Oncorhynchus mykiss (rainbow trout): 110506405
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Entry
110506405 CDS
T07259
Name
(RefSeq) B-cadherin
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04371
Apelin signaling pathway
omy04514
Cell adhesion molecules
omy04520
Adherens junction
omy05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
110506405
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110506405
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110506405
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110506405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110506405
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110506405
04090 CD molecules [BR:
omy04090
]
110506405
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
110506405
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Major cadherins
110506405
CD molecules [BR:
omy04090
]
Proteins
110506405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
RibLong
Cadherin_4
Big_13
DUF1366
Motif
Other DBs
NCBI-GeneID:
110506405
NCBI-ProteinID:
XP_021441668
Ensembl:
ENSOMYG00000038855
UniProt:
A0A8C7TU78
LinkDB
All DBs
Position
26:22425893..22441484
Genome browser
AA seq
881 aa
AA seq
DB search
MGAFWFVELGVLTLFLQAFNPGSSEESKCLPGFNSEMYIFKVERNHLQSGRRLGKVVFDD
CTSRTSFLFHSEDSRFKVDGDGTLKLKRGLTLHNGHKEFYVSTQSMGKKIKVPVRVLHEA
RHGHHHHHEMTTQPQPGSSLSLPVLNFPKSSGGLKRRKRDWVIPPINFPENGRGPFPEHM
VQIRSNNDKEVKILYSITGPGADQPPVGLFTVDKNSGFLYVTQPLDRERKDKYILLAHAV
AVGAGTAEAPMEIIVKVIDMNDNKPAFTQDPFMGTVPEASKAGDEVMQVTATDADEEGSA
NSDVRYTILSQEPPLPSPNMFVINPVTGMIRVNAPGLDRENILKYTLQIQAADMEGNGLT
SFGKAIITVTDSNDNAPQFVTPSYTVSVPENKVDALVVKMPVTDGDDPHSSAWATTFKIV
DGDPQGLFNVSTGPSKLEGIITTAKPLDFEKNNKYTLLVTVQNEVPFAVPLPTSTATVIV
NVEDVNEAPVFSPVEKMIKKPEDLPIDSDLVLYTATDPDTARNQKVTYKIRNDLAGWLSI
DKDTGMIKVKSPMDRESTFVQDNKYSVVVLGTDNDEIPATGTGTLIIELEDVNDNPPTID
ERMIKVCNKESTPQLLSITDKDGAGFAAPYTVQLQGSSLSNWTARMNDTKTGIILTLKTM
LDSGDYTVVLRVSDIQGLHQESTIQASVCDCKGADVQCTDKAVAGFGLSSILGILGAILL
LLLLSLLLLMFLRKRGGEKKEPLLQEDDVRDNIYYYDEEGGGEDDQDFDLSVLHRGLDNR
PDVFRNDIAPTMARPEYRPRPANPADIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGS
EAGSLSSLNSSSSGDDQDYDLLQQWGPRFKKLSDMYGGGED
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccttttggttcgtggagttgggggtattaacattgtttctccaggcattcaat
ccagggtcgtcggaggagtcaaaatgtctaccgggtttcaattcagaaatgtacattttc
aaagtagaaagaaatcacttacaaagtggccggagactaggaaaagtggtttttgatgac
tgcaccagccgcaccagctttctctttcactccgaggattcacgcttcaaagtagatggc
gacgggacgctgaaactgaagagggggctgactctgcataatggacataaggagttctat
gtctctacccagtccatgggcaagaagatcaaggttccagtcagagtgctgcatgaggcc
agacacggccaccaccatcaccatgagatgaccacccagccccagcccgggtcaagtctg
tctctacctgttctgaacttccccaagtcttcaggaggtctgaaaagaaggaagagggac
tgggtcattcctcccatcaacttcccagagaatggcagaggccccttcccagaacatatg
gtgcagatcaggtccaacaatgataaagaggtgaagatcctgtacagcatcactggtcct
ggggctgaccaacctcctgtgggactcttcactgtggacaaaaactcggggtttctctat
gtgacccagcctttggacagggagagaaaagacaaatacattctcctagcccatgctgtt
gcagtgggtgcaggtacggctgaggcacccatggagatcattgtgaaagtcatcgatatg
aatgacaacaaacctgcatttacccaagatccatttatgggaacagttcctgaagcatca
aaagcaggtgatgaggtcatgcaagtaacggccactgatgctgatgaggagggctctgcc
aattctgatgtcagatacaccattctcagtcaggagcctccactaccaagccctaacatg
tttgtcatcaaccctgtgaccggaatgattcgggttaatgcacctgggttggacagagag
aatattcttaagtatactttgcaaatccaagctgccgatatggagggaaatggccttacc
agctttggcaaagccatcattacagtaacggacagcaatgacaatgcgccacagtttgtg
acgccttcgtacaccgtgtcagtcccagagaataaagtggatgccttggtggtgaaaatg
ccagtgactgatggggatgatcctcactcctctgcctgggccaccaccttcaagatagtt
gacggggaccctcaaggccttttcaatgtgagcacaggccctagcaagctggaaggcatc
atcacgacagcgaagccgcttgactttgagaagaacaacaagtacactctgctggtcact
gtgcagaatgaagtcccatttgccgtccccctgcccacctccactgctactgttatagtg
aatgtggaggatgtgaatgaagctccagtcttcagtccagtggagaagatgatcaaaaaa
cctgaggacctccctattgacagtgacctggttctgtacaccgccacagacccagacact
gcaaggaatcagaaagtcacatacaagatacgcaatgatcttgctggatggctcagtatc
gacaaagacactgggatgatcaaagtcaagagccccatggacagagaatccacttttgtc
caagacaacaaatactctgttgttgttctgggcactgacaacgatgaaatcccagcaact
ggcactggcacccttatcatagagctggaggatgtgaatgacaaccctccaaccatcgac
gagaggatgattaaggtctgcaacaaggagtccaccccacagctgctgtcaatcactgat
aaagacggagcaggcttcgctgctccatacacagtacagcttcaggggtcgtccctttcg
aactggactgccagaatgaatgacacaaaaacgggcattatcctgacactgaagactatg
ttggacagtggagattacacggttgtcctgagagtgtctgacatccagggcctgcaccag
gagagcaccatccaggcctctgtgtgtgactgcaaaggagctgatgtccagtgcaccgat
aaagctgtagcaggcttcggcctctctagcattctgggaattctaggagccattttacta
ctcctattgttgtctcttctgctgctcatgttcctgaggaagagaggtggtgagaagaag
gagcctctgctgcaggaggacgatgtcagggacaacatctactactacgacgaggaggga
ggtggcgaggatgaccaggatttcgacttgagtgttctgcacagaggtctggataaccgt
cctgatgttttccgtaatgacatcgctccaaccatggcccggccagagtatcgcccacga
cccgccaacccagccgacattggcaacttcattgatgataacctgaaggcagctgacaac
gaccccactgctcctccctacgactccctcctggtgtttgactatgaaggaggtggctct
gaggccggctccctcagctccctcaactcctccagctcaggagacgaccaggactacgac
ctccttcaacagtggggcccgcgcttcaaaaagctgtctgacatgtacggaggaggagag
gattga
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