Oncorhynchus mykiss (rainbow trout): 110505639
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Entry
110505639 CDS
T07259
Symbol
brf1a
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit a
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110505639 (brf1a)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
110505639 (brf1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
A2L_zn_ribbon
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
110505639
NCBI-ProteinID:
XP_021440664
Ensembl:
ENSOMYG00000031659
LinkDB
All DBs
Position
25:complement(23267544..23331891)
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AA seq
671 aa
AA seq
DB search
MSSRVCKNCGGTDIDVDQARGDAVCVGCGSVLEDNIIVSEVQFMETGGGGSSAVGQFVAG
DASGRNPTFGEGLYTGVGRESRAQTLQNGRRQINTLGHQLQLNQHCLDTAFNFYKMAVCK
RLTRGRRVAHVVAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGRTFLVLARELCINAPA
IDPCLYIPRFAHMLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTIKEIISVVKVCEATLRKRLNEFEDTPTSQLTIEEFMKVDLDQECDPPSFIAGQRK
KRMKLLEEELEKKIDDVQGEIHEYQDEIEMELEQSRPKLRGMYASYAKPGPQEEEDDEIS
LPDGEEREDEELKAVAQHLNKELCDQVISGEEDGDGQEERPPRRGPSLASLLGPMPTAAS
LGLPESISKCIEEEKENDEDAENGELDLSGIDDDEIELYLLNDKEVKIKTELWLKQNEDY
LKEQKEKEERIAKEKELGIYKDKKPKTSKKRAPIHASTADEAIEKMLEQKKISTKINYDI
LKELNVKPCASPARQTAESPKGATPGAQRLTGRYRKPNNVPLSLGTPLSSLGKRLRPFIS
GHPPKKLALDQIAIPLPVASEVSPHSVLVESGPVVYDDVADEEEEDEEEPCVSAMELLGG
NEYGCDDDDGF
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagagtgtgtaagaactgtgggggcacagacatcgatgtggaccaggccaga
ggcgatgcggtgtgcgtgggctgtggctcggtcctggaggacaacattatcgtgtccgag
gtccagttcatggagacaggagggggcggctcctctgctgtgggacagtttgtagctgga
gatgcctctggaaggaaccccacttttggggaagggctctatacgggcgttggaagggag
tcccgggcccagaccctgcagaacgggagacgtcagatcaacacactgggccaccagctg
cagctgaaccagcactgcctggacacggccttcaacttctacaagatggccgtgtgtaaa
cgcctgacacggggccgaagggtggcccacgtggtggccgcatgcctctacctggtctgc
aggacggaaggaacacctcacatgctgcttgacctcagtgacctcctgcaggtaaatgtt
tacgtcctgggtagaaccttcctggtcctggccagagagctctgcatcaatgcccccgcc
atagacccctgcctgtacatccctcgctttgcccacatgctggaatttggagagaagaac
catgaggtgtccatgacagcactgcgactgctgcagaggatgaaaagggactggatgcac
acgggacggagaccctcaggactgtgtggcgcagccctgttggtcgctgctcgcatgcac
gagttccgccgtaccatcaaagaaatcattagtgtagtgaaggtgtgcgaggccacacta
cgaaagagattgaatgagtttgaggacacgcccaccagccagctgaccattgaggaattt
atgaaagtggatcttgaccaggagtgtgacccgccctctttcatcgctggccagaggaag
aaaagaatgaaactgcttgaggaagaattggagaagaagattgatgatgttcaaggtgaa
atccatgagtaccaggatgagattgagatggagctggagcagagccggcccaagttgaga
gggatgtacgcctcctatgcaaaacccggcccccaggaggaagaggacgatgaaatatct
cttcctgatggggaggagagggaggacgaggagctaaaggctgtggcccagcacctcaat
aaggagctgtgtgaccaggtgatctctggagaggaggatggagacgggcaggaggagaga
cctccacgcagaggcccatcactggcctccctcctggggcccatgcccaccgcagccagc
ctcggcctcccagagtctatcagcaagtgcatcgaagaggagaaggagaacgatgaggat
gctgaaaatggagagctggacttgagtggtattgatgatgatgagattgagctgtatctc
ctgaatgacaaagaggtgaaaatcaagactgagctttggctgaaacagaatgaagactac
ttgaaagagcagaaagaaaaggaagagcggatagcaaaagagaaggagctggggatttac
aaggacaagaagcccaagacctccaagaagcgggctccgatccatgccagcacagccgac
gaggccatagagaagatgctggagcagaagaagatctccactaagatcaactacgatatc
ctgaaggagctgaatgtcaagccatgcgccagtccagcccgccagacagcagagtctccg
aaaggagccacccctggagcccagaggctgactggacgataccgcaaacccaacaatgtc
cctctgagcctgggcacaccactcagcagcctgggcaagaggttacggcccttcatatca
ggacacccccctaagaagctggctctagaccagatagccatccccctgccagtggcctct
gaggtgtcgccccactctgtgctggtcgagagtgggcctgtggtctatgacgatgtggca
gatgaggaagaggaggatgaggaggagccctgcgtcagcgccatggagctgctgggaggc
aacgagtatggatgtgatgatgatgatggtttctag
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