KEGG   Oncorhynchus mykiss (rainbow trout): 110506405
Entry
110506405         CDS       T07259                                 
Name
(RefSeq) B-cadherin
  KO
K05689  cadherin 1, type 1, E-cadherin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04371  Apelin signaling pathway
omy04514  Cell adhesion molecule (CAM) interaction
omy04517  IgSF CAM signaling
omy04518  Integrin signaling
omy04520  Adherens junction
omy05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    110506405
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    110506405
   04517 IgSF CAM signaling
    110506405
   04518 Integrin signaling
    110506405
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    110506405
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    110506405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:omy03036]
    110506405
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110506405
   04090 CD molecules [BR:omy04090]
    110506405
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    110506405
Cell adhesion molecules [BR:omy04515]
 Cadherins
  Major cadherins
   110506405
CD molecules [BR:omy04090]
 Proteins
  110506405
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_pro Cadherin_FAT4_N RibLong Cadherin_4 Big_13 DUF1366
Other DBs
NCBI-GeneID: 110506405
NCBI-ProteinID: XP_021441668
Ensembl: ENSOMYG00000038855
UniProt: A0A8C7TU78
LinkDB
Position
26:22425893..22441484
AA seq 881 aa
MGAFWFVELGVLTLFLQAFNPGSSEESKCLPGFNSEMYIFKVERNHLQSGRRLGKVVFDD
CTSRTSFLFHSEDSRFKVDGDGTLKLKRGLTLHNGHKEFYVSTQSMGKKIKVPVRVLHEA
RHGHHHHHEMTTQPQPGSSLSLPVLNFPKSSGGLKRRKRDWVIPPINFPENGRGPFPEHM
VQIRSNNDKEVKILYSITGPGADQPPVGLFTVDKNSGFLYVTQPLDRERKDKYILLAHAV
AVGAGTAEAPMEIIVKVIDMNDNKPAFTQDPFMGTVPEASKAGDEVMQVTATDADEEGSA
NSDVRYTILSQEPPLPSPNMFVINPVTGMIRVNAPGLDRENILKYTLQIQAADMEGNGLT
SFGKAIITVTDSNDNAPQFVTPSYTVSVPENKVDALVVKMPVTDGDDPHSSAWATTFKIV
DGDPQGLFNVSTGPSKLEGIITTAKPLDFEKNNKYTLLVTVQNEVPFAVPLPTSTATVIV
NVEDVNEAPVFSPVEKMIKKPEDLPIDSDLVLYTATDPDTARNQKVTYKIRNDLAGWLSI
DKDTGMIKVKSPMDRESTFVQDNKYSVVVLGTDNDEIPATGTGTLIIELEDVNDNPPTID
ERMIKVCNKESTPQLLSITDKDGAGFAAPYTVQLQGSSLSNWTARMNDTKTGIILTLKTM
LDSGDYTVVLRVSDIQGLHQESTIQASVCDCKGADVQCTDKAVAGFGLSSILGILGAILL
LLLLSLLLLMFLRKRGGEKKEPLLQEDDVRDNIYYYDEEGGGEDDQDFDLSVLHRGLDNR
PDVFRNDIAPTMARPEYRPRPANPADIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGS
EAGSLSSLNSSSSGDDQDYDLLQQWGPRFKKLSDMYGGGED
NT seq 2646 nt   +upstreamnt  +downstreamnt
atgggtgccttttggttcgtggagttgggggtattaacattgtttctccaggcattcaat
ccagggtcgtcggaggagtcaaaatgtctaccgggtttcaattcagaaatgtacattttc
aaagtagaaagaaatcacttacaaagtggccggagactaggaaaagtggtttttgatgac
tgcaccagccgcaccagctttctctttcactccgaggattcacgcttcaaagtagatggc
gacgggacgctgaaactgaagagggggctgactctgcataatggacataaggagttctat
gtctctacccagtccatgggcaagaagatcaaggttccagtcagagtgctgcatgaggcc
agacacggccaccaccatcaccatgagatgaccacccagccccagcccgggtcaagtctg
tctctacctgttctgaacttccccaagtcttcaggaggtctgaaaagaaggaagagggac
tgggtcattcctcccatcaacttcccagagaatggcagaggccccttcccagaacatatg
gtgcagatcaggtccaacaatgataaagaggtgaagatcctgtacagcatcactggtcct
ggggctgaccaacctcctgtgggactcttcactgtggacaaaaactcggggtttctctat
gtgacccagcctttggacagggagagaaaagacaaatacattctcctagcccatgctgtt
gcagtgggtgcaggtacggctgaggcacccatggagatcattgtgaaagtcatcgatatg
aatgacaacaaacctgcatttacccaagatccatttatgggaacagttcctgaagcatca
aaagcaggtgatgaggtcatgcaagtaacggccactgatgctgatgaggagggctctgcc
aattctgatgtcagatacaccattctcagtcaggagcctccactaccaagccctaacatg
tttgtcatcaaccctgtgaccggaatgattcgggttaatgcacctgggttggacagagag
aatattcttaagtatactttgcaaatccaagctgccgatatggagggaaatggccttacc
agctttggcaaagccatcattacagtaacggacagcaatgacaatgcgccacagtttgtg
acgccttcgtacaccgtgtcagtcccagagaataaagtggatgccttggtggtgaaaatg
ccagtgactgatggggatgatcctcactcctctgcctgggccaccaccttcaagatagtt
gacggggaccctcaaggccttttcaatgtgagcacaggccctagcaagctggaaggcatc
atcacgacagcgaagccgcttgactttgagaagaacaacaagtacactctgctggtcact
gtgcagaatgaagtcccatttgccgtccccctgcccacctccactgctactgttatagtg
aatgtggaggatgtgaatgaagctccagtcttcagtccagtggagaagatgatcaaaaaa
cctgaggacctccctattgacagtgacctggttctgtacaccgccacagacccagacact
gcaaggaatcagaaagtcacatacaagatacgcaatgatcttgctggatggctcagtatc
gacaaagacactgggatgatcaaagtcaagagccccatggacagagaatccacttttgtc
caagacaacaaatactctgttgttgttctgggcactgacaacgatgaaatcccagcaact
ggcactggcacccttatcatagagctggaggatgtgaatgacaaccctccaaccatcgac
gagaggatgattaaggtctgcaacaaggagtccaccccacagctgctgtcaatcactgat
aaagacggagcaggcttcgctgctccatacacagtacagcttcaggggtcgtccctttcg
aactggactgccagaatgaatgacacaaaaacgggcattatcctgacactgaagactatg
ttggacagtggagattacacggttgtcctgagagtgtctgacatccagggcctgcaccag
gagagcaccatccaggcctctgtgtgtgactgcaaaggagctgatgtccagtgcaccgat
aaagctgtagcaggcttcggcctctctagcattctgggaattctaggagccattttacta
ctcctattgttgtctcttctgctgctcatgttcctgaggaagagaggtggtgagaagaag
gagcctctgctgcaggaggacgatgtcagggacaacatctactactacgacgaggaggga
ggtggcgaggatgaccaggatttcgacttgagtgttctgcacagaggtctggataaccgt
cctgatgttttccgtaatgacatcgctccaaccatggcccggccagagtatcgcccacga
cccgccaacccagccgacattggcaacttcattgatgataacctgaaggcagctgacaac
gaccccactgctcctccctacgactccctcctggtgtttgactatgaaggaggtggctct
gaggccggctccctcagctccctcaactcctccagctcaggagacgaccaggactacgac
ctccttcaacagtggggcccgcgcttcaaaaagctgtctgacatgtacggaggaggagag
gattga

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