Oncorhynchus mykiss (rainbow trout): 110506217
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Entry
110506217 CDS
T07259
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110506217
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110506217
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
SesA
DUF4508
Motif
Other DBs
NCBI-GeneID:
110506217
NCBI-ProteinID:
XP_036819530
Ensembl:
ENSOMYG00000040584
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All DBs
Position
26:complement(50374843..50422761)
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AA seq
1267 aa
AA seq
DB search
MPERQDTPLGALPLQRRCPRCGDVLEWSREQSALLACRCYSQLDEAVESVAEGRGRGASR
GDKERGHWAAGRVGDIDFTGTSRTRGKVTLLQPQGNTVTTTRQHCYNHKFVRVHSSTDPV
LIYQMLTEQWGLAPPHLVVALVGGDELAQMKPWLRDTVRKGLVKAAQSTGAWILTNGLRF
GITKHLGQAVRDHSLASTSSKVKVVAIGIAPWNMIHNRDALLAAKPDQPAVVEPQDLSHG
AVYSLDCNHSHFVLVEEDPQRPGATSEMRVKLLKHISLQRTGYGGAGSFEIPVLCLLVHG
EPRILQRMYKGIGNAMPWLILAGSGGVAHILVTLMNRGCWDMDSVQELLLDTFPSVHHST
DITNWTKLIQKILDNGHLLTVHDPEQESSELDTVILKALVKACKSQSQEAQDFLDELKLA
VAWNRVDIAKSHIFNGDVEWTAGDLEEVMMDALVNDKPDFVRLFVDNGVCLGEFLTYGRL
QELYCSVSEKSLLHLLLLKKHQEKQLLLKATRTPGPPHDHHKAESGDRKARFTLHEVSKV
LKDFLHDSCKGFYQKLPTEKTGKKAGRLITNQKSLAELEERCEHPWRDLFLWAVLQNRQQ
MANYFWAMGPEAVAAALAGCKILKEMSGLESEAESARSMKEAKYEQFALDLFGECYSNSE
DRAYALLVRRTRCWNQSTVLNLATEADAKCFFAHNGVQGFLTKIWWGAMTTDTAISKLVL
SFFCPPLIWTNLIKFSDEELDSRGGGEEQYVELDSLDTEKALLLTDNDPLDSGGPPGGVE
GQSSAAVWWRFLLRRWRRFWSAPVTVFLGNVIMYFAFLILFTYVLLLDFRPPPPAGPGAP
EIMLYFWVFTLVLEELRQSFFTDEDMSILKKFKLYVEDNWNKCDMVAISLFVIGVSCRMM
KDTYEAGRTVLALDFMVFTLRLIHIFAIHKQLGPKIIIVERMMKDVFFFLFFLSVWLIAY
GVATQALLHPNDPRLDWVFRRVLYRPYLHIFGQIPLEEIDVARMPETNCTTVIEEIIMGT
LPPCPNIYANWLVILLLVIFLLVTNVLLLNLLIAMFSYTFQVVQGNTDIFWKFQRYNLIV
EYHSRPALAPPFIIISHCSQLLLSLVKSPEPKLEQLERELPAGLDQRLMTWETVQKENYL
AKLERQHLESSEERLKSTSSKVQSLLKIVGGFKEQEKRMSSMEAQVKYCGEVLSWIAECF
SQSTLKCEREAPRVPSVKATGVTAVKAGASRDPSQNVSDKEVEPERREAKLGPSGYGANK
RFPYIDQ
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgccagagagacaagacacacctctgggggcgctaccgctgcagagacgatgcccacga
tgcggggatgtactggagtggtcacgggagcaaagtgctctgttggcctgccgttgctac
tctcagctggacgaggccgtggagagtgtggctgaaggccgaggccggggtgctagcaga
ggagacaaggagaggggtcactgggctgcaggacgagtgggggacattgacttcactggc
accagtaggacaaggggaaaggtaacactgttacaaccacaaggtaacactgttacaacc
acaaggcaacactgttacaaccacaagtttgtgagggttcacagctccacggatccagtg
ttaatctaccagatgctgacagagcagtggggactagcccctccacacctggtggtggct
ctggtggggggagacgagctggctcagatgaaaccctggctcagggacaccgtgaggaaa
ggactggtcaaggctgctcagagcacaggtgcctggatcctgaccaacgggcttcgcttc
ggcatcaccaagcacctgggccaggctgtccgtgaccactctctggccagcacctcctct
aaggtcaaggtggtggccatcggcatcgctccctggaacatgatccacaacagagacgct
ctgcttgctgctaagccagaccagcctgccgtggtggagccccaggacctgtcccatggg
gcggtgtactccctggactgcaaccactcccactttgtcctggttgaggaggaccctcag
cgccccggggccaccagcgaaatgagggtcaagctgctcaagcatatctccctgcagcgc
accggttatggaggtgcaggcagctttgagatcccagtgctgtgtctcctggtgcacgga
gaacctcggatcctacagaggatgtataagggcatagggaacgccatgccctggctgata
ctggcagggtcggggggcgtggcccacatcctggtcacgctgatgaaccggggctgctgg
gacatggacagcgtgcaggagctcctgctagacacctttcccagcgtgcaccacagcact
gacatcactaactggaccaagctgatccagaagatactggacaacggccacctcctgaca
gttcatgaccccgagcaggagagctctgagctggacacagtcatcctcaaagctttggtc
aaagcctgtaagagccagagtcaggaagctcaggacttcctggatgagctgaagttggcg
gtggcctggaaccgggtggacatcgctaagagccacatcttcaatggggacgtggagtgg
acggcaggtgacctggaggaggtgatgatggacgcgctggtcaatgacaagcccgacttt
gtgcgtctatttgtggacaacggcgtgtgtctgggcgagttcctgacctacggccgcctg
caggagctctactgctctgtgtcagagaagagcctccttcatctcctcctcctgaagaag
caccaggagaaacagctcctactgaaggctacacggacccctggaccccctcacgaccac
cacaaggccgagtccggggaccggaaggcccgcttcaccctgcatgaggtgtccaaagtg
ctgaaagacttcctgcacgactcgtgtaaaggcttctatcagaagctgcccacggagaag
acaggcaagaaggcaggccgtctcattaccaaccagaagagccttgctgagttggaggag
cgctgtgagcacccctggagggacctgttcctctgggctgttctccagaaccggcagcag
atggctaactacttctgggccatgggtcctgaggctgtagcagcagctctagctggttgt
aagatcctgaaagagatgtctggcctggagtcagaggcagagtcagcacgcagcatgaag
gaggccaagtatgagcagtttgccctagatctgtttggggaatgctactctaacagtgaa
gacagggcctatgctcttctggtgagaaggacccgctgctggaatcaatccaccgtcctc
aacctggcaaccgaggctgacgccaagtgcttcttcgcccacaatggagttcaggggttc
ctcactaagatctggtggggggcgatgactacagacacagccatctccaaactggtgctg
tctttcttctgtccccctctcatctggaccaacctcatcaagttcagtgatgaggaacta
gacagtcgtggtggaggagaggagcagtatgtggaactagacagtctggacacagaaaag
gccctgctactaacagacaatgaccctttagactcggggggtcctcctggtggcgtggag
ggccagagcagcgccgccgtgtggtggcgtttcctgctgcgtcgctggcgtcgcttctgg
agtgccccggtcactgtgttcctaggcaacgtcatcatgtactttgccttcctcatcctg
ttcacctacgtgcttctgctggactttcgtccgccgccccccgcgggccctggggcccct
gagatcatgctctacttctgggtcttcaccctggtgctggaggagctgagacagagtttc
ttcacagacgaagacatgagcatcctgaagaaattcaagctgtacgtggaggacaactgg
aacaagtgtgacatggtggccatctcactcttcgttatcggtgtgtcctgcaggatgatg
aaagacacgtatgaggcggggcgaacagttctggcgctggacttcatggtgttcacactg
cgtctcatccacatcttcgccatccacaagcagctggggcccaagatcatcattgtggag
aggatgatgaaggatgtgttcttcttcctgttcttcctgagtgtgtggctcatagcgtac
ggcgtggctactcaggcccttctccaccccaacgacccgcgcctagactgggtgtttcgc
agggtcctgtatcgaccctacctgcacatctttggccagatcccattggaggagattgac
gtggcacggatgcccgagaccaactgtaccacggtgatagaggagatcatcatgggaact
ctgcccccttgtcccaacatctacgccaactggctggtcatcctactgctggtcatcttc
ttactggttaccaacgttctgctgctcaacctcctcatcgccatgttcagctacacattc
caggtggtgcagggcaacacagacatcttctggaagttccagaggtacaacctgatcgtg
gagtaccacagccggccagccttggccccgcccttcatcatcatcagccactgttcccag
ctcctcctcagcctggtcaagagtcctgagcccaaactggagcaactagagagggagctg
cctgcaggtctggaccagaggttgatgacctgggagacagtacagaaggagaactatctg
gccaaactggaacggcagcatctggagagcagtgaggagagactgaagagcacctcttcc
aaggttcagagcttattgaagattgttggaggattcaaggagcaagagaagcgaatgtca
tccatggaagctcaggtgaagtactgtggggaggtgctgtcctggatcgctgagtgcttt
tcccagagtacactcaagtgtgagagagaggcccccagagttccatctgtcaaggctact
ggtgtcacggctgtgaaggccggcgcttccagagatccctctcagaatgtgtcagacaag
gaggtcgagccagagaggagagaggctaaactaggcccctcaggatacggagccaacaag
aggtttccttacatcgaccaataa
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