Oncorhynchus mykiss (rainbow trout): 110505622
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Entry
110505622 CDS
T07259
Symbol
six1a
Name
(RefSeq) homeobox protein six1a
KO
K15614
homeobox protein SIX1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110505622 (six1a)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
110505622 (six1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
110505622
NCBI-ProteinID:
XP_021440631
Ensembl:
ENSOMYG00000023542
LinkDB
All DBs
Position
25:complement(22498171..22500337)
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AA seq
284 aa
AA seq
DB search
MSILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENNNSGNNKQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSLLLLQGNMSH
PGVSSYPMTGLGGAQPLHGMHGHPHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatactaccttcgtttgggtttacccaggagcaagtagcctgcgtctgcgaggtc
ctgcaacaaggagggaatctggagaggctcggtcgttttctctggtctctcccagcgtgt
gaccacctccacaagaatgaaagtgtactgaaagcaaaggcggtggtcgccttccaccga
gggaacttcagagagctatataagatcctggagagccaccagttttccccgcacaatcat
cccaagctgcagcagctgtggctgaaagcgcactacgtggaggcggagaaattgcgcggc
cgaccgcttggagccgtggggaagtatagggtccgcaggaaattccctctgccccgcacg
atctgggacggcgaggagaccagttattgctttaaggagaagtcaaggggtgttctgaga
gagtggtacacgcataacccctatccctccccgcgagagaaaagggagctggccgaggcc
acgggactgaccactacgcaggtcagcaattggttcaaaaacagacgccagagagacaga
gccgcagaagctaaagaaagagagaacagcgaaaacaataactccggtaacaacaaacag
aaccagctgtctcccctcgacggcggcaagtcgctcatgtccagctcggaagatgagttc
tctccaccacaaagccctgatcagaactctttgcttttgctccagggaaatatgagtcac
cccggcgtctcctcttaccctatgaccggcctcggtggcgcacagccgctgcatggaatg
cacggacacccgcaccaactccaagactcgttgctgggacctctaacgtcgagccttgtg
gatctaggctcctaa
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