Oncorhynchus mykiss (rainbow trout): 110506502
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Entry
110506502 CDS
T07259
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110506502
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110506502
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110506502
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110506502
Ubiquitin system [BR:
omy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110506502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
110506502
NCBI-ProteinID:
XP_021441830
Ensembl:
ENSOMYG00000028279
LinkDB
All DBs
Position
26:complement(26207955..26230654)
Genome browser
AA seq
1392 aa
AA seq
DB search
MEMVPSEENQLVPKEGMFWSCRQSIFNEMKKRFSQIENAAEEPRVLCIVQDTTNAKTVNE
RLTLNLPASTTLPKLFEDVAHKAGYVNGTFDLAWRKTGDMGSLDPSSEMSLTEFGFEPGK
RNFLQLTDKDGEQPQIASDELGTAGSSGLDDSSQERFIGPLPRDCTVGCSSDYSSPSYSY
SSILNKSDTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQL
QRLFLLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQQQF
SPLTADLINQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYGSVEEALQA
FVQPETLDGANQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM
SFPEELDMGPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSADDGVDEGICLDSA
SSTERVLKPKSSLTFELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSKITQEDI
RKTYGGSSGSRGYYSSAFASSTNAYMLIYRLKDPSRNAKYLDCDDFPEHIKHLVQREKES
EEQEKRQREIERNTCKIKLFCMHPVKMMAMMENKLEVHKDKTLREATEMAYKLMELDGVV
PLDCCRLVKYDEFHEYLERSYEGEEDTPMGLLLGGVKSSYMFDLLLETRRPEQVFQPYKP
GEVMVKVHVVDLKTDTVAPPVSIRAYLNQSITEFKQLIAQATELSAETMRVVLERCYNDL
RLLYVPNKTLKAEGFFRSNKVFVESSESPDHQVTFTDSLLWKLLDRHGNTIRLFVSLPVQ
SPGTNRTICQKVGGDPEECSEGSKGNRNSVETILEESTEKLKNLSLQPQQGSSTSDSQKS
SDTSDFEQIESPSPSQEPDSSSVSAVVAVDNRELENRIRVASGGGAYSDPETQFPGEERS
DSEVNNDRSTSSVDSDILSSSHSSDTLCNADSGPIQLANGLDSHSITSSRRSKANEGKKE
TWDTAEEDSGTDSEYDENGKSKAESYYLYFRAEPYAQEDGSGEGGQKCVLVHVDKRITLS
AFKQNLEPFVGVTSTQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEY
RVKVYQLLVNDAEPCKFLVDTVFAKGMTVKQSKEELMPQLKDQCKLDLNIDKFRLRKKTW
KNPGTVFLDYHVYEEDINISSNWEVFLEVLDGPEKMKSMSQLAVLTRRWTPAQMKLEPFQ
EVVLESSSVEELKEKLSEISGVPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNV
WPLYICDDGAVVFYRDSTEEPMEQSEDERNELMKKESSRLLKTGHRVSYSPRKEKALKIY
LDGGPVKDPGQD
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaagagaaccagctcgtaccgaaagagggtatgttttggagt
tgcaggcagagtattttcaatgagatgaagaagaggttttctcagatagagaatgcggcg
gaggagcccagagtgctgtgcatagtccaggacactaccaatgctaagacagtcaacgag
aggctcaccctcaacttgccagcctccaccaccctccccaaactctttgaggatgtggcc
cacaaggcgggctatgtgaacggcacctttgacctggcatggcgcaagacaggggacatg
ggttcgctggatcccagcagtgagatgtccctcactgagttcgggtttgagcccgggaag
aggaacttcctccagctcacagacaaggacggagaacagcctcagattgcatcggatgag
ttggggacagcgggcagcagtggtctggatgacagctcccaggagcgcttcatcggccct
ctgcccagagactgcacggtgggctgcagcagtgactacagcagccccagctactcctac
tcctccatcctcaacaagtctgacacaggatatgtgggtttggttaaccaggccatgacc
tgctatttgaacagccttctacaaacactgtttatgaccccggagttcagaaatgcactg
tacaactgggagtttgaggagtcggaggaagacccggttaccagcatcccttaccagcta
cagaggctgtttttgctgctgcagaccagtaagaagagggccatcgagaccaccgacgtg
acccgcagcttcggctgggacagcagcgaagcctggcagcagcatgacgtccaggagctg
tgtagggtcatgtttgatgccttggagcagaaatggaagcagacagagcagcagcagttt
tctccacttacggctgacctgattaaccagctgtaccaggggaagctgaaggactatgtg
cgctgtctggagtgtggctatgagagctggaggatcgacacctacctggacatccctctg
gtcatcagaccatttggggccagccaggcttatggcagcgtggaggaggctctgcaggcc
ttcgttcagccagagactctggacggggccaaccagtacttctgtgagcgctgcaagaaa
aaatgtgatgcccgaaaggggctgagatttctgcactttccctacctgctgactctgcag
ctgaagcgttttgactttgactacaccactatgcaccgcatcaaactcaatgaccgcatg
tccttccctgaggagctggacatgggtcccttcatcgacgtggaggacgagaaatctcct
caaacggagagctgcactgacagcggggcagagaatgaaggcagttgccacagcgaccag
atgagcaacgacttctcggcggacgacggtgtggatgagggcatctgcctggacagcgcc
agcagtactgagagggtcctgaagccaaagagttcattgacctttgagctgttctcggtc
atggtgcattcgggcagcgctgcaggtggccactactatgcctgcattaagtccttcagc
gatggccagtggtacagtttcaacgaccagcacgtcagcaagatcacccaggaagacatc
aggaaaacgtatggagggtcctcggggagcagaggctattactccagtgcctttgccagc
tctacgaatgcgtatatgctgatttataggttgaaagacccctcaaggaatgcaaagtat
ctggattgtgatgacttccctgagcacataaagcatctggtccagagggagaaggagtct
gaggagcaggagaaaagacagagggagatcgagcgcaatacctgcaagatcaagctgttc
tgcatgcatccggtgaagatgatggctatgatggagaacaagctggaagtgcacaaggac
aagacgctcagagaggcaacagagatggcctacaagctcatggaactggatggggtggtc
ccgctggactgctgtcgcctggtcaagtacgatgagttccatgagtacctggagcgctcg
tacgagggtgaggaggacacccccatggggctgctgctgggcggggtcaagtcctcctac
atgtttgacctgctgctggagacgcgcagaccagagcaagtcttccagccatacaaaccc
ggagaggtgatggtgaaggttcacgtggtggatctgaagactgacactgttgcccctccc
gtcagcatcagggcctacctaaaccagtcaatcactgagttcaagcagctcattgcacag
gccacagagctctcagctgaaaccatgcgtgtcgtcctggagcgctgctataatgacctt
cggcttctctacgtgcccaacaagacattgaaagcagagggtttcttcaggagcaacaag
gttttcgtggaaagctctgaatccccagatcaccaggtcactttcactgattccctcttg
tggaaactgctggatcgccatgggaacacaatccgcctgtttgtctcgctgcctgtgcaa
tcccccggcaccaacagaactatttgccaaaaagtgggcggcgaccctgaggagtgctct
gaggggtcaaagggcaacaggaattctgtagagaccatcttggaggagagcacagaaaag
ctgaagaacctgtccctccagccgcagcagggctccagcaccagtgacagccagaagagc
tcagacaccagcgacttcgaacaaattgagtccccctcaccttctcaggaaccagactcc
tcctccgtatctgctgtcgttgcagtcgacaaccgagagctggagaaccggatccgggtg
gccagcggtgggggggcctactccgacccggaaacccagttccctggggaggagcgctcg
gactctgaggtgaacaacgatcgcagcacgagctcagtggacagtgacatcctgagctcc
agccacagcagtgacacgctgtgcaacgccgacagcggccccatccagctggccaatggc
ctggactcacacagcatcaccagcagccgccgctccaaggccaatgagggcaagaaggag
acgtgggacacagccgaggaggacagtggcacggacagcgagtatgatgagaatgggaag
agcaaggcggaatcctattacctctacttcagagcagaaccatatgcacaggaggacggc
tctggggaaggaggccagaaatgtgtactggtccacgtggataagaggataactctgtca
gcgttcaaacagaacctggagcctttcgtgggggtcacctctacccagttcaaggtgttc
cgcgtctacgccaacaaccaggagtttgagagtgtacggctcaacgagaccctctcctcc
ttctctgacgacaacaagataaccattcgattaggcagagcactgaagaagggcgagtat
cgggtgaaagtgtaccagctactagtgaatgatgcagagccctgtaagttcctcgtagac
acagtgtttgctaagggcatgactgtgaaacagtccaaagaggagctaatgcctcagctg
aaagaccaatgcaagctggacctcaacatcgacaagttccgtctcaggaagaagacgtgg
aagaacccagggacagtgtttctggactaccacgtctacgaggaggacatcaacatctcc
agtaactgggaggtctttttggaggttttagatggaccagagaagatgaagtccatgtcc
cagctggctgtgctgacccgccgctggacccccgcccagatgaagctggagcccttccag
gaagtggttctggagagcagcagtgtggaggaactcaaggaaaagctcagtgaaataagt
ggtgttcctcttgaaaacctggagtttgccaaggggcgaggaacatttccttgtgatatc
tcggtattggagatccatcaggatctggactggaaccctaaagtgtccactctgaatgtg
tggcctctgtacatctgtgatgatggtgctgtggtcttctacagggacagcacagaggag
cctatggaacagtctgaagacgaacgcaatgagctgatgaagaaggagagcagccggctg
ctgaagactggccaccgggtcagttactcacctcgtaaggagaaggcccttaagatctac
ctggatgggggcccggtcaaggacccggggcaggactga
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integrated database retrieval system
