Oncorhynchus mykiss (rainbow trout): 110505952
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Entry
110505952 CDS
T07259
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110505952 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110505952 (trip13)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
110505952 (trip13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
Viral_helicase1
AAA_24
AAA_18
AAA_14
AAA_25
TIP49
NPHP3_N
AAA_5
ATPase_2
NACHT
ATPase
AAA_28
RNA_helicase
TsaE
Cytidylate_kin
RuvB_N
ABC_tran
AAA_17
AAA_33
AAA_RNF213_4
AAA_30
bpMoxR
AAA_11
AAA_7
IstB_IS21
SLFN-g3_helicase
DUF815
Rad17
AAA_19
NB-ARC
DUF6393
Mg_chelatase
PduV-EutP
nSTAND1
YKL104W-A
AAA_3
PhoH
Sigma54_activat
nSTAND6
NTPase_1
Motif
Other DBs
NCBI-GeneID:
110505952
NCBI-ProteinID:
XP_036792177
LinkDB
All DBs
Position
2:6378373..6389788
Genome browser
AA seq
426 aa
AA seq
DB search
MEGDRMEVGDLKQNPNDTNNIHVEVHVKSTSTAKRSDVKMHVLTLLNRHRMVFGAFRWTE
FDEDFLIKHVQSVAIVDAERKPIDLKSCSLSIHIFTLNDDGPSTLNLEEEEELSAANHWL
LPAAEFHGIWESLVYESRVKTQLLDYVSTTIYFSDKNVDSNLISWNRVVLLHGPPGTGKT
SLCKALAQKLSIRLSNRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQLIDDKQAL
VFVLIDEVESLTAARKASQAGTEPSDAIRVVNSVLTQLDQIKRHPNVVILTTSNVTEKID
LAFVDRADIKQYIGPPSVEGIFNIYLSCLEELMKCQIVYPRQPLLTMFELETMGFRESKV
SELSLVLRDIAIKSKGFSGRALRKLPFLAHALFVKTPTVALERFLEAMDLAVDKQIEERD
NLVNCL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgacagaatggaggtaggggatctgaagcagaaccccaacgacacgaacaac
atccatgtggaggttcacgtcaaatctaccagcactgccaagaggtctgacgtgaagatg
cacgtcttgaccctgctgaaccgtcatcggatggtgttcggggccttcaggtggacagag
tttgacgaagacttccttatcaaacacgtccaatcagtggccatagtggacgctgagaga
aaacccatagatctgaagagctgcagtctgtccatccacatcttcaccctgaatgatgac
gggcccagcactctgaacctggaggaggaggaggagctctctgcagccaatcactggctc
ttaccagccgctgagttccatggcatctgggagagtctggtctatgagagcagggtcaaa
acacaactcttggattacgtctcaaccacaatttacttctctgacaaaaacgtggacagc
aacctgatctcatggaaccgagttgttctgcttcatggacccccgggcacagggaagacg
tctttgtgtaaagctctggcccagaagctgtcaatccgactttcgaaccggtactcttac
gggcagtttgttgagatcaacagccacagtttgttctccaagtggttctctgagagtggg
aaactggtcactaagatgttccagaagatccaacagctgatagatgacaagcaggctctg
gtgtttgttctcattgatgaggtggagagtctaacggcagcgcggaaagcctcccaggcc
ggaacggaaccctcagacgccatccgagtggtcaactctgtcctcacacagctggaccag
atcaagcggcatcctaatgttgtgatcctgaccacctccaacgtgacagagaagatagac
ctggcgtttgtggacagagctgacatcaagcagtacattggccctccgtctgtagagggc
atcttcaacatctatctgtcctgcctggaggaactgatgaagtgccagatcgtgtacccc
agacagccactgctgaccatgtttgagctggagaccatgggcttcagggagagcaaggtg
tcggagctcagcctggttctcagggacatcgccataaagagtaaaggttttagtggcaga
gcgctgaggaaactaccctttttggcccatgctctttttgtgaagactccgacagtggcc
ctggagaggttcctggaggccatggacctggcagtggacaaacagatagaggagagggac
aacctggtcaactgtctgtga
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