Oncorhynchus mykiss (rainbow trout): 110506265
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Entry
110506265 CDS
T07259
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110506265 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110506265 (wdr43)
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110506265 (wdr43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_Prp19
WD40
Beta-prop_THOC3
Utp12
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR3_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_1st
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_WDR41
EIF3I
ASA1
Beta-prop_NOL10_N
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_2
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_ACSF4
Beta-prop_DCAF4
Beta-prop_HPS5
NBCH_WD40
Beta-prop_RSE1_2nd
Tricorn_2nd
Beta-prop_IP5PC_F
Beta-prop_SCAP
MinC_C
SGL
Motif
Other DBs
NCBI-GeneID:
110506265
NCBI-ProteinID:
XP_021441376
Ensembl:
ENSOMYG00000042655
UniProt:
A0A060WQP8
LinkDB
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Position
26:12862989..12899263
Genome browser
AA seq
636 aa
AA seq
DB search
MAADGGSFSLGLPCVFSPKSRQYLALCAQDGRLRIWNTDIKTLNQEYVPSAHLSATCTCI
SWGPCRKAKEGPQRKKRKSEAGQVENQVDLLALGTAAGSVIIYSTVKGALHCTLDASHSG
VVNCVQWHPEDCLLYSGSDDTHIVEWDLQTGKARCKWKADRAPVTSLCVSPDGKLLLSAG
HTIKMWDLETKDVYRKFTGHSTAVTTLRFATTRPPDSNGLYFLSGAAHDRLLSVWQVRED
GKDKNSVVSFNLTDEPHHIDLFTSNSKEEALRLAVVCKDGQLHLFEHFLNGPCKKPLSPL
CTVQMTGVEDSPIPVPLLAAALTTDTHSLLLAYGNHLQPVMERVEVNTAERHVCLTRDVH
TTLSLTMETTVSKVKTPVVNAKSKVVVPGLPGHQAPVKGALGSEKRKSTDAKEMSIEERL
GKIEMSSEKGVKGAPSLQTDNFAVLLVQGLESKDANILNKVFQTRKDMLIKKTVARVPLP
AVLPLVEEITKRMQGHPYTAVLMVRWLKAVLMQHTSYLASLPDLVFQLGVLYHMIESRVK
MFHKLTKLHGKLYLLMTQVVTSGNEVKDVDHTAKLVYEEESSDEDNASGDEGLPDEDSDN
WEEDETMEDKAEEGMRMESKVTADSDIEPGNESEEE
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgatggaggtagtttttctttggggctaccctgtgttttctctccaaagtca
cgtcaataccttgctttatgtgctcaggatggcagacttcgtatttggaacacagatatt
aaaacacttaatcaagaatacgtgccttcagcacacttgagtgccacttgtacctgcata
tcttggggaccatgccgaaaggccaaggagggacctcaacggaagaagaggaaatcagag
gcaggacaggtggaaaatcaggtggacctgttggctctgggcacggctgcgggcagcgtt
atcatctacagcacagtgaaaggagcactgcactgtacactggacgcaagtcacagtggt
gtggtgaactgtgtgcagtggcaccctgaggactgcctgctgtacagtggctcagacgac
acacacatcgtagagtgggacctacagacgggcaaggcgcgctgtaagtggaaggctgat
cgtgccccagtgaccagtctgtgtgtgagtccggatggcaagctgctgctctcagcggga
cataccatcaagatgtgggacctcgagaccaaggacgtgtaccggaagttcacaggtcac
tccacagcggtgacgaccctgcgcttcgccaccacacgccccccggatagtaacggcctc
tacttcctctccggcgcagcccacgacagactcctcagcgtgtggcaagtccgggaggac
ggcaaggacaagaactcagtggtgtccttcaacctgactgacgagcctcaccacatagac
ctcttcacctccaacagcaaggaagaggcgttgaggctagcagtggtgtgtaaagacggc
cagcttcatctctttgagcattttttgaacgggccctgtaagaagcccctgtccccgttg
tgtacagtgcagatgactggggtggaggacagccccattcccgttcccctgttggctgcg
gccctcactacagacacacacagcttgctgctggcctacggcaaccacttgcagcctgtc
atggagagagtggaggtgaacacggcagagagacatgtttgcctgacccgtgatgtccac
accaccctctccctcaccatggaaaccacagtctccaaggtgaaaaccccagtagttaat
gccaagagcaaagttgtcgtccctgggcttcccggtcaccaagcgccggtcaaaggagcc
ctgggatccgagaagagaaagagcacagatgccaaagagatgtctatagaggagcgactg
ggcaagattgagatgtcatctgaaaagggtgtcaagggggccccttctctgcagaccgac
aactttgcggtgctgctggtgcagggcctggagagcaaggacgccaacatcctcaataaa
gtgtttcagacccggaaggacatgttgataaagaaaacagttgcgcgggtacccctccct
gccgtcttgccattggtggaggagatcaccaagagaatgcaagggcatccatacacggca
gtgctgatggtgcgatggctcaaggctgttctcatgcagcacacctcctacttagcctct
ttgccagacctggtgtttcagctgggagtattgtaccacatgattgagagtagagtcaag
atgttccacaagctgaccaagctgcacggcaagctctatctgctcatgacacaggtggtg
acaagcggcaacgaagtcaaagacgtggaccacacggccaagcttgtctatgaagaggag
tcctctgatgaagacaatgcttcaggtgacgaaggtcttccagatgaggattctgataac
tgggaggaggatgagactatggaagacaaggcagaggaaggcatgaggatggaatcaaaa
gtgactgccgattccgacatagaaccggggaacgagagcgaggaggagtga
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