Oncorhynchus mykiss (rainbow trout): 110506405
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Entry
110506405 CDS
T07259
Name
(RefSeq) B-cadherin
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04371
Apelin signaling pathway
omy04514
Cell adhesion molecule (CAM) interaction
omy04517
IgSF CAM signaling
omy04518
Integrin signaling
omy04520
Adherens junction
omy05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
110506405
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110506405
04517 IgSF CAM signaling
110506405
04518 Integrin signaling
110506405
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110506405
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110506405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110506405
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110506405
04090 CD molecules [BR:
omy04090
]
110506405
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
110506405
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Major cadherins
110506405
CD molecules [BR:
omy04090
]
Proteins
110506405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
RibLong
Cadherin_4
Big_13
DUF1366
Motif
Other DBs
NCBI-GeneID:
110506405
NCBI-ProteinID:
XP_021441668
Ensembl:
ENSOMYG00000038855
UniProt:
A0A8C7TU78
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Position
26:22425893..22441484
Genome browser
AA seq
881 aa
AA seq
DB search
MGAFWFVELGVLTLFLQAFNPGSSEESKCLPGFNSEMYIFKVERNHLQSGRRLGKVVFDD
CTSRTSFLFHSEDSRFKVDGDGTLKLKRGLTLHNGHKEFYVSTQSMGKKIKVPVRVLHEA
RHGHHHHHEMTTQPQPGSSLSLPVLNFPKSSGGLKRRKRDWVIPPINFPENGRGPFPEHM
VQIRSNNDKEVKILYSITGPGADQPPVGLFTVDKNSGFLYVTQPLDRERKDKYILLAHAV
AVGAGTAEAPMEIIVKVIDMNDNKPAFTQDPFMGTVPEASKAGDEVMQVTATDADEEGSA
NSDVRYTILSQEPPLPSPNMFVINPVTGMIRVNAPGLDRENILKYTLQIQAADMEGNGLT
SFGKAIITVTDSNDNAPQFVTPSYTVSVPENKVDALVVKMPVTDGDDPHSSAWATTFKIV
DGDPQGLFNVSTGPSKLEGIITTAKPLDFEKNNKYTLLVTVQNEVPFAVPLPTSTATVIV
NVEDVNEAPVFSPVEKMIKKPEDLPIDSDLVLYTATDPDTARNQKVTYKIRNDLAGWLSI
DKDTGMIKVKSPMDRESTFVQDNKYSVVVLGTDNDEIPATGTGTLIIELEDVNDNPPTID
ERMIKVCNKESTPQLLSITDKDGAGFAAPYTVQLQGSSLSNWTARMNDTKTGIILTLKTM
LDSGDYTVVLRVSDIQGLHQESTIQASVCDCKGADVQCTDKAVAGFGLSSILGILGAILL
LLLLSLLLLMFLRKRGGEKKEPLLQEDDVRDNIYYYDEEGGGEDDQDFDLSVLHRGLDNR
PDVFRNDIAPTMARPEYRPRPANPADIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGS
EAGSLSSLNSSSSGDDQDYDLLQQWGPRFKKLSDMYGGGED
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccttttggttcgtggagttgggggtattaacattgtttctccaggcattcaat
ccagggtcgtcggaggagtcaaaatgtctaccgggtttcaattcagaaatgtacattttc
aaagtagaaagaaatcacttacaaagtggccggagactaggaaaagtggtttttgatgac
tgcaccagccgcaccagctttctctttcactccgaggattcacgcttcaaagtagatggc
gacgggacgctgaaactgaagagggggctgactctgcataatggacataaggagttctat
gtctctacccagtccatgggcaagaagatcaaggttccagtcagagtgctgcatgaggcc
agacacggccaccaccatcaccatgagatgaccacccagccccagcccgggtcaagtctg
tctctacctgttctgaacttccccaagtcttcaggaggtctgaaaagaaggaagagggac
tgggtcattcctcccatcaacttcccagagaatggcagaggccccttcccagaacatatg
gtgcagatcaggtccaacaatgataaagaggtgaagatcctgtacagcatcactggtcct
ggggctgaccaacctcctgtgggactcttcactgtggacaaaaactcggggtttctctat
gtgacccagcctttggacagggagagaaaagacaaatacattctcctagcccatgctgtt
gcagtgggtgcaggtacggctgaggcacccatggagatcattgtgaaagtcatcgatatg
aatgacaacaaacctgcatttacccaagatccatttatgggaacagttcctgaagcatca
aaagcaggtgatgaggtcatgcaagtaacggccactgatgctgatgaggagggctctgcc
aattctgatgtcagatacaccattctcagtcaggagcctccactaccaagccctaacatg
tttgtcatcaaccctgtgaccggaatgattcgggttaatgcacctgggttggacagagag
aatattcttaagtatactttgcaaatccaagctgccgatatggagggaaatggccttacc
agctttggcaaagccatcattacagtaacggacagcaatgacaatgcgccacagtttgtg
acgccttcgtacaccgtgtcagtcccagagaataaagtggatgccttggtggtgaaaatg
ccagtgactgatggggatgatcctcactcctctgcctgggccaccaccttcaagatagtt
gacggggaccctcaaggccttttcaatgtgagcacaggccctagcaagctggaaggcatc
atcacgacagcgaagccgcttgactttgagaagaacaacaagtacactctgctggtcact
gtgcagaatgaagtcccatttgccgtccccctgcccacctccactgctactgttatagtg
aatgtggaggatgtgaatgaagctccagtcttcagtccagtggagaagatgatcaaaaaa
cctgaggacctccctattgacagtgacctggttctgtacaccgccacagacccagacact
gcaaggaatcagaaagtcacatacaagatacgcaatgatcttgctggatggctcagtatc
gacaaagacactgggatgatcaaagtcaagagccccatggacagagaatccacttttgtc
caagacaacaaatactctgttgttgttctgggcactgacaacgatgaaatcccagcaact
ggcactggcacccttatcatagagctggaggatgtgaatgacaaccctccaaccatcgac
gagaggatgattaaggtctgcaacaaggagtccaccccacagctgctgtcaatcactgat
aaagacggagcaggcttcgctgctccatacacagtacagcttcaggggtcgtccctttcg
aactggactgccagaatgaatgacacaaaaacgggcattatcctgacactgaagactatg
ttggacagtggagattacacggttgtcctgagagtgtctgacatccagggcctgcaccag
gagagcaccatccaggcctctgtgtgtgactgcaaaggagctgatgtccagtgcaccgat
aaagctgtagcaggcttcggcctctctagcattctgggaattctaggagccattttacta
ctcctattgttgtctcttctgctgctcatgttcctgaggaagagaggtggtgagaagaag
gagcctctgctgcaggaggacgatgtcagggacaacatctactactacgacgaggaggga
ggtggcgaggatgaccaggatttcgacttgagtgttctgcacagaggtctggataaccgt
cctgatgttttccgtaatgacatcgctccaaccatggcccggccagagtatcgcccacga
cccgccaacccagccgacattggcaacttcattgatgataacctgaaggcagctgacaac
gaccccactgctcctccctacgactccctcctggtgtttgactatgaaggaggtggctct
gaggccggctccctcagctccctcaactcctccagctcaggagacgaccaggactacgac
ctccttcaacagtggggcccgcgcttcaaaaagctgtctgacatgtacggaggaggagag
gattga
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