Oncorhynchus mykiss (rainbow trout): 110505525
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Entry
110505525 CDS
T07259
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1 isoform X2
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110505525 (exd1)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
110505525 (exd1)
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
110505525
NCBI-ProteinID:
XP_021440474
Ensembl:
ENSOMYG00000034613
UniProt:
A0A8C7T4X3
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Position
25:complement(19462760..19472995)
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AA seq
565 aa
AA seq
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MTMDDFQFMDSFKRKRIKLTLKTATFLGIVQRINANKTVILEDVVDVKNGRKFPGVKLFF
GHEILNVEFPNVTQSDRDNTSDHRPEGHLTVAEFQPYRKGLILNDDDDDESHVNFVVIDE
FHEKFGPAMMHIRKQQVIGIGADGVGTFQHERLCWLQIATKNKVYLFDILLLGARAFKNG
LSMILENNHILKVTHDCRSLAGCLMAQFGVNLTNVFDTQVADILCFYTETGGFLPDRVST
LPKVVSLHLKMSSSQLSSLNIKSLLTKEDKEVWYVRPCPLSLLKVMALSVIHLQPLRLVL
LDALMADYTGLVDSYLSGSREEPVHMQNIGSSSVLELPRELRELEHTRQKRQKWAVDRYP
VTEQGLLERSNPRPLPPSQNGQGQDTATQRQPDPPVPTAVAPVVPAPGQGPAETPCPSNT
LGASDLRALTQEAQQSYRKQPSGVVSPVAKSRAPGLLEIVMDTMAGRGRSLLKDPTPPIL
PVFPSLGRGLALPIPAAQVPKESPGALKTQAPVGRVEVPVPPGPRPSPVQPSENIPGAGR
GLIQKPQGLASPLSLSFSSFRKSHL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggacgactttcaattcatggatagcttcaagagaaagcgcatcaaattgacc
ctcaagactgcgactttccttggaattgttcagcggataaacgccaataaaactgtgatt
ttagaggacgttgtggatgtcaagaatggaaggaaattccctggagtgaaactattcttt
ggacatgaaattctcaatgtggaattcccaaatgtaacacagtctgaccgagataacacc
agtgaccacagacctgaaggtcacctgacagtggcagagttccagccttacaggaagggt
ctcatactgaatgatgatgatgatgatgagagccatgtcaactttgtggtcattgatgag
ttccatgagaagtttggtcctgctatgatgcacatccggaagcagcaggtgatcgggata
ggagctgacggggtcgggacgttccagcacgagagactctgttggctgcagattgccact
aagaacaaggtgtacctctttgacatcctgttgcttggagcccgggcctttaagaacggc
ctgtccatgatcctagaaaataaccacatattaaaggtcactcatgactgccggagcctc
gccggatgtctgatggctcagtttggagtaaatctcaccaatgtctttgacacacaggtg
gcagatatcctgtgcttctacacagagacgggtggcttcctgccagatagggtcagtacc
ctaccgaaggtggtgagcctacatttgaagatgtcctcgtcacaactctcctctctcaac
atcaagtctctgctcaccaaggaggacaaagaggtgtggtacgtgcgtccctgccctttg
tccctgctgaaggtcatggccctgtcggtgatccacctgcagcctctgagactggtgctg
ctggatgccctcatggctgactacacaggcctggtggactcctacctcagcggcagccga
gaggaacctgtccacatgcagaacatcggctcgagcagtgttctggagctgcccagggag
ctgcgggagttggagcacacgcgtcagaagcgccagaagtgggccgtcgaccgctaccct
gtcactgagcagggcctactggagcgctccaaccccagacccctacccccatcacagaat
gggcagggccaggacacagccacccaaagacaaccagaccctcctgtccccacagcagtg
gcgcctgtagtcccagcaccagggcagggcccagcagagacaccctgtcccagcaatacc
ctgggggcctctgacctccgtgccctgacacaagaggcccagcagagctacaggaaacag
ccgtctggagtcgtcagcccagtggctaaatcaagagcaccaggactcttggagatagtg
atggacacaatggcaggcagagggaggtccctgttgaaagacccaacaccacccattctc
cctgtgttcccctcactgggaagaggcctggctctcccgataccagcagcccaggtcccc
aaggagagccccggagccctgaagacccaggccccagtggggagggtggaggtgcctgtc
cccccaggcccaagacccagcccagtacagccatctgaaaacatccctggtgcagggaga
ggcctcatccagaaaccccaaggtctcgcctctcctctcagtctctccttcagttcattt
agaaagagccacctatga
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