Oncorhynchus mykiss (rainbow trout): 110506262
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Entry
110506262 CDS
T07259
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110506262
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110506262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-GeneID:
110506262
NCBI-ProteinID:
XP_036822772
UniProt:
A0A8C7QQF2
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All DBs
Position
1:complement(20367990..20481812)
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AA seq
1642 aa
AA seq
DB search
MPSLPSPSPAMDGENYLHPEGPQLDSSIFEVASSNMESYLYPSGSWASFSQQSGGYNAHC
PMQSGNQQYHLNAPMPDLDMFSHSGFHDDFLNLPRNGDFPQNLSCIDDLSNSLFSSPADS
LSDYTDAQAFIPTDNLAHVPTIWDINTPAQSQLELNANRFQDLNSLEDIAAIISTPPLGG
YQQTQRNQTPAEEEAEEEEEETEELGHVDTYADYKPSKSTIGISHPDIVVETNTLSSVPP
PDITYTLSIPNSTINCGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKGRTV
AGIILENYLKGRKKALWFSVSNDLKYDAERDLKDIDAPTIPVHALNKIKYGDTATSEGVL
FATYSALIGESQAGGQHRTRLKQILDWCKPGFDGVIVFDECHKAKNATSTKMGKAVLDLQ
HNLPLARVVYASATGASEPKNMIYMSRLGIWGEGTPFKTFDDFLHAIEKRGVGAMEIVAM
DMKVSGMYIARQLSFSGVSFRIEEIGLDDDFKLVYNKAAKLWAEALAVFMRAADALCLVS
RKSLWGQFWSSHQRFFKYLCIAAKVRCLVELAKKELKAGKCIVIGLQSTGEARTREVLDE
NDGHLDRFVSAAEGVFKALVQKHFPSEKQRREKARGNKRKRKPRGRQPKFPKHTMVHLGG
VINISDDSSTDTDGMDTDSNSSPDSLMDNNDDVIFVQHTSCHTASIEKMKQSLLNKIADL
GKELPLNTLDELIDQFGGPEMVSEMTGRKGRVVRRPDGSVRYESRAEQSHTIDHINLKEK
DRFMCGEKMVAIISEAASSGISLQADKRVKNQRRRVHITLELPWSADRAIQQFGRTHRSN
QVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTKA
LDKITKAILGHIESKVSPPKGYPGGDALFFRDMKHGMMDVGIFCKEPRFGLSTEKDCSIT
KFLNRILGLEVHKQNSLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDEIYEEKQETF
MTVGNPQDGQVVLYKISVDRGMPWEEAYEKVQNLNSPDEGFYLSHKLRGNHPCVLLAEQG
RGRNFIVYKPNIGKQAHPESLDNLQLRYRKVTPDQAKDSWESQFNFSFGKCSHANWNGKC
KKIEEGQECLQGMRLRQYHMLCGALLRVWKYVADVVSDITCSSILQIVRLKTKNSNKQVG
IKIPENCVARVRQELLKMDEEVKRRRKEKEQQRAQEQQRAQEQRLAEERQLQNQHLLAKL
YSQRQTLNHSFNNQNLSQGLKTQRLSLAQANPLQVKPSQLKPQLGPVNQLPSMASPTSHF
SNFPHHFPSLRLLQPDPSSSSMPPRTGEEVLDLTVSPSPSPDSKERGLVLDCLNRDGFGL
DSLILLSELAAQNTAHKLQQPLQPLPPLTKPQQLLSPQQIQLQSPQQIQPQLQSPQQMHP
QLQSPQQIQTQLQSPQQIQLQSPQQIQPQLQSPQQIQPQLQLPQQIQPQLQSPQQIQPQL
QSPQQIQPQLQSPQQIQPQQRLDSPTLINSDHQDYYDILKLLEDPDHLPYSLSSQTTTNP
STSSNTVAQVSSGLLSSPSTPSSSLFSPSALAPSEQQPLPLANGHCSTDALINVREVLDN
MLRTSADRQTVIHYRLPEWDSV
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcctcccatcaccctcaccggccatggacggggagaactacctgcacccagag
gggccacagctggacagcagcattttcgaagttgcctcttccaatatggagagttatctg
tatccctctggttcctgggcatcattttcacagcagtcaggaggctacaacgcacactgc
cctatgcaatctggaaaccagcaataccacttgaatgctcccatgcccgatttggacatg
ttcagccattcagggttccatgacgatttcctcaacctccccaggaacggagacttccct
cagaacctgtcctgcatcgatgacctctccaactctctgttctcctctccggccgactcg
ctgtcagactacaccgatgcccaggccttcatccccacagataacctggcccacgtgccc
acgatatgggacataaacacaccagcacagagccagctggagctgaatgccaacaggttt
caggatttgaacagtttggaggatattgctgccattatcagcaccccacctttgggagga
taccagcagactcagagaaaccagactccggcagaagaggaggcagaggaggaggaggaa
gagacagaggagctgggacatgtagacacctacgctgactacaaaccatccaaatccacc
atagggatctcccacccagacatagtggtggagaccaacacgctgtccagcgtccctcca
cctgacatcacctacactctgtccattcctaactccaccatcaactgtggtctgctctct
gccctgcagctggaggccatcatatacgcatgccagcaacacgaggtaattctgcagaac
aaccagagagcaggcttcctgataggagacggggccggagtagggaaaggccgcacagtg
gccggcatcatcctggagaattacctaaagggaaggaagaaagcgctatggttcagtgta
tccaatgacctgaaatacgacgcggagagagatctgaaagacatagatgctcccaccatt
cctgtgcatgccttaaacaagatcaagtatggagacacagctacctcagaaggagtcctg
tttgcgacatactctgcactgatcggggagagccaagcaggtgggcagcaccgcaccaga
ctcaagcagatcctggactggtgcaagcccggctttgatggagttattgtgtttgacgaa
tgccacaaggccaagaatgctacgtccaccaagatgggcaaggccgtgctggacctgcag
cacaacctgccgctggccagggtggtttacgccagtgccacaggtgcctctgagccaaag
aacatgatctatatgagccgcctggggatctggggcgagggcacgcccttcaagaccttt
gacgacttcctgcacgccatcgagaagaggggtgtaggcgcgatggagattgttgccatg
gacatgaaggtgagtgggatgtacatcgcccggcagctgagcttctcaggggtgtccttc
cgcatcgaggagattggtctggacgacgacttcaaactggtctacaacaaagctgccaaa
ctgtgggcggaggcgctggccgtgttcatgcgtgcagcggacgcgctgtgtctggtcagc
aggaagtccctgtggggtcagttctggtcttcccaccagcgcttcttcaaatacctctgc
atcgccgccaaggttcgctgcctggtggagctggccaagaaagaactgaaagctggcaag
tgcatcgtgattggtctacagtccacaggagaggcccgaaccagagaggtcctggatgag
aacgatgggcacctggacagattcgtatctgcagcagagggtgtgttcaaagctctggta
cagaaacactttccctccgagaagcagaggagagagaaggcacgtggaaacaagagaaaa
cgtaagcccaggggccggcagcccaaattcccaaagcacaccatggttcatctggggggc
gtgatcaacatcagtgacgacagcagcacggacacggacggcatggacaccgactccaac
tcctcgccagactccctgatggacaataacgatgacgtcatcttcgtccagcacaccagc
tgtcacacagccagtatagagaagatgaagcagagcctcctgaacaagatcgctgacctg
ggaaaggaactacctctgaacactctggacgagctcattgaccagtttggaggaccagag
atggtatcggagatgacgggtcgtaagggtcgcgtggtgcggcgtcctgacggaagcgtg
cgctacgagtcgcgtgcagagcagagccataccatagaccacatcaacctcaaggagaag
gaccgcttcatgtgtggagagaagatggtggccatcatctcagaggcagccagctcaggc
atctccttgcaggcagacaagcgggtgaagaaccagcgtcggagggtccacataacccta
gagctgccctggagtgcagacagagccatccagcagtttggtcgtacccatcgctctaac
caggtgacggctccagagtacatcttcctcatctctgagctggccggtgaaagacgcttc
gcctccattgtggccaagagactggagagcctgggtgcattgacccacggtgacaggaga
gccacagagtccagagacctgagcaaatacaactttgaaaacaagtacggtaccaaggct
ctggataagatcaccaaagccatcctgggccacatcgagagcaaggtgtcccctcccaaa
ggttaccccgggggtgatgctctgttcttcagagacatgaagcatggcatgatggacgtg
ggtatcttctgcaaggagccacggtttggtctcagcactgagaaagactgcagcatcacc
aagttcctcaacaggatcctgggcctggaggtccacaagcagaactctctgttccagtac
ttcaccgacaactttgactacctgatcgagaaggacaaaaaggagggcaaatacgacatg
ggaatcctagatctggccccaggtaacgatgaaatctacgaggagaagcaagagaccttc
atgacagttggaaacccccaggacggacaggtcgtgctctacaagatcagcgtggacaga
ggtatgccctgggaggaggcctatgagaaagtccagaacctcaacagtcctgacgagggc
ttctacctctcacacaagttgcgggggaaccacccgtgtgtgctgctggcggagcagggt
cgagggaggaacttcatcgtctacaagcccaacatcgggaagcaggcccacccagagagc
ctggacaacctgcagctacgctaccgcaaggtgactccagaccaagccaaggacagctgg
gagagccagttcaacttctcctttgggaaatgtagccatgctaactggaacgggaagtgt
aagaagatcgaggagggtcaggagtgtctgcagggaatgcgtctgcgccagtaccacatg
ctgtgtggtgcgctactgcgcgtctggaagtatgtggctgacgtggtctctgacatcacc
tgctccagcatccttcagatcgtacgcctcaaaaccaaaaatagtaacaagcaagtcggt
atcaagatcccagagaactgtgtggcccgagtgcggcaggaacttctcaaaatggacgag
gaggtgaagagaaggcgcaaggagaaggagcagcagcgcgcccaggagcagcagcgagcc
caggagcagcggctagccgaggagcggcagcttcagaaccaacacctgctggccaagctt
tacagccagagacagaccctgaaccacagcttcaacaaccagaacttgtcgcagggcctc
aagacccagcgcctgagcctggcccaggccaatcctctacaggtcaagccttcacagctc
aaaccccagctcggtccagtcaaccagctccccagcatggccagccccacctcccacttc
tccaatttcccccaccacttcccctccctgcgcctcctgcagcccgacccctcctcctcc
tctatgccccctcggaccggggaggaggtcttagacctgacggtgagcccctctccctcc
ccagacagcaaagagagaggcctggtcctcgactgcctgaacagagacggctttggcctg
gactctctgatattgctgagcgagctcgccgcccagaacactgcacacaaactgcagcaa
cctctacagccactgccaccactgacaaagccacagcagctactgtcgccacagcagata
cagctacagtcgccacagcagatacaaccacagctacagtcgccacagcagatgcatcca
cagctacagtcgccacagcagatacaaacacagctacagtcgccacagcagatacagcta
cagtcgccacagcagatacaaccacagctacagtcgccacagcagatacagccacagcta
cagttgccacagcagatacaaccacagctacagtcaccacagcagatacaaccacagcta
cagtcgccacagcagatacaaccacagctgcagtcaccacagcagatacaaccacagcaa
cggttggacagtccgactctaatcaacagcgaccaccaggactactatgacatcctcaaa
ctgctggaagatccagaccatctgccttactctctgtctagccagacaactactaacccc
tccacttcctccaacacagtggctcaagtctcgtccggcctcctctcttccccctctacc
ccctcctcctctctcttctctccttcggccctggccccctcagaacagcaaccgctccct
ctggccaacggccactgcagcacggacgccctcattaatgtgcgcgaagtgctggacaac
atgctgcggaccagcgcagatcggcagacggttatccattaccggctgcctgaatgggac
tctgtgtaa
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integrated database retrieval system
