Oncorhynchus mykiss (rainbow trout): 110506138
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Entry
110506138 CDS
T07259
Name
(RefSeq) selenocysteine insertion sequence-binding protein 2-like isoform X1
KO
K19539
selenocysteine insertion sequence-binding protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110506138
03012 Translation factors [BR:
omy03012
]
110506138
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110506138
Translation factors [BR:
omy03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
110506138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
Poxv_Bcl-2-like
Motif
Other DBs
NCBI-GeneID:
110506138
NCBI-ProteinID:
XP_036820433
LinkDB
All DBs
Position
26:40449635..40485487
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AA seq
1201 aa
AA seq
DB search
MDSCDKDVKLSAEVEPFIPQKKGLEGALVTMSLSGGEGGGGVEPTPIPSYLITCYPFVQE
NQPNRQQHPMYSGGGDLRWQQPNPSPGGPYLAYPILSSPQPPVSNDYTYYQIMPAPCPPM
MGFYQPFPGTYAGPLQPGVVNPISADVSERPAPLGQAFGLANQRGGRGMVRPAVLPKSMF
YQQQQVGLCQSLRARRPPMRTVAVQKEVCSSGPDGRTKTVLLVDAAQQTDFPGDNACGRG
ASERERASPLLWKNLPRRRRASHPAESSSEADIDSDSGYCSPKHNQQAPGVTQHNAHAAI
APTGVDAGVMTAVSWVNVASQASQRPWSDNRTTPFQRTGKTPDQRNYSQQDFHTGYSGGR
VCSNPTPADSNGGLQQRRLQPGLGPGTVLAPEPLYFEDEDEFPELVSGGAQRNIKPDPNP
SQNQHQTKLTKNLLENLPENSPINIVQTPIPITTSVPKRAKSQRKKALAAALATAQEYSE
ISMEQRKLQEALTKAAGKKSKTPVQLDLGDMLAALEKQQQAMKARQITNTKPLSFTGTHC
THTPHTHTPHHTPVQLDLGDMLAALEKQQQAMKARQITNTKPLSFTGTHCTHTPHTHTPH
HTPVQLDLGDMLAALEKQQQAMKARQITNTKPLSFTVGTAAPFHGSGPGAGSGAGSGIVS
MLKAQQAHSAPLNMLDSSAPRLKRGKEREIPKVKRPTALKKIILKEREGKRGKGGVDQIA
ASQEEQGEEELHFTDDLTREPASQEENGLSVPSDDASLSPASQNSPYSITPVSQGSPGSS
GIGSPMASNAITKIHSRRFREYCNQVLNKEIDESVTMLLQELVRFQERVYQKDPSKAKTK
RRLVMGLREVTKHMKLHKIKCVLISPNCEKIQAKGGLDEALYNVIAMAREQEIPFVFALG
RKALGRCVNKLVPVSVVGVFNFSGAEGLFNRLVSLTEDARKSYKDMVSALEQEQAEEALK
NVKKVTHHMGHSRNPSAASAISFCSVISEPISEVNEKEYETNWRSMVESSDGLEPVEAKP
SHPAASSGLQRDNQPPSTTTNRSPYSTTLQLRAPVPAPGSGPGEREEGRADDRLELASQQ
STETGSLDGSCRDLLNSSITSTTSTLVPGMLEEAEEEEEEEEEYTPEPISVEVPAVISRI
ESWVSKTLENLQLGKSQDSTEEEEEEEEEEEGVQSEEEEELDSADVTETGLEKMEANNIT
G
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggactcttgtgataaggatgtgaaactgtcagccgaagtggagccgtttatccctcaa
aagaaaggtctggaaggagcgctggtcaccatgagcttgtctggaggagaaggaggaggg
ggggtagagcccaccccaatccccagctacctcatcacctgttacccttttgtccaggag
aaccaacccaacagacaacagcaccccatgtatagcggaggaggggacctgcgctggcag
cagcccaaccccagcccaggtggtccgtacctagcttaccccatcctgtcctccccccag
cctccagtctccaacgactacacctactaccagatcatgcctgcaccctgcccccccatg
atgggcttttaccagcccttcccaggaacgtacgccgggcccctgcagcctggcgtggta
aaccctatatcagctgacgtcagcgagagaccggcccctctcggacaggcgtttggacta
gctaatcagagaggtgggaggggcatggtcagacctgccgttctacccaagtctatgttc
tatcagcagcagcaggtggggttgtgtcagtccctgagggccagaaggccccccatgagg
actgtagctgtccagaaggaggtgtgttcctcggggccagatggacggaccaagacagtc
ctactggtggacgctgcccaacagactgacttcccaggggacaatgcgtgtggtcgtggt
gcgtcggaacgggagcgggccagccccctgctgtggaagaaccttccccggagaaggcgg
gcctcgcaccctgcggagagctccagcgaggcggacatcgacagcgacagcggatactgc
agccccaaacacaaccagcaggccccgggggttacgcaacacaatgcccacgctgctata
gctcctacgggagtggatgcaggtgtaatgacagcagtaagctgggtgaacgtagcgtct
caggcctctcagaggccgtggtcagacaacaggaccaccccgttccaacggacagggaag
acccctgatcagaggaactactcgcagcaggacttccatacagggtactcaggggggcgt
gtctgttctaaccccacccccgcagacagtaacggtggtctgcagcagagacggctccag
cccggactgggccctgggacggtgcttgctcctgagccactctactttgaggatgaggat
gagtttccagagctggtctcaggaggggcacagaggaacatcaaaccagaccctaaccct
tcccagaaccaacaccagaccaaactaaccaagaacctgctggagaaccttccagagaac
tctcccatcaacatcgtccagacccccatccccatcaccacctccgtccccaagagggcc
aagagtcagaggaagaaggccctggccgctgccctggctacagcgcaggagtactctgag
atcagcatggagcagaggaaactacaggaggcactgaccaaagcagcagggaagaagagt
aagactccagtccagttggacctgggagacatgctggctgctctggagaaacagcagcag
gccatgaaggctagacaaataaccaatactaaaccactgtccttcacaggtacacactgc
acacatacaccccacacacacacaccacaccacactccagtccagttggacctgggagac
atgctggctgctctggagaaacagcagcaggccatgaaggctagacaaataaccaatact
aaaccactgtccttcacaggtacacactgcacacatacaccccacacacacacaccacac
cacactccagtccagttggacctgggagacatgctggctgctctggagaaacagcagcag
gccatgaaggctagacaaataaccaatactaaaccactgtccttcacagtgggtacagca
gccccgttccatggttcagggccaggtgccgggtcgggagcagggtcaggtatagtatca
atgttgaaggcccagcaggcccactctgcccccctcaacatgctggactccagcgctcca
cgcctaaagcgagggaaggagagagagatccctaaagtcaaacgacccaccgccctgaag
aagatcattctgaaggagcgtgagggaaagagggggaaggggggtgtggatcagattgct
gccagccaggaagaacagggagaagaggagctacacttcactgacgacctcacacgggaa
cctgcctctcaggaggagaacggtctgagcgtgcccagtgatgacgcgtccctgtccccg
gccagtcagaactctccgtacagcatcacgcctgtttcccaaggttcccctggctcctct
ggcatcggcagccccatggcctctaacgccattaccaagatacacagccgccgcttcaga
gagtactgtaaccaggtgttgaataaggagatagatgagagtgtgacaatgctgctgcag
gaactggtccggttccaggagagggtttatcagaaggaccccagcaaagccaagaccaaa
cgcagactggtcatgggccttagagaggtcaccaaacacatgaagctccacaagatcaag
tgtgtcctcatctcacccaactgtgagaagatccaggccaaagggggtctagatgaggct
ctgtacaacgtcatagccatggccagagaacaggagatcccgtttgtgtttgctctgggt
aggaaggctctgggacgctgtgtcaacaaactggtgcctgtcagtgtggtgggcgtcttc
aacttctctggagcagagggtctgtttaaccggttagtgtctctgacggaggatgctcgt
aagtcctacaaggacatggtgtcagcgctggagcaggagcaggctgaggaggcgctgaag
aacgtcaagaaggtcacccaccacatgggccactccagaaacccctccgctgcctccgcc
atctccttctgctccgtcatctctgaacccatctctgaggtcaacgagaaggagtacgag
accaactggaggagtatggtggaatcgtcagatgggctggagcctgtggaggctaaaccc
agccatcctgctgcttcctctgggttgcagagagacaaccagcccccctccaccaccacc
aaccgcagcccttactccactaccctccagctcagagcacccgtccctgctccaggctca
ggcccgggggagagagaagagggtcgggcagacgaccggttggagctggcctcccagcag
agcacggagacaggcagtttggatgggagctgtagggacctcctcaactcctccatcacc
tccaccacctccaccctggtccccggtatgctggaggaggcagaggaagaggaggaggag
gaggaagagtacacaccagagcccatctctgtggaggtgcctgcagtcatcagccgcatt
gagtcctgggtgtctaagacgctggagaaccttcagctggggaagagccaggacagcaca
gaggaagaggaggaggaggaggaggaggaggagggagtgcagagtgaggaggaagaggag
ttggattctgctgatgtcacagagactgggctggagaagatggaggccaataatatcact
ggctga
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