Oncorhynchus mykiss (rainbow trout): 110506509
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Entry
110506509 CDS
T07259
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110506509 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
omy01007
]
110506509 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omy03016
]
110506509 (kars1)
Enzymes [BR:
omy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
110506509 (kars1)
Amino acid related enzymes [BR:
omy01007
]
Aminoacyl-tRNA synthetase
Class II (A)
110506509 (kars1)
Transfer RNA biogenesis [BR:
omy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
110506509 (kars1)
Prokaryotic type
Other AARSs
110506509 (kars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
110506509
NCBI-ProteinID:
XP_021441844
Ensembl:
ENSOMYG00000031720
UniProt:
A0A8C7SW19
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All DBs
Position
26:26414099..26425103
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AA seq
610 aa
AA seq
DB search
MLTLVVRTARHQVCQAFGVRAQGVKFALPSTVSVPALIQGNRCRGDKSELKRRMKAEKKA
SEKEAKVKEQVEQKQTNDQAVQNAYGADEETLDPNQYFKIRSQAIQALKGTAEDPYPHKY
NVDLSLTGFIEKYNHLQPGDQLTDIVLNVSGRVHAKRESGAKLIFYDLRGEGVKLQVMAT
NRGYKSEEEFVRINNKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFG
LKDKETRFRQRYLDLILNDYVRQKFVTRAKIITYLRSFLDGLGFLEIETPMMNLIPGGAV
AKPFVTYHNDLDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCE
FYMAYADYHDLMDITEKLLSGMVKHITGEYKVKYHPEGPEGPTYEIDFTPPFRRVSMTHD
LEKEMGVKFPAADTYDSDDTRKFFDELCAQKGVECPPPRTTARLLDKLVGDFLEVTCINP
TFICDHPQIMSPLAKWHRSEKGLTERFELFVLKKEICNAYTELNDPIRQRELFEQQAKAK
AEGDDESMSIDETFCTALEYGLPPTAGWGMGLDRLTMFLTDSNNIKEVLFFPAMKPDDNK
TAPLTEGTSV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctgactctggtggtcaggactgccaggcaccaggtgtgtcaagcctttggggtcagg
gctcagggggtaaagttcgctctccccagcacagtgtcagtcccagctctaattcagggg
aatcgctgtcgaggtgacaaaagtgagctgaagaggcgaatgaaagctgagaagaaggca
tctgagaaggaagccaaagtcaaagagcaggttgagcagaagcagaccaatgaccaggca
gttcagaatgcatacggggcagatgaggagaccctggaccctaaccaatactttaagatc
cgcagtcaagccatccaggctctgaagggcacagcagaggacccataccctcacaagtac
aatgtagatctgtcgctcacagggttcattgagaaatacaaccacctacagcctggagac
cagctaacagacattgtcctcaatgtatcaggtcgtgttcatgccaagagagagtccggg
gccaagttaatcttctatgacttgcgaggggaaggcgtcaagctgcaagttatggccacc
aacaggggctacaagtctgaggaggagtttgtacgcatcaacaacaagctgcggcgtggt
gacatcatcggtgttcgtggtaatccagggaagaccaaaaagggcgagttgagcataatt
cccatagagatgaccctgctttcaccttgcttgcacatgctgccccacctccactttggt
ctcaaggacaaggaaacacgatttcgccagcgatacctggatctgattctcaatgactat
gtgaggcagaagtttgtaacacgtgccaagatcatcacttacctccgcagcttcctggat
gggctgggattcctggagattgagacgcccatgatgaacctgattcctggtggggccgtg
gccaaaccctttgtgacctaccataatgacctagacatgaacctttacatgaggatcgct
cctgagctctaccacaagatgcttgtggttggggggattgacagagtgtatgagattgga
cggcagttcagaaacgaaggcattgacctcacccacaatccagagttcaccacctgcgaa
ttctatatggcctatgcagattaccatgacttgatggatatcacagagaagcttctctcg
gggatggtcaagcacatcactggagagtacaaagtgaagtatcatccagagggtccagag
ggcccgacctatgagatcgacttcactcctcccttcaggagggtcagcatgacgcacgac
ctggagaaggagatgggcgtcaagttcccagctgctgacacctacgacagtgacgacaca
cgtaaattctttgatgaactgtgtgcccagaaaggagtggagtgccctcctcctagaacc
actgcccgcctccttgacaagttggtgggagatttcctggaagtcacgtgtatcaacccc
acgttcatctgtgaccacccacagatcatgagccccctggccaaatggcaccggtcagag
aaaggcctgacggagcgttttgagctgtttgtattgaagaaggagatttgtaatgcctac
actgagttgaacgaccctatcagacagagggagctctttgagcaacaggctaaggccaag
gcagagggtgatgacgaaagcatgtccattgatgagactttctgcacggcactagagtat
ggcctgccaccaactgctggctggggcatgggccttgaccgtcttaccatgttcctcaca
gactccaacaacatcaaggaggtgctgttcttcccagccatgaagcctgatgacaacaag
acagcccctctcacagagggcacctctgtgtag
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