Oncorhynchus mykiss (rainbow trout): 110505984
Help
Entry
110505984 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110505984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110505984
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110505984
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110505984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
110505984
NCBI-ProteinID:
XP_021441134
UniProt:
A0A8C7W1D5
LinkDB
All DBs
Position
2:6685900..6688012
Genome browser
AA seq
415 aa
AA seq
DB search
MADVPVPPSSLRTEGILLREIHVNLLECKVCFEKYNPRQKERRPQNLSCGHVLCLECVRA
LSHPVLEKLECPFCRQLCDVDSTSHCQALTDLQDLLLSRSPRSPVPHRVRGGSGWVGGLG
SGALRLRSAFGGWGSLINPTGVAVFGSTGTLVVVHDGERRVVVFGPQGRRLHGFGRRGRG
HGEVCHPVDVAVTPSGYVVVTDAGDGAVKVFTSRGSYVLAVWDSFQMPWGVDVDSCGHIL
VTDIQAGTLSQVVVDFARGVTLMNRAVITDLQRPKAVACCRVTGNIALVETLGLTTTQPP
NGPRPTRLTIFNKDFNVLSQIDSFTLSLGASVWPCMSAVAFDRDGDVIVIDSQRGLIWSL
GKLQNGPVLTPLVSGDLVRPVGLVATAQNTLIVLDSGDHAVKMYSVHSDAILVQK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgttcctgttcctccttcctcactgagaacagaggggatcctcctgagagag
atccacgtcaacctactggagtgtaaagtctgcttcgagaagtataacccacggcagaag
gaacgccggcctcagaacctgtcctgcggccatgtactctgtctggaatgtgtccgggcg
ctctcccaccccgtcctcgagaagcttgagtgccctttctgccggcagctgtgtgacgtt
gacagcacctcccactgccaggcgctgacagacctccaggatcttctgctctcccgctcc
cccaggtcacctgtccctcatcgggtcagaggaggcagcggctgggtcggaggtctgggc
tctggagctctgcggcttcgctcagccttcgggggctgggggtccctgatcaaccccacg
ggggtggccgtgttcgggtccactgggaccttggtggtggtgcacgatggagaaaggagg
gtggtggtattcgggcctcagggcaggcggctgcacgggtttgggcggaggggtcgcggt
cacggggaggtgtgtcacccggtggatgtggcggtgactcccagcgggtatgtggttgtg
acggatgccggtgacggtgcagtgaaagtgttcacctccagggggagttatgttctggcg
gtgtgggactccttccagatgccctggggggtggacgtggacagctgtggacatatcctg
gtcactgacatccaggccggcacgctctcccaggtcgtggtggactttgcccgtggcgta
actctgatgaaccgagcggtcataaccgacctccagcggcccaaggcagtggcctgctgt
cgggtgacggggaacatcgccctggtggagacactggggctcaccaccacacaacctcca
aatggcccccggcctaccagactgacaatattcaacaaagactttaacgtgctctctcag
atagacagctttactctgagcctgggggcctccgtgtggccctgcatgtctgccgtggcc
tttgacagggacggggatgtgatcgtgatagactcccagcgtgggttgatttggagtttg
ggaaagctccagaacggcccggtcctaacccctctggtcagtggagacttggttcgcccg
gtggggctggtcgccacagcacagaacacgctgattgttttagacagtggagaccatgca
gtgaagatgtattcagttcactcggatgctattctagtccaaaaatga
DBGET
integrated database retrieval system
