110505437 CDS
T07259
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110505437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110505437
Spliceosome [BR:
omy03041
]
Complex B
Other components
Prp19-related factors
110505437
Complex C
110505437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
110505437
NCBI-ProteinID:
XP_021440319
Ensembl:
ENSOMYG00000043178
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All DBs
Position
25:16555521..16566788
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AA seq
237 aa
AA seq
DB search
MASCAEGSASVSYEPTESTASQKREERLRKFRELHFKRNEARKLNHKEVVEEDKRLKLPT
NWEAKKARLEWELMTDEKKKECAAKGEDYDRVKLLEISAEDAERWERKKKKKNPDPGFSG
YAEAQLRQYQRLTKQIKPDMDGYERQREQCGEDFHPTSNSLIHGTHVPSKEGIDRMVEDV
EKQIEKRAKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctgcgctgagggatctgcttcggtcagttatgagccgaccgaaagtactgca
tctcagaagagagaggagagactccgaaaattccgggaactgcatttcaaaaggaatgaa
gcacgcaagctcaatcacaaggaggttgtggaggaggacaagagactgaagctgccaact
aactgggaggctaagaaagcccgtctggagtgggaactcatgaccgatgaaaagaaaaag
gagtgtgcggccaaaggggaggactatgacagggtgaaactgctagagatcagtgctgag
gatgctgagcggtgggagagaaagaagaagaagaagaaccctgacccaggattctcaggt
tacgcagaggcccagctgcgacagtaccagcgcctcaccaagcagatcaaaccagacatg
gacggctacgagaggcagcgagagcagtgcggcgaggatttccaccccacatccaacagt
ctgatccatgggacccacgtcccttccaaggagggcatcgaccgcatggtggaggatgtg
gagaaacagatcgagaagcgggccaaatacagccggcgtagggcctacaacgatgacgca
gacattgactacatcaacgagaggaacgccaagttcaacaagaaggcagagcggttctat
ggcaaatacacagctgagatcaagcagaatctggagagaggcacagctgtctaa
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