Oncorhynchus mykiss (rainbow trout): 110506420
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Entry
110506420 CDS
T07259
Name
(RefSeq) cadherin-15 isoform X1
KO
K06809
cadherin 15, M-cadherin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110506420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110506420
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Major cadherins
110506420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Sde0182_C
OCD_Mu_crystall
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
110506420
NCBI-ProteinID:
XP_021441688
Ensembl:
ENSOMYG00000041577
UniProt:
A0A8C7TY78
LinkDB
All DBs
Position
26:22833360..22855406
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AA seq
811 aa
AA seq
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MLAQEMTSRGLAVLCVLVAGLGQVGSSSQAGREDLNPVVLYPWRQRSSGGLSRVKRDWII
PPIRVLENSKQVPENLVQIKSDKIFTGEVIYKLEGPGVDQDPKDLFEIDDKTGWIRSMIP
LDREKNRSFTLKAFALSPSGERLENPSTIEIVVLDQNDNRPNFSQKEFAGSVSEFSVPGT
SVMSVTATDADDPTTDNAILSYSIIGQESIPPLRINKTMFGINNETGAIYTRDVGLDWEV
VKGFRLTLQVADMSGMGLTSLANAVIHVTDINNNPPRFSPDLYTMSAVENKVDFVIGWVN
ATDNDEPGTGNWETKYTIAKGNPSRNFAIRTDPVTNEGILSVLKALDYETQEVYTLTLTV
ENVNPLSIKAPKDPVSSATVVVTVVNENEAPRFNKDPIEIVVLESVEPGTVLASNIAYDP
DNAKLKYDILRDPEGWLIINHETGEITARKPFNVRSPHVKNNIYNAVIRVTDTDAGGIST
TASLVITLRETNDFFPQLFPLMGTVCSESGRETSGLFLSAVDVDLPPHAEPFTFQLQDIN
VSANWTIIHVNETHAVLRPLVELETGEYAVTVLVTDSGTPSLGAYAQVNVTLCPCGKDSE
CKTEAAAIFGTRVGVSFIALLVIMASIALLLLLLLLAVAVGNCRRHHMKKGEGLLVGESD
EDIRDNVLNYDEQGGGEEDENAFNIDLLRNPVDVGPLPISFYPPITGIPRGKQPLRKDYP
DNLPSPSYPRKPPAVPTDIEDFINDGLEAADHDPNVPPYDTALIYDYEGDGSLAGSLSSI
ASASSDGDQDYDYLNDWGPRFKKLANMYDPR
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgctggcacaggagatgacatcaagggggttggcagtgctgtgtgtgctggtggctggc
cttggtcaggtcgggagcagcagccaagcgggcagggaggaccttaacccagtggtcctg
tatccatggagacagaggagcagtggaggtctgagcagggtgaagagggactggatcatc
cctccaatcagggtgctggagaacagcaagcaagtccctgaaaacctggtccagatcaaa
tcagacaagattttcactggagaagtgatctacaagctggaaggaccaggggttgaccag
gaccctaaggacctgtttgagatagacgataaaacgggctggatcaggagcatgattccc
ctggacagagagaaaaacagaagcttcacgctgaaagcctttgccctgtcgcccagtgga
gagagactggagaatccctccaccatagagatcgtagtgctggatcaaaatgataaccgg
cccaacttctcccagaaagagtttgctggatccgtttctgaattctccgtgccaggcaca
tctgtgatgtctgtgactgcgactgatgctgacgacccaaccacagataacgctatcctg
agctactccatcattggccaggagagcatcccgcctctccgcatcaataagaccatgttt
ggcatcaacaacgagacaggggccatttacacacgagacgtgggcctagactgggaggtg
gttaaaggttttaggttgacactgcaggttgctgacatgtcaggcatggggttaaccagt
cttgccaatgcagtcatacatgtgactgacatcaacaacaatcccccacgattctcccca
gacctgtacactatgtcagctgtggagaacaaagtagacttcgtgattggctgggtcaac
gccacagacaatgatgagccagggacaggaaactgggagaccaaatacactatcgccaag
ggcaacccctccaggaactttgccattcgaacagaccctgtgaccaacgagggtattctg
tcagtgctgaaggctctggactacgagacccaggaggtgtatactttgactctgacagtg
gagaatgtgaaccctctcagcatcaaggcccccaaggaccccgtaagcagtgccacagtg
gtggtgaccgtggtgaatgagaacgaggccccacgcttcaataaagaccccatagagatc
gtggttcttgagtctgtggaacctggcaccgtgctggccagtaacatcgcctacgatcct
gataatgcaaaactcaagtatgacatactcagagatcctgagggatggcttataatcaat
cacgagactggagaaatcacagccaggaaaccgttcaatgtccgctcccctcacgtcaag
aacaacatttacaatgcagtcatcagagtcacagacacagatgctggtggaatctcgacc
acagcgtctctggtgatcacgttgcgggagaccaatgacttcttccctcagctgttcccc
ctgatggggacggtgtgcagcgagtcaggccgggagacatctggtctgttcctgagtgct
gtggatgtggacctgccccctcatgctgaacccttcaccttccaactgcaagacatcaat
gtgtctgccaactggaccatcatacatgtcaacgagactcatgcagtgctgcgacccctg
gtagagctggagacaggggaatatgctgtcactgtgttggtgactgactctggcacccct
agtctcggtgcatatgctcaggtcaatgtgactctgtgtccgtgtgggaaagacagtgaa
tgtaagactgaagcagctgccatattcggaacacgagttggtgtcagcttcatcgcctta
ctggtcatcatggccagcatcgcactcctgctgctgctgctgctcctggctgtagccgtg
ggtaactgcagacggcatcacatgaagaaaggagaggggctgctggtgggggagtcagac
gaagacatccgtgacaacgtcctgaactatgacgagcagggtggtggagaggaggatgag
aatgccttcaacatagacctactgaggaacccagttgatgtgggaccactcccaatatcc
ttctaccctcccatcactggcatccccaggggaaagcagccactcaggaaagactaccca
gacaacctgccctccccctcgtatccacggaaacccccagcggtccccactgacattgag
gacttcatcaatgatggcctggaggcagcagaccatgaccccaacgtccctccctacgac
acagctctgatctatgactacgagggtgatggctccctggcaggcagcctgagctccatc
gcctcagccagctcagacggcgaccaggactatgactacctcaacgactggggaccacgc
tttaagaaactggccaacatgtacgacccacgctaa
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