Oncorhynchus mykiss (rainbow trout): 110505740
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Entry
110505740 CDS
T07259
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110505740 (pnn)
03015 mRNA surveillance pathway
110505740 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110505740 (pnn)
03041 Spliceosome [BR:
omy03041
]
110505740 (pnn)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110505740 (pnn)
Spliceosome [BR:
omy03041
]
Complex C
Other components
EJC/TREX
110505740 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
110505740
NCBI-ProteinID:
XP_021440829
Ensembl:
ENSOMYG00000015809
UniProt:
A0A8C7QA38
LinkDB
All DBs
Position
25:28099654..28106376
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AA seq
698 aa
AA seq
DB search
MMHCAERPVRGSLLAKMAVAVGSLQAQLEKAKESLKNVDDNIRKLTGRDPNELRPGQARR
PTIPGVGGRGRGINLLRRGLSDIGGGPGGPPAKQRDIEGALLRLAGDQRARRDSHHDSDA
EDDDDVKKPALQSSVVATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESN
VATDRQKKRIEIEQKLEVQAEQERKKVEGERRELFDERRAKQTELKLLEQKVELAHLQEE
WNVHNTKIVKYIRTKTKPPIFYLPGRMCSATQKLFDESQKKMNVMFEERCEAFAEYLNKM
EARPRRQSLRDNALGKDLKKEEQEEGKPTGQVVKATGNRFNVEMEDEATLEGDVGVKRKE
DRKKKPGERVREQAPKKVENEENGQDIRIIEFREVEEQMEVTAVVREAEWQVGDQDKKME
DSLVIGGAEVDNEKEAEQQQQVKVEKENKPLQNQDPTAVSDDQEKSFEMQPTEDEEPHTE
VSIPLLSEPNPSLEVSDGASIAPEVQIPLLEAGTEPLTTEQSQEADQGAMKQTVDVQPAQ
YDAAPKELEPLIGESSRGCGKSKSKDKKGDGRRSSSSSSSSSGSSSSGSSGSSSGSSSRS
SSSSGSSSSSSSSRSRSRGRKDRKHRRKSSERKSSERKKGGGDKSQKSSMASGRESKGSK
EKGSKSDRKRTSSEGCRSGKMSSRSDRDRKSDRKEKRR
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgatgcattgcgccgagcgacctgtgagaggaagcttgttagctaagatggcggtggca
gtagggtctttgcaagcccagcttgagaaagctaaagagagtttgaaaaatgtagacgat
aatatccgtaaattaactggccgggatcctaatgaattgagacctggccaagctagaagg
ccaaccatcccaggtgttggaggtaggggacgaggaatcaacttgttgagacgtggactc
tccgacattggtggaggacctggaggacccccagctaaacagagggacattgaaggggcc
cttctgaggctggccggtgaccagcgagcgaggagagattcacaccatgacagtgacgct
gaggatgatgacgatgtcaagaagccagcgttgcagtcatcagtagtagctacctccaag
gagcgtacgcgtcgagacctgattcaggatcagaccatggatgagaggggaaaacaaagg
aatcgacgcatgtttggcctgttgatgggaacgttacagaaatttaagcaggaatctaat
gtggcaacagataggcaaaagaaacgcattgagattgaacagaaattggaagttcaagct
gaacaagaacgcaagaaagtagagggtgaaagacgagagctctttgatgagaggcgtgcc
aagcagacagagctaaaactgttggaacagaaagtggagcttgctcacttgcaagaggag
tggaatgtgcacaatacaaaaattgtcaagtacatccgcacaaagaccaagccacccata
ttctatctgcctgggaggatgtgctcagccactcagaagctctttgatgagtcgcagaaa
aaaatgaatgttatgtttgaggagagatgcgaggcgtttgccgagtatctgaataagatg
gaggctcggcctcgacgccagtctctgagggacaacgctctgggtaaggacctgaagaaa
gaagaacaagaggagggtaagcccacgggtcaggtagtcaaagcgacaggtaatcggttt
aatgtggagatggaggacgaggcaacactagagggggatgtgggtgtaaagcgtaaggag
gacagaaagaaaaagccaggagagagagtcagggagcaggcacctaagaaggtggagaat
gaggaaaatggtcaagacattagaataatagagttcagagaggtggaagagcagatggag
gttactgcagtggtgagggaggctgaatggcaggtcggggatcaggataagaagatggag
gatagtttggtgataggtggggcagaggtagataatgagaaggaagcagaacagcagcaa
caggttaaggtagaaaaggaaaataagccgcttcagaatcaggaccccacagctgtgtca
gacgaccaggagaaaagctttgaaatgcaaccaactgaagatgaagagccacatacagaa
gtgtccatacccctgctctcagagcccaaccctagtctggaagtctctgatggagcatct
atagcccctgaggttcagatccccctgctggaggctggaacagagcctctcacaacagag
cagagccaagaggctgatcaaggtgcaatgaagcagactgttgatgtccagcctgcccag
tatgatgctgcccccaaggagctggagcctctgatcggggaatcaagcaggggatgtgga
aagtccaagtcaaaggacaagaagggagatggtcgtcgcagcagtagctcctcaagtagc
tcttctggctcctcgtccagcgggagctccggctcctctagcggctcctccagcaggagc
agctcctccagcggcagctcctcttccagctcctctagtaggagccgcagccgggggagg
aaggacaggaagcacaggaggaagtcgtccgagaggaagtcgtccgagaggaagaaggga
ggtggtgacaagagccagaagtcatccatggccagtggtcgtgaatccaaaggttccaaa
gagaagggctctaagtctgacaggaagaggaccagctctgagggctgccggtcagggaag
atgtcctctcgcagtgaccgggatcgcaagtctgataggaaggaaaaaagacgttaa
DBGET
integrated database retrieval system
