KEGG   Oncorhynchus mykiss (rainbow trout): 110506420
Entry
110506420         CDS       T07259                                 
Name
(RefSeq) cadherin-15 isoform X1
  KO
K06809  cadherin 15, M-cadherin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514  Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    110506420
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110506420
Cell adhesion molecules [BR:omy04515]
 Cadherins
  Major cadherins
   110506420
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_FAT4_N Sde0182_C OCD_Mu_crystall Cadherin_4
Other DBs
NCBI-GeneID: 110506420
NCBI-ProteinID: XP_021441688
Ensembl: ENSOMYG00000041577
UniProt: A0A8C7TY78
LinkDB
Position
26:22833360..22855406
AA seq 811 aa
MLAQEMTSRGLAVLCVLVAGLGQVGSSSQAGREDLNPVVLYPWRQRSSGGLSRVKRDWII
PPIRVLENSKQVPENLVQIKSDKIFTGEVIYKLEGPGVDQDPKDLFEIDDKTGWIRSMIP
LDREKNRSFTLKAFALSPSGERLENPSTIEIVVLDQNDNRPNFSQKEFAGSVSEFSVPGT
SVMSVTATDADDPTTDNAILSYSIIGQESIPPLRINKTMFGINNETGAIYTRDVGLDWEV
VKGFRLTLQVADMSGMGLTSLANAVIHVTDINNNPPRFSPDLYTMSAVENKVDFVIGWVN
ATDNDEPGTGNWETKYTIAKGNPSRNFAIRTDPVTNEGILSVLKALDYETQEVYTLTLTV
ENVNPLSIKAPKDPVSSATVVVTVVNENEAPRFNKDPIEIVVLESVEPGTVLASNIAYDP
DNAKLKYDILRDPEGWLIINHETGEITARKPFNVRSPHVKNNIYNAVIRVTDTDAGGIST
TASLVITLRETNDFFPQLFPLMGTVCSESGRETSGLFLSAVDVDLPPHAEPFTFQLQDIN
VSANWTIIHVNETHAVLRPLVELETGEYAVTVLVTDSGTPSLGAYAQVNVTLCPCGKDSE
CKTEAAAIFGTRVGVSFIALLVIMASIALLLLLLLLAVAVGNCRRHHMKKGEGLLVGESD
EDIRDNVLNYDEQGGGEEDENAFNIDLLRNPVDVGPLPISFYPPITGIPRGKQPLRKDYP
DNLPSPSYPRKPPAVPTDIEDFINDGLEAADHDPNVPPYDTALIYDYEGDGSLAGSLSSI
ASASSDGDQDYDYLNDWGPRFKKLANMYDPR
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgctggcacaggagatgacatcaagggggttggcagtgctgtgtgtgctggtggctggc
cttggtcaggtcgggagcagcagccaagcgggcagggaggaccttaacccagtggtcctg
tatccatggagacagaggagcagtggaggtctgagcagggtgaagagggactggatcatc
cctccaatcagggtgctggagaacagcaagcaagtccctgaaaacctggtccagatcaaa
tcagacaagattttcactggagaagtgatctacaagctggaaggaccaggggttgaccag
gaccctaaggacctgtttgagatagacgataaaacgggctggatcaggagcatgattccc
ctggacagagagaaaaacagaagcttcacgctgaaagcctttgccctgtcgcccagtgga
gagagactggagaatccctccaccatagagatcgtagtgctggatcaaaatgataaccgg
cccaacttctcccagaaagagtttgctggatccgtttctgaattctccgtgccaggcaca
tctgtgatgtctgtgactgcgactgatgctgacgacccaaccacagataacgctatcctg
agctactccatcattggccaggagagcatcccgcctctccgcatcaataagaccatgttt
ggcatcaacaacgagacaggggccatttacacacgagacgtgggcctagactgggaggtg
gttaaaggttttaggttgacactgcaggttgctgacatgtcaggcatggggttaaccagt
cttgccaatgcagtcatacatgtgactgacatcaacaacaatcccccacgattctcccca
gacctgtacactatgtcagctgtggagaacaaagtagacttcgtgattggctgggtcaac
gccacagacaatgatgagccagggacaggaaactgggagaccaaatacactatcgccaag
ggcaacccctccaggaactttgccattcgaacagaccctgtgaccaacgagggtattctg
tcagtgctgaaggctctggactacgagacccaggaggtgtatactttgactctgacagtg
gagaatgtgaaccctctcagcatcaaggcccccaaggaccccgtaagcagtgccacagtg
gtggtgaccgtggtgaatgagaacgaggccccacgcttcaataaagaccccatagagatc
gtggttcttgagtctgtggaacctggcaccgtgctggccagtaacatcgcctacgatcct
gataatgcaaaactcaagtatgacatactcagagatcctgagggatggcttataatcaat
cacgagactggagaaatcacagccaggaaaccgttcaatgtccgctcccctcacgtcaag
aacaacatttacaatgcagtcatcagagtcacagacacagatgctggtggaatctcgacc
acagcgtctctggtgatcacgttgcgggagaccaatgacttcttccctcagctgttcccc
ctgatggggacggtgtgcagcgagtcaggccgggagacatctggtctgttcctgagtgct
gtggatgtggacctgccccctcatgctgaacccttcaccttccaactgcaagacatcaat
gtgtctgccaactggaccatcatacatgtcaacgagactcatgcagtgctgcgacccctg
gtagagctggagacaggggaatatgctgtcactgtgttggtgactgactctggcacccct
agtctcggtgcatatgctcaggtcaatgtgactctgtgtccgtgtgggaaagacagtgaa
tgtaagactgaagcagctgccatattcggaacacgagttggtgtcagcttcatcgcctta
ctggtcatcatggccagcatcgcactcctgctgctgctgctgctcctggctgtagccgtg
ggtaactgcagacggcatcacatgaagaaaggagaggggctgctggtgggggagtcagac
gaagacatccgtgacaacgtcctgaactatgacgagcagggtggtggagaggaggatgag
aatgccttcaacatagacctactgaggaacccagttgatgtgggaccactcccaatatcc
ttctaccctcccatcactggcatccccaggggaaagcagccactcaggaaagactaccca
gacaacctgccctccccctcgtatccacggaaacccccagcggtccccactgacattgag
gacttcatcaatgatggcctggaggcagcagaccatgaccccaacgtccctccctacgac
acagctctgatctatgactacgagggtgatggctccctggcaggcagcctgagctccatc
gcctcagccagctcagacggcgaccaggactatgactacctcaacgactggggaccacgc
tttaagaaactggccaacatgtacgacccacgctaa

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