Oncorhynchus mykiss (rainbow trout): 110505791
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Entry
110505791 CDS
T07259
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110505791
04121 Ubiquitin system [BR:
omy04121
]
110505791
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
110505791
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Atypical E3
110505791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
110505791
NCBI-ProteinID:
XP_021440908
UniProt:
A0A060WNU5
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All DBs
Position
25:31287902..31290986
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AA seq
670 aa
AA seq
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MSSAHVSSSRRQSCYLCDLPRMPWAMIWDFTEAVCRGCVNYEGADRIEFVIETARHLKRA
HGFQEGRSPGPPPPPTVKTQAAISAKETVQINHVDGPSKQQQQQSGMDRYSLNAERPRFD
YSSIGAHASRLPNGMSGPNGFPKPDDGPPELNRQSPNSRRSHGLVAVPGQMNVPPNLLPQ
TMLNGPSSATAIASHSLSSRPPPSIVGPSLSTSSQSMSEQGKRPGSVSSTDQERDLKEKQ
RNAEALAELSESLRNRNEDWVNKPKIVRDTLLTLSNSSPFDVRFKKDHSLVGRVFAFDAV
SKPGMDYELKIFIEYPSGSGNVFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEKKHGS
GDWRLLGDLLPESVRFFKEGLGVEMLPQPYIDASCPLLPTALVNIPRGLPSASAPRIGVR
KRKASPEPDSAESALKLSEQEQQRQQWMASQSEALKLTMASGSFGTSHGAPPPLGPGHSV
HSSRATPPESTPQNGQSPMAALMSVADTLGNAHSPKDNNSVHSTTSTRHNSSSPVSPASV
SGQRRLASRNGELNLSGGPSQSNAHSGMDQVHAQNIPDSPMANNGPLCCTICHERLEDTH
FVQCPSVPNHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAG
DVKVKKERDP
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcacatgtatcctcatctcggagacagtcatgttacctgtgcgatttaccc
cgtatgccttgggctatgatttgggattttacggaggcagtgtgcaggggttgtgtgaat
tatgaaggtgcagatcggatcgagtttgttatcgaaactgcacgccacctcaaacgtgct
catggtttccaagaggggagatcccccggtccaccgccgccgcccacagttaaaacccag
gcggcaatatcagccaaggagacggtgcaaatcaaccatgtggacggaccatctaaacaa
caacaacaacagtcggggatggaccgctactctctgaacgcagagagacctcgctttgac
tactccagtattggcgcccatgccagcagacttccgaatggaatgagcggtccaaatggg
ttcccaaaaccggacgatggtcccccagagttgaaccgacagagcccgaactcccgtcgg
agccatggtctagttgcggtcccaggacaaatgaatgtcccccccaaccttctcccacag
accatgttgaatggaccctcctcggcaacagccatagcctcgcatagcctgtctagccgc
cccccaccatccattgtgggaccctctttgtccacgtcctctcagtccatgtcagaacaa
ggtaaacgaccaggttctgtgtcaagcactgaccaagagagagatctgaaagagaaacag
cgtaatgcggaggctttggctgagcttagtgaaagtttaagaaatagaaacgaagactgg
gtaaacaaaccgaaaatagtaagggacactttgcttactctttcaaacagctccccattt
gatgtgcgatttaaaaaggatcattcactcgtgggcagggtgtttgctttcgatgcagtg
tcaaagcctggcatggactatgaattgaaaatatttatcgagtacccaagtggatctggt
aatgtattttccagcgcatcgggggtggccaaacaaatgtatcaggactgcatgaaggac
tttggcagagggctctcctcgggttttaaatatttggagtatgagaaaaagcatggttct
ggggactggcgactcctgggtgatttgttgcccgagtcggtccgattctttaaagagggg
ctgggggttgaaatgttgccacagccctacattgatgccagctgtccattgctgcccact
gctttggtcaacatccctcgtggcttgccatctgcgagtgccccgaggattggcgtgcgt
aagcgtaaagcctccccagaacctgactccgcagagagcgcgctgaaactatctgaacaa
gaacaacagaggcagcagtggatggccagccagagcgaggcgttaaaactgacgatggca
tccggatcattcggtacctcacacggggcacccccaccgctcggccctggtcattctgtt
cactcaagccgcgctacgccccctgaatcaacgccccagaatggacagtctccaatggcc
gcgctcatgtctgtcgcggacacgttgggcaatgcgcactccccgaaggacaacaactca
gttcactccaccacatccaccaggcataacagcagcagcccggtctcgcccgcctctgtt
tcggggcagaggcgtttggcttcccgaaacggagagctcaatctatctgggggtccctcc
cagtccaatgcacattctggcatggatcaggtccacgcgcaaaacattccagattcgccc
atggctaacaacggacctctgtgttgtaccatttgccacgaacgtttagaggatacccat
ttcgttcagtgtccgtcagttcccaaccataaattctgtttcccttgttcccgagagagc
atcaaagcgcagggagcaactggcgaggtgtattgtcctagcggagaaaaatgccccctg
gtaggttctaatgtgccttgggcgttcatgcaaggtgagatagcaacaatattagctggg
gacgttaaggtaaaaaaggagagggacccatag
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