Oncorhynchus mykiss (rainbow trout): 110505547
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Entry
110505547 CDS
T07259
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110505547 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110505547 (mlh3)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
110505547 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
110505547
NCBI-ProteinID:
XP_021440517
Ensembl:
ENSOMYG00000036407
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All DBs
Position
25:complement(20400012..20406260)
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AA seq
1268 aa
AA seq
DB search
MIKCLSKEVQGKLRSGIAIFSLQQCLEELILNSIDASATCVGVRVDIEAFKVQVIDNGSG
MDIEDMESVGNRYFTSKCSSLEDLDNLKFYGFRGEAVASIANLAMLVEISSRTKMSVKTH
VKVFKDGKGLDVFEAETTRPSAGTTVVICNFFHNMPVRRNRMDSVLEFERIRQRVEAISL
IHPSVSFTLKNDCTGTMVVQLSKARNTYYRFVQIHGLGRAQKLGEINHSHAQFEASGYVG
REGHYNNTLQFLYVNDRLLLKTRIHKLLNLLLRKVGSSSRQNDSPGTPPAIRSPKQRRGA
ELHAMYVINIMCHYSEYDICLEPAKTLIEFKDWESILFCIEEAVKAFLTRENLVSEISPE
DIQDYICKNVFSGQTASTDGVKDSIGKGAQTHMEGVTLECNVGKTLASELVHRRQIEGSD
KMNSVYQTCDGVESEQGDRVGKLRDKEVLTGFEQEQEYNTTNPQCRPSSVDTDQGLQYDS
ITDSSVMDSSESYKEVTKENESNEHLKSAISCPESSQHSLIFKTKEENLKMSIEEGTEMK
DNAREHVSLSRCTVRAPCTLTQGIQSEMGSIKQTLPQPQDTELNPGGHRNIFLSHPYIHS
SLPSQKCLSHQSRKGLALESREKLATKRKWPMVEGPGHLHVYNKESKDLPTGIPSKISTF
MSCQKLALYKEVGSLDRFRRIYGKLTKSNPVPVDVNSNYLAIDATASQTEHLVMNAKAVL
PYLEADQERDVTESRLDLMKDHKSPLTLSMFTKLKYLSARSSEISLATKLSHLKHQRTEV
ATSAFVHPPETTSNEDICPQDTVENNAILDINNGEQHNNTGRNRDFIPGCSTNPLPDEKE
ANNVTASCDWLHHYDDTVGKLVYINKVTGLSKYEAPSAEETQVSCTSDVTNMAISVISKK
GIEYRCYPFQMDLVLPFLPKSKSGRVLSSGPDNRDGIQDSNSLSSLYSEWTNPVFARPPM
VGVDISSVQAEGLAVKIHNILFPYRFSKDMIHSMKVIHQVDKKFLACLINTQDQEPVACS
ETDGNLLVLVDQHAAHERVRLENLVADSYEDDPETPGERRLCSSTVAPPLEVSVTEEELR
LLRSCRPSFRGLGLEMQFSQIGDPQVLVGKVPMCFTEKESNELRRGRRSIIKPIVEEYLQ
EQIELLRSTGRVRGTLPLTVLKVLASLACHGECYFLIQWSYCTLYTFLISVMAQTGAIKF
NDRLSKEECCSLVGALSSCQLPFQCAHGRPSIAPLVDVLHLNDQEEPPRPNLRKLRRMYK
AWELYGNR
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtgtttgtcaaaagaagttcaaggtaagcttcggtctggaatagcaatattt
tcattacagcagtgtcttgaagagcttattctgaacagtattgatgctagtgcaacatgc
gtgggtgtgagggtggacatcgaagccttcaaagtgcaggttatagacaatggctcaggg
atggacatagaggatatggagtctgtcggaaacagatacttcacaagcaaatgcagttct
ttagaggacctagataatctcaaattctatggattcagaggagaagctgttgccagcatt
gctaatctcgccatgctggtggagatatcatccaggaccaaaatgtctgtgaagactcat
gtgaaagtcttcaaggatggtaaaggcttggacgtgtttgaggctgagactacccgccca
tctgcagggacgactgttgttatttgtaacttcttccacaacatgccagtgaggagaaac
aggatggatagcgtgctggagtttgaacggatcaggcagagagtggaggccatttcactc
attcacccctctgtctctttcacactgaagaatgactgcacagggaccatggtggtgcag
ctctccaaagcccgaaacacttactacaggtttgttcagatccatggtttaggtagggcc
caaaagcttggggaaatcaaccactcccatgcacagtttgaagcaagcggttatgtagga
cgggaaggccactacaacaacaccttacagttcctctatgtgaatgacaggctacttctc
aaaacccgcatccacaagctgctgaaccttctcctacgcaaagtaggcagttcaagtcgg
cagaatgacagccctggtacacctcctgccattaggagcccaaagcagagaagaggagct
gagctacatgcaatgtatgtcatcaatatcatgtgccactactctgagtatgacatatgc
cttgagcccgccaagaccctgattgaattcaaagactgggaaagtattctgttctgcata
gaagaggcagtgaaagcattcctgacaagagagaacttggtgagtgaaatctccccagag
gatatccaggactacatttgtaagaatgtgtttagtggccaaacagctagcacagacgga
gttaaggactccattggaaaaggtgcccaaacacacatggagggtgttaccctggaatgt
aatgttggaaagacccttgcatctgaacttgttcatcgacggcagatagaaggctctgac
aagatgaatagtgtttatcagacatgtgatggagttgaatcagagcagggtgacagagta
ggaaaactaagggacaaggaggtccttacgggttttgaacaggaacaagagtataatacc
acaaacccacaatgtcgaccaagctcagtagatacagaccaaggtctacagtatgattca
attacagattcatcagttatggactcatcagagtcttacaaggaagttacgaaagagaat
gaaagcaatgaacatctgaaatctgctatttcttgtcctgaatcatctcagcatagtctt
atctttaagacaaaggaagaaaatctgaaaatgagtatagaagaaggaacagagatgaag
gataatgcaagagagcatgtatccctctcaagatgcactgtgagagcaccatgtactctc
actcagggaatccagtcagagatgggctctatcaaacagacactacctcaaccacaggac
acagaactgaatccaggtggacacagaaacatctttctatcacatccatacattcatagc
agtttaccctctcagaaatgtctctcccaccagagtagaaaagggctagcgttagaatct
agagagaaacttgcaacaaaacgaaaatggcctatggtggagggcccaggccatcttcac
gtttacaacaaagaaagtaaggaccttcccactggcatcccttcaaagatttctacgttc
atgtcatgtcaaaagctggctttatataaagaggttggatctctggacaggttcagaaga
atatacgggaagcttaccaaatccaatccagttcctgtcgacgttaatagcaattattta
gcaattgatgccacagcttcccagaccgaacacttggttatgaatgccaaggctgttttg
ccctatcttgaagcggatcaagaaagggatgtcacagagtcacgtctggatctgatgaaa
gaccacaaaagcccgttaacactctccatgttcaccaaactcaaatatctctcagctcgg
agcagtgaaatatctttggctaccaaactctctcatttaaaacaccaaaggacagaggtt
gcaaccagtgcatttgtacatccaccagagaccacttcaaatgaggatatatgtccccag
gacactgtagaaaacaatgctattctagacatcaataatggagaacaacacaataacact
ggccggaatcgtgacttcatcccgggctgcagtacaaatcctctgccagatgaaaaggaa
gcgaacaatgtcacagcatcatgtgattggctgcatcactatgacgacactgtggggaag
ctggtctacatcaacaaagtgacaggactcagtaaatatgaagcaccctctgctgaagag
acacaagtgtcttgcacgtcagatgtcaccaacatggcaatcagtgtcatctccaaaaaa
gggattgagtacaggtgttacccatttcaaatggatctagtcttgcccttccttcccaaa
tccaaatcagggagagttcttagttcagggcctgacaatagagatggcattcaggactct
aattcactgtcctccctgtactctgagtggactaaccctgtgtttgcacgacctcctatg
gttggtgtggacatatcaagtgtgcaagctgaaggactggctgtgaagatccataacatc
ctctttccataccgcttctccaaggacatgattcactcaatgaaggttattcatcaagtg
gataagaagtttcttgcatgtcttatcaacacacaagaccaagagcctgtggcctgcagc
gaaactgatgggaaccttttagtgttagtggatcaacacgctgcgcatgagagagttcgt
cttgagaatctagttgcagattcgtacgaggatgatccagagacaccgggggagagacgg
ctatgctcatccactgtagccccaccactggaggtcagcgtgacagaggaggagctgagg
ctgctcaggtcctgccggccatccttcaggggcctgggtctggagatgcagttctcgcag
ataggagatccccaggtcctggtggggaaggtgccaatgtgtttcacagagaaggagagc
aatgaactccgccgggggaggcgttccatcatcaagcccatagtggaggagtaccttcaa
gagcagattgagttactgcgttcaactggcagagtgcgagggacattgcctcttacggta
cttaaagtcctcgcctcccttgcatgtcatggtgagtgttattttctaattcagtggtca
tactgtactttgtatacgtttctcattagtgtcatggcccaaacaggtgcaatcaaattc
aatgaccgcctcagtaaggaggagtgttgcagcctggtaggcgctctatcttcatgccag
ctgcccttccagtgtgcccatggccgcccatccatcgccccgctggtagacgtccttcac
ttgaatgaccaagaggaaccacctagaccaaacctcagaaaactgagaagaatgtacaaa
gcctgggaactttatggaaatagataa
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