Oncorhynchus mykiss (rainbow trout): 110505863
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Entry
110505863 CDS
T07259
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110505863 (stxbp5b)
Membrane trafficking [BR:
omy04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110505863 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
110505863 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_Prp19
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
EIF3I
Lgl_C
Beta-prop_EML
PEP5_VPS11_N
WD40_like
Synaptobrevin
KNTC1_N
RAB3GAP2_N
WDR54
Motif
Other DBs
NCBI-GeneID:
110505863
NCBI-ProteinID:
XP_021441002
Ensembl:
ENSOMYG00000044027
LinkDB
All DBs
Position
25:complement(36839408..36891866)
Genome browser
AA seq
1176 aa
AA seq
DB search
MKKFNIRKVLDGLTASSSGTASPQPGTNQNDVIQETLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQSGAVRLFGRAGVECYCQHDSGAAVIQLQFLVNEGALVSALADDSVHL
WNLRQKQPAILHTLKFNRERITFCHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMWN
KAIELSSKSHPGPVVHISDNPMDEGKILIGFECGTVVLWDLKCKKADYRYNHDEAIHSVA
WHHEGKQFTCSHSDGTLTTWNVRVPAKPTITITPHGKQPKDGKKPEPCKPILKVEYKTTR
AGDAFVVMSGGLSYDTGCRRSCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLEQIGYPIFENPYPLSIHESPVTCVEYFADCPPELIPALYSVGSRQK
RQGYSKKEWPISGGNWGQGTLSYPEIIVTGHADGSIKFWDASAIMLQVLYKLKTAKVFEK
APKGSKEEKPSTEIVDEDPFAIQTLSWCPASRMLCVAGVSAHVIIYRFSKQEMTTEVVQL
LEVRMQGELNDVDSPDPAGDHPPTPSTPVPPSSSSPTQEGEPPEAQPFTSDDRPRDNGPG
LKVWSAPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVSSSDGLVVFGNSSGLAVVDYLQ
KSLLLNMSTSELYSPSDPYQRQPRSPRKTRQPSGDKDIPPVTSCMSRLSIFYTSMKKTYH
SSNSPLSDNSDGNNISEEKSSKSPTSGSTTPTNSDDEHKQKRFIEMVKSKSRRFSKTVAN
DFAKMSKKISSPTEQKTGLDAKDSSFSRSRSSSVTSIERESREAISSFHFSESFPRKTDS
SPSPSLWLGTTQGTVLVLSLSLPPTGDQRLQQPVGVSSCGTLVRLKGGILTMAFLDSLGA
VLPPSYEPWSEPNAPDEEKTRRRRPASPPPTQEGQDSQYAVVCSEKQAKVVGLPSQSCFF
KHNITESSFVLRADVVQMAAGLCLACFCANGHIMTLSLPSLRPLLDVNYLPLTDMRIART
FCFSNLGQAMYLTSPTEIQRITYSQETCDNLQEMMGELFTPLETPEAPNRGFFKGLFGGG
AQSLDREDLFGETAAGKASRSLAQHIPGPQGMEGMKGAASGVVGDLARARIALDERGQKL
GELEDRTAAMMASADSFSKHAHDMMLKYKDKKWYQL
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaatatcagaaaagtgctggacggcttgactgcttcttcctctggcact
gcatctccacaaccaggaactaatcaaaacgatgtgatccaagagacgctacaatcggag
cattttcagctctgcaagactgtgcgccatggctttccctaccagccctcctccatggcc
tttgaccctgtgcaaaaaattctggccatcgggactcagagcggagctgtgagacttttt
ggccgtgcgggtgtggagtgttactgtcagcatgacagtggtgcagctgtaatccagctt
cagtttctggtcaacgagggggcgctggtgagtgccttagctgatgacagcgttcacctg
tggaacctgaggcagaagcagccagctatcctgcacactctcaaattcaatcgggagagg
atcacgttttgtcacctgcccttccagagtaaatggctgtacatcggcacagagaaagga
aacatccacatcgtcaacgtggagtccttcacactgtcaggctacgtcattatgtggaac
aaagccatcgaactgtcctccaagtcacaccctgggcctgtggtccacatcagtgataac
cccatggatgagggaaagattttgattggatttgaatgtgggaccgtggtgttgtgggat
ctgaaatgcaaaaaagctgactaccgctacaatcatgatgaggccatccactcagtagcc
tggcaccatgagggaaaacagttcacctgcagccactcagatggaactctgaccacatgg
aatgtacgtgtccccgccaagcctacaatcaccatcacaccacacggtaagcagcccaag
gatggaaagaagccagaaccatgtaaacctatcctcaaagtggagtataaaacgactaga
gctggggacgccttcgtggtcatgtctggaggcctgtcctatgacacggggtgcaggagg
tcctgtctgacggtgatgcatgggaagagtactgctgtcctggagatggactatcccatc
gtagacttcctcacgctctgtgaaacaccatatcctaatgatttccaggagccttatgct
gtagttgtcctcttggaaaaggatttagttgtcatcgaccttgaacaaattgggtaccca
atatttgagaacccgtaccctctgtcgatccacgagtctccagtgacgtgcgtggagtac
tttgctgactgccctcctgaactcatacctgcactttactctgtgggctcccggcaaaag
agacagggttacagtaagaaggaatggcctataagtggtggtaactggggccaaggcaca
ctgagctaccccgagatcatcgtcactggacatgctgacggatcaatcaagttttgggat
gcttctgcaataatgctccaagtactgtacaagctgaagactgccaaggtgtttgagaag
gctccaaagggcagtaaggaggagaagccgagcacagagatagtggatgaggatcccttt
gccatccagactttgtcgtggtgcccagcgagcagaatgctgtgtgtggccggagtctcc
gcccacgtcatcatctataggttcagcaaacaggaaatgaccacagaggtggtgcagctg
ttggaggtgcgtatgcagggtgagctgaacgatgtggattctccagacccagcaggagac
catcctcccaccccatctaccccagtacccccctcctcctccagccctacccaggaggga
gagccccctgaggcccagcccttcacctctgatgaccggcccagggataacggaccaggc
cttaaggtctggagcgcccctctgaagcagtctcctggttaccaggtggagctggtcatt
caactggtctgggttagtggggagccgccgcagcagatcaccagcctggccgtcagctcg
tcagacggacttgtggtgtttggcaacagcagcggtctggctgtcgtggactaccttcag
aagagcctcctcctgaacatgagcacgtcagagctgtacagtccctcagacccctaccag
agacagcctcggtcgcctcgcaagacacgccagccatctggagacaaagacattccgcct
gtgacatcttgcatgtcccgcctttctatattttatacgtctatgaaaaagacctatcat
tcttctaactcccctctcagtgataacagcgatggaaacaacatttcagaggagaaaagc
agcaaatcaccaacgtcaggctctacgacacccaccaattcagacgatgaacacaaacag
aaaaggtttatagaaatggtgaagtccaaaagcaggcgcttttccaagacggttgccaat
gactttgccaagatgtcaaagaaaattagctcacctacagagcaaaagacaggcctggat
gccaaggacagttcgtttagccgctcgaggagttccagtgtgaccagtatagagcgggag
tcccgcgaagcaatctcctccttccacttcagtgagagtttccccaggaagacggacagc
agccccagccccagcctgtggttgggtactacccagggcactgtcctggtcctctccctc
agcctgccacctacaggggaccagaggctgcagcaacctgtcggagtctcttcctgtggt
actctggtcagactaaaaggaggtatcctgactatggccttcctggactcccttggggcg
gtcctacccccttcctacgagccgtggtccgagcccaacgctccagacgaggagaagacg
aggaggcgcaggccggcctccccaccccccacccaggagggtcaggacagccagtacgct
gtggtgtgctcagagaaacaggccaaggtggtgggtctgccctcccagtcctgcttcttc
aaacacaacatcacagagagctccttcgtgctgagagctgacgtggtgcagatggccgct
ggactctgcctcgcctgcttctgtgctaatggacacatcatgactctgagtctacccagt
ctcagaccactcctggatgtgaactaccttcccctgacagacatgaggatagcccggacc
ttctgcttctccaacctgggccaggccatgtacctcacctcccccaccgagatacagagg
atcacatacagccaggagacctgcgacaatctgcaggagatgatgggagagctgtttaca
ccgttagagacacctgaagctcctaatagaggcttcttcaagggcctgtttgggggagga
gctcagtcgctggatagagaagacctgtttggtgagactgcggcgggtaaggcatctcgt
agcctggcgcagcacatccccgggccccagggcatggagggtatgaagggagcagcctct
ggggtggtgggggacctggcccgtgccaggatagccctggatgagagggggcagaaactg
ggtgagctggaggacagaaccgcagccatgatggccagcgctgactccttctctaaacac
gctcatgatatgatgctgaagtacaaagataagaagtggtaccagctctga
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integrated database retrieval system
