Oncorhynchus mykiss (rainbow trout): 110505915
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Entry
110505915 CDS
T07259
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110505915 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110505915 (capn3a)
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
110505915 (capn3a)
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C2: calpain family
110505915 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
CAPN13-like_C_EFh
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
110505915
NCBI-ProteinID:
XP_036819004
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All DBs
Position
25:44466629..44540551
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AA seq
714 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLSKPLRFSGQDFTALKQECLTKKCLFEDDTFPASV
ESLGYKELGHKSNKVKNIVWRRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQDQSYSEGYGGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SMMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEESQHKASKVRLVRLRNPWGQVEWNG
PWSDNSKEWVSLSKGEKDQLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDDKIH
KWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQFRLCLLEEDDDSEDNEVACSFVVSLMQK
NRRKERKLGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFNSSKARCKSYINLREVTQRF
RLSPGEYVIIPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHTVPAPANAGEESEED
QQFRSLFQQIAGDVSTEMEVTANELKNVLNRVVSKHKDLNTEGFSLECCRSMIALVDVSS
MDGTGRLSLQEFRHLWNKIKQWQGIFRHYSSDQAGIINSYEMRNAINDAGFRLNNQLYDI
ITMRYANEGMNIDFDSFISCLVRLEAMFRAFQAFDQDGTIRLSVLEWLQLTMYA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgccctatacaccgtccggcttcttctgtgaccggctgatccgggagagagagagaaga
gatggagaaggatccctcagcaagcccctgcgcttcagcgggcaggactttaccgcactc
aaacaagagtgcctcaccaagaagtgcctgtttgaggatgacaccttcccagcctccgtg
gagtctctggggtacaaggagctgggacacaagtccaacaaggtcaagaacatcgtctgg
aggagacccaaggagatctgtgagaaccctcagttcattgtgggcggagccagcaggaca
gacatttgccagggagaccttggtgactgctggctgctggctgctatagcctgtctgact
ctgaatgagaagcttctctaccgggtcgttcctcaggatcagagctactccgagggatat
ggaggaatctttcacttccagttctggcgctatggcgactgggttgacgttgtcattgac
gaccgcatccccaccttcaacaaccagctggtgttcaccaagtctgctgagaggaacgag
ttctggagcgccctgctggagaaggcctacgccaagcttcacggttcctatgaggccctg
aagggcggtaacaccacagaggccatggaagacttcaccgggggcgtgacagagttctat
gagatgaaggaggcgcccaaggagctgtacaagatcatgaagaaggccctggagagaggc
tctatgatgggctgctctatcgattccctggttcctgctcgtttcgagacgcgcacagtg
actggccttgtgaagggccatgcctactctgtgactgccgtcgaggagtcccagcacaaa
gcgtctaaggtgcgtctggtgcgcctcaggaacccctggggtcaggtggagtggaacggg
ccctggagtgacaactctaaggagtgggtgtctctgtctaagggagagaaggaccagctc
cagcatcagagtgctgaggatggggagttctggatgtcctttgaggacttcaagaagaac
tacaccaagattgagatctgcaacctgacccctgatgccctggaggacgataagatccac
aagtggacggtgtctgtgaacgagggtcgttgggtcagaggctgctctgccgggggctgc
aggaactacccagatacattctggaccaaccctcagttccgcctgtgtctcttggaggag
gatgatgactcagaggacaacgaggtggcgtgttcctttgtggtctctctgatgcagaag
aacagacggaaagagaggaagttgggagccaatctcttcaccatcggatttgccatctac
gaggtgccgaaggagatgcacggcaacaagcagcacatgcagaaggacttcttcctgttc
aactcatccaaggctcgctgcaagtcctacatcaacctgagggaggtgacccagcgcttc
cgtctgagccccggggagtacgtgatcatcccgtctacctacgagcctcaccaggaggga
gagttcatcctcagagtcttctccgaaaagaggaacacctcagaggagatagagaacagg
atcgaggctgaccatacagtgccggccccagccaatgcgggggaggagagtgaagaggac
cagcagttccgcagcctctttcagcagatagccggggatgtgagtacggaaatggaagtt
accgccaacgagctgaagaatgtcctcaacagggttgtctccaaacataaggacctgaac
acagagggttttagcctggagtgctgcaggagcatgattgcactcgtggacgtatcctct
atggacgggactggcagactcagcctgcaggagttcagacatctctggaacaagatcaaa
cagtggcaggggatctttagacactacagctcggaccaggctggtatcatcaacagctac
gagatgagaaatgccatcaacgatgcaggcttccgtctcaacaaccagctgtatgacatc
atcaccatgcgttacgccaacgagggtatgaacatcgactttgacagcttcatcagctgt
ctggtccggctcgaagccatgttcagggccttccaggcttttgatcaggatggtacgatc
agacttagtgtcttggagtggctccagctgaccatgtatgcctag
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