Oncorhynchus mykiss (rainbow trout): 110505825
Help
Entry
110505825 CDS
T07259
Name
(RefSeq) spectrin beta chain, erythrocytic
KO
K27409
spectrin beta, erythrocytic
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110505825
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110505825
Intermediate filaments
Intermediate filament-binding proteins
110505825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
DYH2-5-8_CC
Ribonuc_L-PSP
Alp7A_like_C
Motif
Other DBs
NCBI-GeneID:
110505825
NCBI-ProteinID:
XP_036818858
Ensembl:
ENSOMYG00000036607
LinkDB
All DBs
Position
25:complement(34774884..34893972)
Genome browser
AA seq
2371 aa
AA seq
DB search
MTSTTDFDNVEITQQYSRINTRFELLEEELDNDNSSARLFERSRIKALADEREAVQKKTF
TKWVNSILSRVSCRISDLYLDLRDGRMLIKLLELLSGEKLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIVVEMGQADGTQRESRTAK
DALLLWCQMKTAGYPNVNITNFTTSWKDGMAFSALIHKHRPDLVDYSGLKRSNPTHNLQN
AFNVAEQTLGVTKLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKALAVEGKRVGKVLDH
AIETEKMIDKYETLSSDLLTWIQQTIMILNNRKLANSLTGVQQQLQSFNSYRIVEKPPKF
QEKGNLEVLLFTIQSRMRANKQRVYTPKEGALVADLNRAWEHLEWAEHERERVLRDELIR
QEKLEQMARRFDRKASMRETWLLENQRLVAQDNFGYDLPAVEAAKKKHDAIETDIAAYEE
RIQGIVAISKELESERYHDTKRIDVRKDNILRLWDYLQELLKARRARLDKNLTLQRIFQE
MLYIINWMDGMKARLLSPDFGKHLLEVDDLLQKHALVEADITVQAERVHDSNAAALKFAN
RDSYKPCDPQVIKDRVQHLDLCYQELCALAAQRRARLEQSRRLWNFFWEMAELESWIKEK
EHIFSSLDYGKDLTSVLVLQSKHSAFENELGARRAHLQQILDEGDKMIQARHFGAPQVGD
CMEDVRRQWQQLEELAAFRRQNLQDTQRFFQFQGEAEDLKAWLLDAKRQMTSDDMGHDEY
TTQRLLKRHRDLRNDVARNGATIDALTKQAAALPEELRNTPDIQRRLKDIRDLYMELMSL
CDLRQRKLDDAMALYTIFSETDSCELWMGQKETWLVGLDVPENLEDLEVVQNRLSILASD
MANVQTRVDDVNKAVKQLEDSRHPCTKEVKECQLRLNKRWEAFKAMVVDKKRKVDSALSY
HNYGLECDETEAWIRDKTRVIKSTQDLGNDLNAVMTIQRKLYGMERDLAAIEDKLNFLRS
EADQLAKDHPDNAADILFRRAELDAAWDNLRATLKDREDSLGEVSKLQTFLQDMDDFQSW
LFKTQKAVASEDLPETLPQAEQLLNLHDDVYDEMDAHEEDYHKVRDTGVAVTQGQLDDPQ
YKELDKRLKGLDCGWDELHKMWDSRKGFLDQGLGFQLFMRDTKQVETILNNQEYTLAHTD
KHATLGGAEQALKKHEDFVCTMDANMEKLASTLEGGQRLVDSGNLYSPRVQDKMDSIHDR
YNKNRGKANEVTGILKDNRDLQHFLQNTQDLTLWINEKMLTAQDVSYDGDRNLHTKWKKH
QAFMAELASNKDWLNKIDQEGQELMDSKPDFEPIVTVRLARLHELWDKLESTAEDKARLL
FDANRSELFDQSQADMKKWLAELQKELQGDDEVKDLTNANILLKKHQQTENHVRDRAREL
EDLQEAVQKHGGPAGSREDQPELEAEQQAIQRDFQQLLTPLAQRRGKLEAAKAVHQFYRD
LADEILWVEERLPLAMSDEHGSNLQTVQLLLKKNQTLQREMKGHQPRVEEVLERGRRMAS
AATEEGGPEAERIGEQVKELKEVWARLQEEMAKRRDRLNGSNRAHQYYNDADEAEAWIGE
QELYMIADDKAKDEQSAMLMSKRHLIVKQAVDVYSDSIQKLSDRAQKMLNEDHPNGESII
RRQGQVDKQYAGLKDLAEERRRKLDHVYHHFLLSREVEDLEHWIAERDVVASSQEMGQDL
DHVTILRDKFRDFSRETGMVGQERVDYVNQTIDELIKAGHTEAAAMADWRDSVNESWADL
LELIDTRVQLLQASHDLLKYFDDGKELVSQIQEKLNEIPADLGEDFSKADTFHRMHAAFE
RDISALGKQVQQFQETAARLHAQYAGDQATEIQAQEKDVVEAWKALLDACDGRRKRLEET
ADKFRFFTMVRDLMAWMESTIQQIETQEKPRDVSSVELLMKYHQGIRAEIDQRGPKFSDC
VAHGKALLACKHKYSAEIKEKLIQLMEKKKEMMTKWDDRWDWLRLLLEVCQFARDASVAE
AWLVAQEPYVASKDLGQTINEVEKLLKRHEAFEKSTATWEERFSALERLTTLELLELRKQ
QQEIQQFVTEEQKRSQMESRREDTGFAEDSSQLYTIEEQTLSASGAVEVEPSLGQLEGTA
GDSTVPMVSEMQDASSLELLDASVSGQTPREGEPRAATLPADPLSPKAVLQEGMLGRKHD
LEAAGKKASNRSWNNLYCVLKPGQLSVYKDAKSFGHGSTYHGEDPLSLGNAKWEVLNNYK
KKKHVFILRLGDGSEYLFQCKDEEELGRWTQAIEKAVKPLAQEEAEPSGSAGVRARSLPP
PSSSTTLTTPEPAKDKKDKEKKGFSRFANKK
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccacggactttgacaatgttgagatcactcagcagtacagccgcatcaac
acacgcttcgagctgctagaagaggagctggacaatgacaacagctctgcaagactgttt
gagaggtcacgcatcaaagccctcgcagatgagcgtgaggcggtccagaagaagaccttc
actaagtgggtcaactccatcctgtcccgggtcagctgtcgtatctctgacctgtacctg
gacctcagggatggacgcatgctcatcaaactactggagctcctctctggagagaaactg
cccaagcccactaagggccgtatgcggatccactgtctggagaacgtggacaaggccctg
cagttcctcaaggagcagagggtccacctggagaatatgggatcacacgacatcgtcgac
ggcaaccaccgcctcatcctgggactcatctggaccataattctcagattccagattcaa
gacattgtggtggagatgggacaggcagacgggactcaacgggagagccgcacagccaag
gacgctctgctactctggtgccagatgaagactgccggatatccaaacgtaaacatcacc
aacttcaccaccagttggaaagacggaatggcgttcagcgctctcatacacaaacacagg
ccagacctggtggactatagtggcctgaagaggtccaatccaacccataaccttcagaat
gccttcaatgtagcagagcagacgcttggagtaacaaaactgttagaccctgaagatgtg
ttcacagagaacccagatgagaagtccatcatcacatatgttgtggctttctaccactac
ttctccaagatgaaggcattagcggtggaggggaagagagttggcaaggtactagaccat
gccatagagacagagaagatgattgacaagtacgaaaccctgtcgtcagacctgctgaca
tggatacagcagaccatcatgatcctgaacaaccgtaaactggcaaactctctgaccggg
gtccaacagcagctccaatccttcaactcctaccgcatagtggagaaaccacccaagttc
caggagaaaggtaatctggaggtgctgctgttcaccatccagagtcgtatgagagccaac
aagcagagagtctatacccccaaggagggggctctagtggctgatctcaacagggcctgg
gagcatttggagtgggctgagcatgagagggaacgtgtcctgagagacgagctgattcgt
caggagaaactggagcagatggccagacgcttcgacaggaaggcttccatgagagagacc
tggctactggagaaccagagactggtggcacaggacaactttggctacgacctgccggcg
gtagaggccgctaagaagaagcacgacgccatcgagacggacatcgctgcctacgaggaa
cgcatccagggcatagtagccatctccaaagagctggagtctgagcgttaccacgacacc
aagcgcatcgacgtgcgtaaggacaacatcctgaggctgtgggattacctacaggagctg
ctgaaagctcgcagggcacgactggacaagaacctcaccctgcagaggatcttccaggag
atgttgtacatcatcaactggatggatgggatgaaggctcggctgctctcccctgacttt
gggaagcacctgttggaggtggatgacctgctccagaagcatgctctggtggaggccgac
atcactgtgcaggcagaaagagttcacgactccaacgcggctgctctcaagtttgccaat
agagatagctacaagccctgtgacccccaggtgattaaggaccgggtgcagcacctggac
ctgtgttaccaggagctgtgtgcccttgcggcccaacgccgcgctcgccttgagcagtcc
cgacgcctctggaacttcttctgggagatggccgagctggagagctggatcaaggagaaa
gagcatatcttctcgtcgctggactacggcaaggacctgaccagtgtgctagtcctgcag
agcaaacacagtgccttcgagaacgagctgggggctcgccgtgcacacctgcagcagata
ctggatgagggtgataagatgatccaggccagacactttggggcaccacaggttggggat
tgcatggaggacgtgaggcgtcagtggcagcagctggaggaactggcagcgttcagaagg
cagaacctccaggacacccagaggttctttcagttccagggagaggctgaagacctgaag
gcctggctgctggatgccaagaggcagatgactagtgatgacatgggccatgatgagtat
accacccagaggctgctgaagagacaccgagacctccggaacgatgtcgccaggaacgga
gccaccatcgatgctctgaccaaacaggcggcggcgctacccgaggagctgcgcaacacg
cctgacatccaaagacgcctgaaggacatcagagacctgtacatggagctgatgtccctg
tgtgacctgaggcagaggaagctggatgatgccatggccctctacaccatcttcagtgag
acagactcctgcgagctgtggatgggccagaaggagacctggttggtggggctggacgta
ccggagaatctagaggatctggaagtggtgcagaacaggttgagtattcttgcttcagat
atggctaatgtccagacgcgtgttgatgatgtcaacaaagcagtgaagcagcttgaggac
agcagacacccgtgtaccaaagaggtgaaggaatgccagttgagacttaataagaggtgg
gaggccttcaaggccatggttgtggacaagaagcgtaaggtggattcagctctcagctac
cacaactatggactggagtgtgacgagacagaggcctggatcagggacaaaacccgggtc
atcaagtctacccaggacctgggcaatgacctgaacgctgtgatgaccatccagaggaaa
ctctacggcatggagcgggacctggctgccatcgaagacaagctcaacttcctgaggagc
gaggcggaccagctggccaaggaccacccagacaacgctgcagacatcctgtttaggaga
gccgagctggacgcagcctgggataacctgagggccaccctgaaggaccgggaggactct
cttggagaggtgtccaaactgcagaccttcctacaggacatggatgacttccagtcctgg
ctcttcaagacccagaaggccgtggcatccgaggacctgcctgagaccctgccccaggct
gagcagctgctgaacctccacgatgatgtatatgatgaaatggatgctcatgaggaggac
taccacaaggtgagggacacgggcgtggcggtaacccagggccagctggacgaccctcag
tacaaggagctggacaagaggctgaagggtctggactgcggctgggacgagctccacaag
atgtgggacagcaggaagggcttcctggaccagggcctgggcttccagctgttcatgagg
gacaccaagcaggtggaaaccatcctcaacaaccaggagtacactttggcccacacagac
aagcacgccaccctgggtggagccgagcaggccctaaagaagcacgaggactttgtctgc
accatggacgccaacatggagaagcttgccagcacgcttgaggggggacagagattggtg
gacagtgggaacctctactcccccagggtccaagacaagatggactccatccatgacagg
tacaacaagaaccgaggcaaagccaacgaggtgacagggatcctcaaggataaccgtgat
cttcaacacttcctgcaaaacactcaggatctgactctgtggataaacgagaagatgttg
actgctcaggacgtgtcgtacgacggagacaggaaccttcacaccaagtggaagaagcat
caggccttcatggctgaactggcctccaacaaagactggctcaacaagatagaccaggag
ggtcaggagctgatggactccaaacctgatttcgagccaatcgtgacggtgcgtctggcc
aggctgcatgagctgtgggacaagctggagtccactgccgaggacaaggcccgtctgctg
tttgatgctaaccgctccgagctgtttgaccagagtcaggctgacatgaagaagtggttg
gctgagctgcagaaggaactacagggagacgacgaggtcaaggacctcaccaacgccaac
atcctgctcaagaagcaccagcaaacagagaaccacgtgcgtgaccgagccagggagctg
gaggatctccaggaggctgtccagaagcatggtggcccggccgggagcagggaggaccag
ccggagctggaggctgagcagcaagccatccagagggacttccagcagctcctcaccccc
ctggcccagcgcaggggcaagttggaggcagccaaggccgtgcatcagttctaccgggac
ctggctgatgagattctctgggtagaggagaggttgccccttgcgatgtcagatgaacat
ggcagcaacctccagacggtccaattgctgttgaagaagaaccagacgttacagagggag
atgaagggccaccagccgcgggtggaggaggtgttggagcgtggccggaggatggcatca
gccgctacagaggagggcgggccggaggcagagcgtattggagagcaggtgaaggagctg
aaggaggtgtgggccaggctacaggaggagatggctaagaggagagaccggctgaatgga
tctaaccgggcccatcagtactacaacgatgctgacgaggcagaagcctggataggagag
caggaactctacatgattgctgatgacaaggccaaggatgagcagagtgccatgttgatg
tcgaagcgtcacctgatagtgaagcaggctgtagatgtctactcagactccatccagaag
ctgtctgaccgtgctcagaagatgctgaatgaagaccaccctaatggtgaatctatcatc
cgtcgccagggccaggtggataaacagtacgctggtttgaaggacttggcagaagaacgc
aggaggaagctggaccatgtctatcatcacttcctgctgagccgagaggtggaggatctg
gagcactggatcgctgagagggacgtggtggcctcctcacaggagatgggacaggacctg
gaccatgttacaatcctgagggacaagttccgtgacttttcccgggagacagggatggtg
ggacaggagcgggtggactatgtgaaccagacgatagatgagctgatcaaggcgggccac
acggaggctgctgccatggctgattggagggacagcgtcaacgagagctgggctgacctg
ctggaactcatagacacccgagttcagctcctacaggcctcccacgacctgctcaagtac
ttcgatgatgggaaggagctggtgtctcaaatccaggagaaactaaatgagattcctgct
gacctgggagaagacttcagcaaggcagataccttccaccgcatgcacgccgccttcgag
agggacatcagcgccctgggaaaacaggtgcagcagttccaggagacagcggcccgtctg
cacgcccagtatgctggggaccaggctacagagatccaggcccaggagaaggacgtggtg
gaggcctggaaggctcttctggatgcctgtgacggccgcaggaaacgcctggaggagaca
gctgacaagttccgcttcttcaccatggtccgagacctgatggcctggatggagagcacc
atacagcaaatagagacacaggagaaaccacgggatgtgtcatcagtagagcttcttatg
aagtaccaccaggggatcagggctgagatcgaccagcgtggaccaaagttctctgactgt
gtggcgcacggcaaggctctgctggcatgcaaacacaaatactctgctgagatcaaggag
aaactgatccagctgatggagaagaagaaggagatgatgaccaagtgggacgaccgatgg
gactggctcaggctcttgttggaggtgtgccagtttgcgcgggatgcctcagtggcggag
gcgtggctagtggctcaggagccatacgtggccagtaaggacctgggacagactataaac
gaggtggagaaactactgaagagacacgaagccttcgagaagtccactgccacctgggag
gaacgcttctcagccctggagagacttactacgttggagctgctagagttgaggaagcag
cagcaggagatacagcagtttgtaacagaggagcagaagcgttcacagatggagagcagg
agagaagacacaggatttgcagaggattcctcccagctctacaccatcgaggagcagaca
ctgtctgcctctggagcagtggaggtggagcccagtttgggtcagttggagggaacagcg
ggtgactctacagtgcccatggtctccgagatgcaggatgctagctctctggagctgctg
gatgcctctgtgtcaggacagacccccagggagggggagccccgggccgccaccctacct
gctgaccccctcagccctaaggctgtgctgcaggagggcatgctgggacggaaacacgat
ctagaggctgctgggaagaaggcttccaacaggtcctggaacaacctgtactgtgtgctg
aagcctggtcagctgtctgtctataaggacgccaagagcttcggccatggctccacctac
cacggagaggaccctctgtcgctcggcaacgccaaatgggaagtcctgaacaactacaag
aagaagaagcatgtattcatactgaggctgggtgatggtagtgagtacctgttccagtgt
aaagacgaggaggaactggggcgttggacccaggccatagagaaagcagtgaagcccctg
gcacaggaagaggcggaaccctcagggtctgcaggggtccgggcccgcagcctgccccct
ccttcctcttctaccaccctcaccacaccagagccagcgaaagacaagaaagacaaggag
aagaagggcttcagtcggtttgccaataaaaagtga
DBGET
integrated database retrieval system
