Oncorhynchus mykiss (rainbow trout): 110506194
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Entry
110506194 CDS
T07259
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110506194 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110506194 (cstf3)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110506194 (cstf3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_19
TPR_6
TPR_16
Motif
Other DBs
NCBI-GeneID:
110506194
NCBI-ProteinID:
XP_036837193
Ensembl:
ENSOMYG00000034267
UniProt:
A0A8C7T5T3
LinkDB
All DBs
Position
6:85578112..85596032
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AA seq
716 aa
AA seq
DB search
MSTEATADQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAVQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAAQY
LDQSSKLLAEKGDMNNSKVFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRLKHEKVH
SIYNRLLAIEDIDPTLVYIQYMKFGRRAEGIKSGRIIFKKAREDMRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEK
SGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAALLQTETVVTPSAPTQKDEADRKPEYPKPDTSQMIPYQPRHLAPP
GLHPVPGGVFPVPPAAVILMKLLPPPTCFVGPFVQVDELMESFRRCTLPETVDAAVELIT
GRQPDTGGEGNGSMENHAMTKSLKRPNADSDEEEDKGAVAPPVHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggaagcaaccgccgaccaggcagctgagtatatcccggagaaggttaagaaa
gcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgattcga
gaagcacagaaccaaccaatagacaaagcaaggaagacgtatgaacgacttgtggcccag
ttcccaagctcgggcagattctggaaactattcattgaagcggagatcaaggcaaaaaac
tatgacaaggtagaaaagttgtttcagagatgtctgatgaaagtgctgcacatcgacctg
tggaaatgctacctctcctacgtccgagagacgaaaggaaagctacccagctacaaagag
aagatggcgcaggcgtatgactttgcgctggataaaatcggcatggagatcatgtcctac
cagatatgggtggactacatcaacttcctcaaaggagttgaggcggttggttcgtacgct
gaaaaccagcgaatcacggcggtgcgcagggtctaccagaggggctgtgtgaaccccatg
atcaacatcgagcagctctggagagactacagcaagtatgaggagggcatcaacgtacat
ctggccaagaagatgattgaggaccgcagcagagactacatgaacgctaggagagtggcc
aaggaatatgagactgtgatgaagggtctggataggaacgccccctcggtgcccccacag
aactccccccaggaggcggtgcaggtggagatgtggaagaagtacatccaatgggagaag
agcaacccgctccgcacagaggaccagacactcatcactaagagagtgatgtttgcctat
gagcagtgtctgttggtgctgggccatcaccctgatgtgtggtatgaggctgcccagtat
ctggaccagtccagtaaactactggcagagaagggggacatgaacaactctaaggtgttc
agtgacgaagcagctaacatctacgagcgcgccatcggtactctactgaagaagaacatg
ctgctgtacttttcattcgctgactacgaggagagtcgattgaagcatgaaaaggtccac
agcatctacaaccgtctgctggccatcgaggacatcgaccccacgctggtctacatccag
tacatgaagtttggcaggcgggccgagggcatcaagtcaggccgcatcatctttaagaag
gcccgggaggacatgcgcacgcgtcaccacgtctacgtgactgcagcactgatggagtac
tactgcagtaaggacaaatcagtggcctttaagatatttgagctgggcttgaagaaatat
ggagacattccagagtatatacttgcatacatcgattacctctcacaccttaatgaggac
aacaacaccagagttctgtttgagcgtgttctcacctcgggaagcctgtcgccagagaag
tctggtgagatctgggcacgtttcttggcctttgagagtaacatcggggacctggccagt
atcctgaaggtggagcgcaggcgtttcacggccttcaaggatgagtacgaaggcaaggag
acagccctgctggtggacagatacaagttcatggacctgtacccctgttctgccagcgag
ctcaaagccctcggatacaaggacgtgtcccgtgccaaactggcagcgttgctccagaca
gagacggtggtgactccatcggctcccacgcaaaaggacgaggccgaccgcaaaccagag
taccccaaacctgacaccagccagatgatcccctaccaaccacgacacttggcccctcca
ggactgcaccctgttccagggggggtgttcccggtccccccggccgcagtcatcctgatg
aagctactgcctccaccaacctgcttcgtggggccctttgtgcaggtggatgaactgatg
gagagcttcaggagatgtacactaccagagactgtagatgcagcagtagagttgataacg
ggcaggcagcctgataccggaggagaagggaacggttccatggagaaccacgccatgacc
aagtcactgaagagacccaatgcagactctgatgaagaggaggacaagggcgctgtggcc
ccacccgttcacgacatctaccgcgctcgccagcagaagaggatccggtga
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integrated database retrieval system
