Oncorhynchus mykiss (rainbow trout): 110506004
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Entry
110506004 CDS
T07259
Symbol
vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110506004 (vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110506004 (vti1b)
Membrane trafficking [BR:
omy04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
110506004 (vti1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Fusion_gly
DUF2264_C
Motif
Other DBs
NCBI-GeneID:
110506004
NCBI-ProteinID:
XP_036818493
Ensembl:
ENSOMYG00000037355
UniProt:
A0A8C7TIH3
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All DBs
Position
25:43060008..43073929
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AA seq
226 aa
AA seq
DB search
MSSEEFEKLQEIFKSLYDELKLMPDRLLKCQGEEKKRLVRTFDERHGEAVEVLQGMEQEL
IGVPSSYRNAMSTRLRLFRRDLGKLQREVKSSDLSSTSSTRPAEGAYGIYSSQNEHSTQL
QSQRALLIQGHEHLNNASQSIERSQRIAAETDQIGVDIIEELGEQREQLDRTRDRLVNTG
ENLSRSRKILRAMSRRLMTNKLLLSVIILMELVILGAVVYLKFFRK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggaagagtttgaaaagctgcaagagatcttcaaatccctttatgacgaactg
aagttgatgcctgacagattactgaaatgtcaaggagaggagaagaagaggttggtgcga
acttttgacgaaagacacggagaggccgtggaagtgctgcaggggatggagcaggagttg
atcggtgttccctcgtcctaccggaacgccatgtccaccaggctgcgtctgttccgcaga
gacctggggaagctccagagagaggtgaagagctctgacctgtcctccacctcctctacc
cggccagcagagggcgcctacggcatctactcctctcagaacgaacacagcacccagctt
cagtctcagagggccttgctgatccagggacacgagcacctgaacaacgccagtcagagt
atagagaggagtcagcgcatcgccgccgagacagaccagatcggcgtggacatcatcgag
gagctgggagagcagagagaacagctggaccgcaccagagacaggctggtcaacactggg
gagaacctcagccggagcaggaagatcctacgagccatgtctcgacgactgatgaccaac
aagctgttgttatctgtcatcattctgatggagctggtcatactgggtgcagtcgtctac
ctcaagttcttccgcaagtag
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