Oncorhynchus mykiss (rainbow trout): 110506001
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Entry
110506001 CDS
T07259
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110506001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110506001
Spliceosome [BR:
omy03041
]
Complex A
U1 snRNP components
U1 related factors
110506001
Complex B
110506001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
110506001
NCBI-ProteinID:
XP_036818494
LinkDB
All DBs
Position
25:43110612..43152565
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AA seq
854 aa
AA seq
DB search
MSYPPHLNRLPQLPPGICPPQFAGFPQGVPAGTPMIPVHMGIMTSAPAVMVPTTVSMVQM
PPGPRKDLNPVRVKENQDGGSGDPTTTVFVGNISEKASDMLVRQLLAKCGLVLSWKRVQG
ASGKLQGKNKTAFGFCEYKEPESTLRSLRLLHELLLGDKKLLVKVDAKTKAQLEEWKARK
RNANGGAKSEDGPKEEEDEEEVLDEDTKRRDHIVKGAIEGLIREYGSELNAPSQDGDNQP
RKKKREKKEEEDINVMDMEDDKRDLISREISKFRDTHKKLEEEKGKKEQERQEIDKDRRE
RDKERERERERRDREREKEREKEKERNDNNNKERERDRDRERIDRDRERTRERERGDRGE
RERVKERSREVSIDRSRSRERSRDEKKHDREEDQEEAYERRKLERKMRDKETAYQERLKN
WEMRERKKTRDYDKENQREDERRREMTKEGKRLKEFLEDYDDDKDDLKYYRGSALQKRLR
DREKETELDERDRKREKEEHDQIRQRLLAEGHPDPEAELQRMEEEAERRRQPPVKPVPEE
EVQQEKPNRDREHREREHREREHREREHHRDRRGADRPSLQHLQPQSDDDLEEGEELDDC
DREDSSDARPNPNLKPTMRPITSAPSVSSGSGGATPNSPGNESPCGIIIPHENSPEARPT
EEQHPKIGLSLKLGASPNHQIHTGSKRKKLANVDSVFNKFGEEEADEAPRKRKLVPLDYG
EDDKSLGLDGAEVPGGKGGQNTEEKRKHIRSLIEKIPTARPDLFNYPLDWTAVDSTLMER
RIRPWINKKIIEYIGEEEATLVDFVCSKVMSHGTPQGILDDVAMVLDEEAEVFIVKMWRL
LIYETEAKKIGLGK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacccccctcacctgaaccgcctcccccagttgccccccgggatttgccctccc
caattcgcggggttcccccagggagtcccagcaggtacgcccatgattccagtccacatg
gggattatgacctctgcgcccgctgtcatggttcctaccacagtgtctatggtccagatg
cctcctggccctaggaaggatctgaacccagtccgagtcaaggagaaccaggatgggggc
agtggagaccccaccaccacagtgtttgttgggaacatctccgagaaggcttcagacatg
ctggtcagacagctgttagcgaaatgtggcctggtcctgagctggaagagggtccaaggg
gcttctgggaaactgcaaggtaaaaacaaaacagcgtttggtttctgtgagtacaaggag
ccagagtccaccctgcgttcccttcgtctgctacatgagctgttgctgggagacaagaag
ctgctggtcaaggtggatgctaagaccaaggcccagcttgaagaatggaaggctaggaag
aggaacgccaatgggggagccaagtctgaggacgggcccaaggaagaagaggacgaggaa
gaggttcttgacgaagacacaaagcgtcgtgaccacatagtgaaaggggcgatcgagggg
ttgatccgggagtacggcagtgagctcaacgccccttctcaggacggagacaaccagccc
cgcaagaagaagagagagaagaaagaggaggaggacatcaatgtgatggacatggaagat
gacaaaagagacctgatatccagagagatcagtaaattcagagacactcacaagaaactg
gaggaggagaagggaaagaaagagcaggaacggcaagagatcgataaggacaggagggag
agggacaaagagagggagcgagagagggagcgccgggaccgcgagagggagaaggagaga
gagaaggagaaggaacgaaacgacaacaacaacaaggagagagagcgggaccgggatcga
gaacgcatcgatcgggaccgtgaacggacgagggagagggagaggggagacagaggagag
agggagcgcgtgaaggagaggagtcgagaagtcagcatagaccgcagtagatccagagaa
cggagccgcgatgagaagaaacacgaccgcgaggaggatcaggaggaggcgtacgaacgc
aggaaactggagaggaagatgagggacaaggagactgcctaccaggaacgtctgaagaac
tgggagatgagagagaggaagaagactcgggactacgacaaagagaaccaacgagaggac
gagagacggcgtgagatgaccaaagaaggcaagcgcctgaaagagttcctggaagattat
gacgatgacaaagacgacctgaaatactacaggggtagtgctttacagaagcgtctgaga
gaccgtgagaaggagacggagctggatgagagagacaggaagcgggagaaggaggagcat
gatcagatcagacagagactgttagctgagggacacccagaccctgaggccgagctgcag
aggatggaggaggaggcagagcggaggcggcagcccccagtgaagccggtgccagaggag
gaggtgcagcaggagaaaccaaaccgggacagggagcaccgggagagggagcaccgggag
agggagcaccgagagagggagcaccacagggacaggagaggagcagacaggccttctctc
cagcaccttcaaccccaatcagacgatgacttggaggaaggggaggagcttgatgattgt
gaccgggaggactcatcagatgccaggccaaacccaaacctgaagcccacgatgcggcca
ataacatcggccccctcggtgtcgtcgggcagcggcggcgccacacccaactcccccggc
aacgagtctccgtgcggcatcatcatccctcatgaaaattctcctgaagcccggcccact
gaagaacagcatcccaagattggcctcagcctcaaactgggcgccagccccaaccatcag
atccacactgggagtaaacgtaagaagctggccaacgtcgacagcgtcttcaacaagttc
ggcgaggaggaggccgacgaagcgcctcgtaaacgtaagctggttccgctggactacggc
gaggatgataagagcttgggtctggacggggcagaggtacccggagggaagggaggacaa
aacacagaggagaaacggaaacacatcaggagtctcattgagaagatccctacggccaga
ccggatctgtttaactaccctctggactggactgctgtggactcgactctgatggagcgc
cgcatcaggccctggatcaacaagaagattatagagtacatcggagaggaggaagctacg
ctagtggactttgtctgttcgaaggtgatgtctcacggcacaccgcaggggatcttggat
gatgttgccatggttctggacgaggaggcagaggtgttcatagttaaaatgtggaggctg
ttgatctacgaaacggaggccaagaagattggtctggggaaatga
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