Oncorhynchus mykiss (rainbow trout): 110506526
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Entry
110506526 CDS
T07259
Name
(RefSeq) AP-1 complex subunit gamma-1 isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
110506526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110506526
Membrane trafficking [BR:
omy04131
]
Endosome - Golgi transport
Others
AP-1 complex
110506526
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
Kinetochor_Ybp2
Ltn1_1st
Motif
Other DBs
NCBI-GeneID:
110506526
NCBI-ProteinID:
XP_021441872
Ensembl:
ENSOMYG00000040726
LinkDB
All DBs
Position
26:complement(27600225..27628845)
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AA seq
822 aa
AA seq
DB search
MRMPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHM
LGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYV
QGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPA
TKNLLSEKNHGVLHTSVVLLTEMCERSPDMLLHFRKNEKLVPQLVRILKNLIMSGYSPEH
DVSGISDPFLQVRILRLLRILGRSDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLT
IMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLK
DLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCDPEFKADCASGVFLAAEKYAPSK
RWHIDTIMRVLTTAGSYVRDDSVPNLIQLITNSVEMHAYTVQRLYKALLDDISQQPLVQV
SSWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDVLEGLLVSNLSTPVTRGYSLTAIMKLST
RFSSVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPIMEKTASNGPT
EIVQTNGETEPSVPDTKHPPLVTQPANQANDLLDLLGGNDVVPVIQTTLPTKPASAGGEL
LDLLGDLSLSSGPAPAPSVPISQPPFLLDGLSSQPLFNDISAAIPPMTAYSKNGLKIEFT
FERANPNPNIAVITIHATNTTEADMTEFVFQAAVPKTFQLQLLSPSSNIVPALNQGSVTQ
VIRVLNPQKQQLRMRVKLTYTHKGSPIQDLAEVNNFPPQSWQ
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgccagcgccgatcagactgcgggagctgatccggaccatccggacggctcgg
acccaggcagaggagcgtgagatgatccagaaagagtgtgctgccatacgctcgtccttc
agagaggaagacaacacttaccgctgtagaaatgtggctaagctactctacatgcacatg
ctgggctacccagcgcactttgggcagcttgagtgcctgaagttgattgcgtcccagaag
ttcactgacaagcggatagggtacctgggagccatgctactgttggatgagaggcaggac
gtccatctactaatgacaaactgcatcaagaatgatctgaatcacagcacacagtatgtc
cagggcctggccttgtgcaccctgggctgcatgggttcctcagagatgtgtcgagacctg
gctggagaggtggagaagctgctcaaaacctccaactcctacctgaggaaaaaggcggcg
ttgtgtgcagtccacgtcatcaggaaggtcccagagctgatggagatgttcctcccagcc
acaaagaacctgctgagtgagaagaaccacggtgttctccacacttctgttgtcctcctc
actgaaatgtgtgaaagaagtcctgacatgctcttacacttcagaaagaatgagaagttg
gttccacagctggtgagaatcctgaagaacctgatcatgtctggttactctcctgagcat
gatgtgtctggcatcagtgaccccttcctgcaggtgcggatattgagactattacgaatt
ctgggcaggagtgatgacgactcaagtgaagcaatgaatgacattcttgcacaggtggca
accaacaccgagaccagtaaaaatgtaggcaatgcaatcctctatgagacagtactgacc
ataatggacatcaaatcagaaagtggattgagggtgttggccatcaacatactgggacgc
ttccttctcaacaatgacaaaaatattagatatgtggcactgacgtccctactgaagact
gtacagacggaccacaatgcagtgcagaggcatcggagcaccattgtggactgtctaaaa
gacttggatgtgtccatcaagaggcgtgcgatggagctgagcttcgccctggtgaatggg
aacaacatccgaggcatgatgaaggagctgctctacttcctggactcctgtgacccagaa
ttcaaagcggactgtgcatccggagtcttcctggctgcagagaagtatgcgccttcaaaa
agatggcacattgacaccatcatgagagtcctgacaacggcggggagctatgtccgagac
gactctgtccccaacctcatccagctcatcaccaacagtgtggagatgcatgcctacacg
gtacagagactctacaaagccctgctggatgacatctcacagcaaccactggtccaggtg
tcatcctggtgtataggggagtatggagacctgctggtatctggacagtgtgaggaggag
gagcccatccaggtgacagaggatgaagtcctggatgttttggaaggtcttcttgtgtcc
aacttgtccaccccagtaacccgtggttactccctcactgccatcatgaagctgtctact
cgcttcagcagtgtcaaccgaatcaagaaggtggtgtcaatatacggcagcagcatcgac
gtggagctgcaacagagagctgtggagtacaatgcacttttcaagaaatatgatcacatg
aggcctgccttactagagcgaatgcccatcatggagaaaacagcctccaatggccctaca
gagattgtgcagaccaatggggagacagagccctcggtgcctgacacaaaacaccccccc
ctagtcacccagccagccaaccaggctaatgacttgttagacctgctgggaggtaatgat
gtggtgcctgtgatccaaaccaccctgcccaccaagcctgcctcggctggaggagagctg
ctcgacctattgggggacctctcactgtctagtggtccagctcctgccccctctgtgccc
atctcccagccccccttcctcctggatggcctctcctcacagcccctgtttaatgatatt
tcagcagctattccccccatgacagcgtatagcaagaatggcctgaaaatagaattcacc
tttgagagggccaatccgaacccgaacatagcagtcatcactatccacgccaccaacacc
accgaggctgacatgacagagtttgttttccaggctgcggttccaaagacattccagctg
cagctcttgtcccctagcagtaatattgtcccagcactcaaccagggaagcgtcacacag
gtcatcagagttctcaacccacagaagcaacaactccgcatgagggtcaagctgacgtac
acccacaaaggctcacctatccaagatctggccgaggtcaacaactttcctcctcagtcc
tggcaatga
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