KEGG   Oncorhynchus mykiss (rainbow trout): 110505611
Entry
110505611         CDS       T07259                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110505611
Enzymes [BR:omy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110505611
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110505611
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 Prok-RING_4 zf-RING_4 zf-rbx1 zf-UDP RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_10 Rtf2 zf-RING_11 IBR_1 zf_RING_Vps8 zf-ANAPC11 Sina_RING Zn_ribbon_6 RNase_II_C_S1 zf-RING_6 TerY_C TRAF3_RING
Other DBs
NCBI-GeneID: 110505611
NCBI-ProteinID: XP_021440613
Ensembl: ENSOMYG00000022300
LinkDB
Position
25:complement(22030722..22042001)
AA seq 188 aa
MSEAEQDRIEIPDTRCSNNTNEGTADSSNTSHLETIEVQESSDPLVAEEEMVDLTHQVFP
SSFVDLTNNNDSIVVVDEGPKRRRDWESYVLSSDEEEAAVIVPDSPATAPLSTAPEPSST
ARSTPTTISCPICMDVFGEIIDGGRTLVSSQCGHLFCNTCIRDSLAKSQTCPTCRKKLNH
QQYHQIYI
NT seq 567 nt   +upstreamnt  +downstreamnt
atgagtgaggctgagcaagatagaatagagatccctgataccagatgctccaacaataca
aatgaaggcacagcagacagcagcaacacgtcacaccttgagaccatagaggtgcaggag
agcagtgatcccttggttgcggaagaggaaatggttgatttgacccatcaggtttttcca
tcatcttttgtggacctcaccaacaacaatgactcaatagtggttgtagatgaaggtcca
aagcgaagacgtgactgggaaagttacgtgctgagcagtgatgaagaagaggcagctgtt
attgttcctgacagtccagcgacagcccccctctccactgcccctgagcccagcagcaca
gccagatcaaccccaacaacaatcagttgtcccatctgtatggacgtgtttggagagata
attgatggtgggagaacgcttgtctcctcccagtgtggtcacctgttctgcaacacatgc
atacgtgactcacttgccaaatcacagacgtgtccaacctgcaggaagaaactgaatcat
cagcagtatcatcaaatttacatctaa

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