Oncorhynchus mykiss (rainbow trout): 110505971
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Entry
110505971 CDS
T07259
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110505971
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110505971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110505971
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
SR proteins
110505971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
110505971
NCBI-ProteinID:
XP_036818462
UniProt:
A0A8C7VX59
LinkDB
All DBs
Position
25:42095077..42101228
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AA seq
334 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREVNLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGGGGGGGGRFSPRFSSYRQGSGDRRGGGGGGSSRYG
PPVRTEHRIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTNKNEGVVEFASHSDMKNAL
DKLDGTDLNGRKLKLSEDRKSRRSRSRSRGSRSYSRSRSRSRSPRSKSPSRSRSRNRSRS
PRSASRTPEKKPSSGGGGGGRAAHRSTSRSPSRSKSRSRTPPARSRSPAPRSRTPPPRSR
SPAPRSRTPPPRSRSPAPARKPSRSRSPSVESQH
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgagtgtttatcggtcgtttgagccctcatgctcgtgagcgggacgtg
gagaagttcttcaaaggttatggaaggatccgggaagtaaatttgaagaacggattcggc
tttgtggagtttgacgaccacagagacgctgatgatgcagtttacgagctgaatggcaag
gaactctgtagtgaaagggtgactatagagcatgctcgctccagaagagggaggggtggt
ggacccgggatgggcggcggaggaggaggaggaggacgtttctctcctcgtttcagcagc
taccgccaggggtctggtgatcgccgcggtggaggtggcggaggctccagtaggtatggt
cctccagtgcgcactgagcacagaatcatcgtggagaacctgtcgtcgcgcatcagttgg
caggacctgaaagatctcatgaggaaagttggagaggtcacctttgtggatgcccaccga
accaacaagaatgaaggggtggtggagttcgcgtcacacagtgatatgaagaacgccctt
gataagctggacggaacagacttgaatggacgaaagctgaagctgtctgaggatcgcaag
agccgccgcagcaggagtcgttcccgtggctctcgcagctactcccggtcccgtagccgt
tcccggtccccccgttccaagtcccccagccgcagcaggagccgtaatcgctccaggagc
ccccgctctgccagccgtactccggagaagaagccttcctcaggaggaggaggagggggc
agggctgcacatcgctccacttcacgttccccctcccgttccaaatctcgttcccgtacc
cctcccgcacgttcccgctcccctgccccccgttcccgtacccctcccccacgctcccgc
tcccctgccccccgttcccgtacccctcccccacgctcccgttctcctgccccggcccgg
aagccgtcccggtctcggtccccctcggtggagagccagcactga
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