Oncorhynchus mykiss (rainbow trout): 110506150
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Entry
110506150 CDS
T07259
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110506150
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
Tudor_5
BRCT
DUF4537
RTT107_BRCT_5
SH3_Hsr9
Tudor_2
Motif
Other DBs
NCBI-GeneID:
110506150
NCBI-ProteinID:
XP_036837016
LinkDB
All DBs
Position
6:81815343..81860498
Genome browser
AA seq
1892 aa
AA seq
DB search
MDPSGSDLDSSLPHAENPCLIVEDSQPDSAALEDDPDSSYRALLARRLSSLQPATSHSPV
LELMSSPAGNRYSETDSQSERVQNNNHNGPVNQEESQVLEVCSNTRRCSTEDMATESGAD
STTHCAQPEGGVSKLDFLELSESQGPGEVVGNSQEEEGPTAAQTDSQRHNQPGEQKNTTR
GLTSGSQDRKSKRSEVSSSSSSEPLGRAGRELSVQALLHSQGLQASEDQDPKGEDSELLS
SQEDLFDTDKTGTGVDSTMSEAENQGVPTLTPAHTLRLLHLSGQGTLVQESLSQNSEFVA
PTQENLSQTPFIVPNSPTGQENELGADESMDTSMPPEDQSDGKEEEPMDPAPKSHPSAST
PVSQNSPGFVLERTLSLPTQPELSHDVFVPTQSQEAGSSSIAPQETHSRKVTSSSQPTAL
DSSSPKMAAAPAQSKAPTTTDREHSVIDSFQLELSLNTQSCSLAQQASMQAGGKDVEEDS
QATQIEGLDGRLRIDTSDSVISRNSQKRESNGVPSDPKTPAILPKVPQVPDLLKTSGEST
RREECSTSQKSDTHKQTTLNVRNVNIGDDGINVTKTDSSQKQDAKASSPSPSSQQKLETI
DLFTPSSCVQETPSSSNSAACSLASLSQSQSQSVFPQRSHVGSVKALSPSPGVCVDSRRD
GGGRRDIGEAGGGGSPTSSQKNRDPSKSIQSLSQEHGGTATNSPKEKNKADEEGMEEGGE
KQHDSTLGPEGSGLYLSLSQSQVLSPEPMEEEEEEKIGKFPVSHSSSEGGVGEEESCSSI
IVLEESERSSQLLEKEVKSPSNMGTSQPVASRRGSVSSNGTGSQLKDTQLVPIGLTQADK
EGSREAEGLRDKSLSDSSGEIPFHFTLPKEGELIGPPVSATPPLISQLKQTPRHSTPIDM
TSFSEKSAAVGDVSTETAMATSEITAGESGEDTADGADGKLSLRMKLVTPVEEGSSEHFS
LQKPPQSDEEGSVSKVTTVVKAVTSVPVPSPLPSPSVFSRVREAHRQVMEDQTEAHPSDP
GTPVRGELFSSPSQQKSSQRPSIPSLSLECISLPNSQSEPLSSPRQEVKHTLPLGLREKE
PPAEPSTPGRPAVKTPQKGTAAGDREPCGPPEPSTPTRAAAIRQRAVSQQTSFDNTIAPS
SPSKLCQRVAFQQTSFEAAGPRSPAASGEPETPPSRAAAGPAHRRHVRTIQEVRTTVTRI
ITDVYYEDGREVDCKVTEESEEPVVDSRVLESDISPCRTGSSMTSGDLGDVSSLSSKASS
LQHSSGGTSIVTGPAQRGPEFVMPPSRGAKSVSPRRGSGPQQRGHRGQTAGSEFMSERVQ
GLHGSRAFTPLTPRGRARRGRPPSRSPLSRGAGVPRTNARGQPLSSSEDEPYTRLCPTPH
IPDSPAVPSHSSTSLLTTISQDESSPAGSSFVGLRVVAKWSSNGYFYSGRITKDLGEGRY
RLLFDDSYECEVTGKDILLCDPIPLDTEVTALLEDEYFSTGRVKDYKKEGEDLFYSVEKQ
GQTTAVEREGQTTAVEREGQTTATTAVERQWYSRSSVILTMEQGNRLREQYGLGPYEPST
PLAKASDISLDNLVEGKRRRRGITGGASPLTPGPSGKRKLISSEDRDRTPAKRGRRGGAR
AGQRVGVCNTSGSGTDLPWDHSDLAETHGPLPQSASLFVGFVFMLTASSESDRQTNQPIS
DGEEEYVQTAPYHKRYTETQLEAGAGFILNDFNEEQCKAAYQSLLITDQHSRTRKYLLCV
ASGVPCVSHIWVRDCCKEGKLLNYRNYLLPAGVGPDERIVEWHPRCSPFKALRVLLVFEE
PAELWSELLMMSGASSVRQHQAEKDSSDIPVGKFDVVVTDHTCPPLVLKSVTSQEVPMVS
PEWLIHSLICGERLGYHSNPQYRHDYTSPPSS
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atggatcctagcggaagtgacctggattcgagtctgccccatgcagagaacccttgcctg
atcgtggaggactcccagcccgacagtgcggcactggaggacgacccggacagtagctac
cgcgccttgctcgcccgccgcttgtccagcctgcagcctgccacctcccacagccctgta
ctggagctgatgtcctctccggcaggaaaccgatactccgagacagacagccaatcagag
agggtccagaacaacaatcacaacgggccagtcaaccaggaggaaagtcaagtcctagaa
gtttgctccaatacaaggaggtgttctacagaagacatggccacggagtctggggcggac
tccactacacactgcgcccagcctgaagggggagtgtccaagttagattttctggagctt
tctgagagccagggtccgggtgaagtggtggggaacagtcaggaggaggagggccctact
gctgcccagacagacagccagagacacaaccagccaggtgaacagaagaacacaaccagg
ggcttgacttcaggcagtcaggacagaaaatccaagaggtcggaggtgagctctagcagc
tcgtcggagcccctgggtcgtgccggccgggaactgagtgtccaggctttgctccactcc
cagggcctgcaggcctccgaggaccaggatcccaaaggggaagactctgagctgctgtcc
tctcaggaggacctcttcgacactgacaagacaggcacaggggtggacagcacaatgtca
gaggcagagaaccaaggtgtgcccaccctgacccctgcccacaccctgcgtctgctgcac
ctctctgggcagggcaccctggtgcaggagagcctctcccaaaactctgagtttgtagca
cccacccaggaaaacttgagccaaacacctttcatcgtccccaattcaccgacaggacaa
gaaaatgaactgggtgccgacgaatcaatggacacgtctatgcctccggaggaccaatcg
gatggtaaggaggaggagccaatggacccagctcctaagtcacacccctcggcatccacc
ccagtatcccagaactccccaggttttgtgttggagaggaccctctctctgcctacccag
cctgagttatctcatgatgtatttgtcccaacccagagccaagaggctggaagcagtagc
atagctccacaagagacgcacagcaggaaagtgacatcatcatcccaacccacagccctg
gattcaagctcacccaagatggccgctgcacccgcccagtccaaagcacccacaacaact
gaccgagaacactctgtgattgattctttccaactagagctgtctctgaatactcagagc
tgtagtctggcccagcaggcttccatgcaggctggggggaaggatgtcgaggaggacagt
caggctacacagatagaaggtctggacggacgcctacggatagacaccagtgactctgtg
atttcacgtaacagccagaagagggaaagtaacggggtcccctccgacccaaaaacacct
gctattttgcctaaagttcctcaggtgcctgacttactgaagactagcggggaaagtacc
aggagagaggaatgtagcacatcacagaagtctgacacgcacaaacagacaaccttgaat
gtacgcaacgtgaatataggcgacgatggtatcaatgtgaccaaaacagatagttctcag
aagcaggatgccaaggcctcttccccctctccttcctcccaacagaagcttgaaaccata
gacttattcacccctagcagctgtgtgcaggagacgccttcttcctcgaatagcgctgcc
tgtagtttagcctccctgtctcagtctcaatcccagtctgttttcccacagaggtctcac
gtgggatcagtgaaggctctctctccgagtccaggtgtttgtgtagactccagaagagat
ggaggaggaaggagagacataggagaagcaggaggagggggaagcccgacgagctcacag
aaaaaccgggacccgtctaaatccatacagtctttatcgcaggagcatggaggcactgct
accaacagcccaaaggagaaaaacaaagcagatgaagaagggatggaggaggggggagag
aagcagcacgacagcacgttggggcccgagggctcaggcctctatctgtctctctctcag
agccaggtgctttctccagagcccatggaggaagaagaggaggaaaaaatagggaagttc
cctgtctcgcactccagtagcgagggaggagtaggagaggaggagagctgcagcagcatc
attgtgctggaggagagtgagaggagctcccagctactggagaaggaagtgaagtcgccg
tctaacatgggcacgtctcagccagtggcaagccggcgggggtcagtgtcgtccaatggc
acagggtcacagctgaaggacacccagctggtaccaatcggactcacccaggctgataag
gaagggtctagggaagcagaggggctccgagacaagagcctcagtgacagctctggagag
attccattccacttcactctccccaaagaaggcgagctgattggccctcctgtgagtgcc
actccccctctgatcagccagttgaagcagacaccaagacacagcactccgattgacatg
acttccttctctgagaagtccgcggcggtgggtgatgtttccacggagacggcgatggcg
accagtgaaatcacggcgggggagagtggcgaggacacggccgacggggctgatgggaaa
ctgagtttgcggatgaagctggtgacccctgtggaggagggcagctcagaacacttcagc
ctgcagaagccaccgcaatcagacgaggaaggctctgtctccaaggttaccaccgttgtc
aaggctgtaaccagtgtccctgtccccagccccctgcccagcccctctgtgttcagcagg
gtgagggaggcccacagacaggtgatggaggaccagaccgaggcccatcccagtgaccct
ggaacccctgtcagaggggaactgttcagctcaccctcacagcagaaaagctcccaaaga
ccctccatcccctctctctccctggaatgcatcagcctccccaacagccaatccgagccc
ctctccagcccccgccaggaagtgaagcatacgttgccattggggctcagagagaaagag
cctcctgctgaaccatccaccccaggccgtccagcagtgaaaacaccacaaaaaggcacc
gcagctggggatagagagccgtgtgggcccccggagccatccacccccaccagagccgct
gccatcagacagagggccgtgtcccagcagacaagctttgacaacaccatcgctcccagt
tcacccagtaagctttgtcagagagtggcgtttcagcagaccagttttgaagcggctggc
cccaggtctccagcagccagcggcgagccagagaccccaccctcgagggcagctgctggt
cccgcccatcgcagacacgtgcggaccattcaggaagtgcggacgacggtcacacgcatc
atcacagacgtgtactacgaggacgggagagaggtggactgtaaggtcactgaggagtcg
gaggagccggtggtggacagccgtgtgttggaaagcgacatctctccgtgtcgcaccggc
agctccatgacctccggtgacctgggtgatgtcagctctctgtcctccaaagcttccagc
ctgcagcacagctccgggggcaccagcatagtcacgggtcctgcccagaggggccccgag
tttgtcatgccacccagccgaggggccaagtctgtcagccccaggagggggagtgggcca
cagcagaggggccacaggggtcaaacggcagggtcagagttcatgagcgagagagttcaa
ggactccatgggtcacgggcattcaccccattgacgccccgcggaagagccaggaggggc
agacctccgtcccgctcacccctgtccaggggtgccggcgtccctcgtaccaatgcccgc
ggccaaccactgtcctcctccgaggatgagccctacacccgtctgtgtcccaccccgcac
atcccagacagcccagcggtccccagccactcctccacgtctctcctcactaccatttcc
caagatgaaagcagcccagctgggagcagcttcgtggggcttcgcgtggtggccaagtgg
tccagcaacggctacttctactcaggccgcatcaccaaggacctgggcgaggggcgttac
cggctgctcttcgatgacagctatgagtgcgaggtcacgggcaaggacatcctgctgtgc
gaccccatccccctggacactgaggtcacggcactgctggaggacgagtacttcagcaca
ggtcgagtgaaggactacaagaaggagggcgaggacttgttctacagtgtggagaagcag
ggccagactacagctgtagagagggagggccagactacagctgtagagagggagggccag
actacagccactacagctgtagagaggcagtggtacagccgcagttctgtcatcctgacc
atggagcaaggcaacaggctgagagaacagtacggcctgggaccctacgagccctccaca
ccccttgccaaggcctctgatatcagcctggataacctggtggaggggaagaggagacgc
agggggatcacagggggggccagccccctcacccctggcccctctgggaagaggaagctg
atcagctctgaggacagggacaggaccccggctaagcgaggccgcagagggggagccaga
gccggtcagcgggttggtgtgtgtaacacctcaggcagtggcaccgacctgccctgggac
catagtgacctggcggagactcacggcccgctgccccagagtgcatctctcttcgtgggc
tttgtcttcatgctgaccgcatcatcagagagcgaccgccagaccaaccagccaatcagt
gatggcgaggaggagtatgtgcagacggccccctatcacaaacgctacactgagacacag
ctggaggccggagcaggcttcatcctcaacgacttcaacgaggaacagtgcaaggcggcc
tatcagagcctgctgatcaccgaccagcatagccgaaccaggaagtacctgctgtgtgtg
gccagtggtgtgccgtgtgtgtctcacatctgggtgagggactgttgcaaggagggcaag
ctgctcaactacaggaactacctgctgcccgccggagtgggccctgacgagcgcatagtg
gaatggcatccgcgctgcagcccgtttaaggccctgcgggtcctgttggtatttgaggag
ccggcggagctgtggtctgagctgctgatgatgagtggagcttcctctgtgagacagcat
caagcagaaaaggacagctctgacattcctgtgggcaagtttgatgtggtggtcacagac
cacacctgtccgccattggttctgaagagtgtgacatcacaggaagtacccatggtgtcg
cccgagtggctaatccacagtctgatctgtggggagcgcctgggataccatagcaacccc
caatatcgtcatgactacacatccccaccctcatcctaa
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