Oncorhynchus mykiss (rainbow trout): 110505676
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Entry
110505676 CDS
T07259
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04080
Neuroactive ligand-receptor interaction
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110505676
04082 Neuroactive ligand signaling
110505676
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110505676
Ion channels [BR:
omy04040
]
Ligand-gated channels
GABA-A
110505676
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
110505676
NCBI-ProteinID:
XP_021440732
Ensembl:
ENSOMYG00000034072
LinkDB
All DBs
Position
25:24235278..24289662
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AA seq
486 aa
AA seq
DB search
MCTALDRGRWGIFCLFLMVAMVCGAQSANEQSNMSFVKATVDKLLKGYDIRLRPDFGGAP
VDVGMSIDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADSLWVPD
TYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWKGDNSVTGVENIELPQFSIIDYHIQSTKAVFATGSYPRLSLSFKLKR
NIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAQTNNENKSRLESNK
VQVDAHGNILLTNLEIRNEMGGMGGMAGMTGAEMIGALNDPRATMFSYDSASIQYRKPMA
SRDLYGRPALDRPVGHKKSRLRRRASQLKVKIPDLTDVNTIDKWSRVIFPIAFTFFNLVY
WLYYVH
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacggctttggaccgcggacgttgggggattttttgtcttttcctcatggtcgcc
atggtctgcggcgctcaaagcgccaacgagcaaagcaacatgtcatttgtgaaagcgacc
gtcgacaaactgctgaaggggtatgacattcgtctgaggcctgattttggaggtgcccct
gtggacgttggcatgagcatagatatcgccagtatcgacatggtttcggaagtcaacatg
gattacaccatcactatgtacttccagcagtcctggagggacaagcgcttgtcctacaca
gggattcccctcaacctgacactggacaacagggtggcagactcactctgggtccctgac
acctacttcatcaacgataagaagtcctttgtgcacggggtcacagtgaagaacagaatg
atccgacttcatcctgacggaactgtgctctatggcctcaggatcaccactactgcagct
tgcatgatggacttgcgtagatacccactggatgagcagaactgcaccctggagatcgag
agctatgggtacaccactgatgacatcgagttctactggaaaggtgataattcagtgact
ggggtggagaacatcgaactgccccaattctctataatagactaccacatccaatccaca
aaagcagtgtttgctacaggctcctacccgaggctctctctgagttttaagctgaagagg
aacattggctacttcatcctacagacctacatgccctcaaccctgatcaccatcctatcc
tgggtctccttctggatcaactatgacgcgtctgcggccagagtcgctttaggcataacc
actgtgctgaccatgaccaccatcaacacccacttgagagagactttgcccaaaatcccc
tacgtcaaggctatagacatctacctgatgggctgcttcgtgttcgtcttcctcgctctg
ctggagtatgcctttgtcaactacatcttcttcggacgggggcctcacttgcagaaaaag
gtggctgagaaagcagctcaaaccaataacgaaaataagagcagattggagagtaacaaa
gtgcaggtggacgcccacggcaatatcctcctgaccaatctggagatccgtaacgagatg
ggcgggatggggggcatggccgggatgaccggggctgaaatgataggggctctcaacgac
ccgcgggccaccatgttctcctacgacagcgccagcatacagtaccgtaagcccatggcc
agccgagatctgtacggtcgaccggccctcgaccggccagtcggccacaagaagagtcgt
ttgaggaggagggcgtcgcagctcaaagtcaagatcccagacctgacggacgtcaacacc
atagacaagtggtcccgtgtcatcttccctatcgccttcaccttcttcaacctggtctac
tggctgtactacgtccactag
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