Oncorhynchus mykiss (rainbow trout): 110506540
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Entry
110506540 CDS
T07259
Name
(RefSeq) cingulin-like protein 1
KO
K21110
cingulin-like protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110506540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_tail_1
Filament
Laminin_II
Motif
Other DBs
NCBI-GeneID:
110506540
NCBI-ProteinID:
XP_021441903
Ensembl:
ENSOMYG00000046818
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Position
26:complement(28220174..28263156)
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AA seq
1331 aa
AA seq
DB search
MESYRVNQPARSSRPHNGAGSYGLSIRVQGIDGHPYVVLNNQDCGSNSYTDPNSNGYNDT
QGSFIDNYHEYDFKGSREAVSDSPFVEYRSQKQMQFGGSHNGVTEQGKKPASTLLNFQRH
PEILKPYDPENNTLNLDCNHSLPPRPMSLAETGSTYQGSSPRSTSPVVAHAGSSSLDHRR
SPALQERTQPQPQPQPQTQPQPKPQPQPAPSKPQTKRVQSQSKPQAQLAQPQSKPQTQVA
QPQSKLKHLSKPQPQSLPQSKPQSPPQSQSPPQSQLPQRVPIPQPYAVSRPPSEQTKASC
RSASSISSANSSLERSRHEPDILPLRRVDSSGPVLQSSSRSRHSSTSSTDQLEALYADTI
NRHQNRRYIPFQPGTGRDIDTGSIPGVDELIDKFDGKDGGHQRRGRAGRRNRINPEDRKR
SRSVDSALPFSLRGESEYMDEFSKNQGRSTEHVLRPSQLHLQKVSGSKDSWVTAVEGKPS
AKASACGSSAPGSPQSMTSKAAGSIQGYKVVLNRSSTLPLDSTDAEDGQSSPNTKILTSV
ATTSLSKPSSNFVKKPNAEMDVQVTPDLLKGQQELSQQTHEETAKQILFNYLKDGSTDNE
DTTKRKVNLVFEKIQTLKSRAAGSDNKSPDMATQAKALQEQRVALEKEVVELKKQLEEQT
KKQMGLTEAHEKAGAGVKVLQTELERSQEECSRLRDKLAKTEAELRTTLEELFQVKMERE
QYQTEIRDLQDQLSEMHDELDGAKTVVTDGEKDAMMEELMQIKLDLQEVLLAKEEQEEVL
RRRERELTALKGALKEEVATHDQEVDKLREQYEKEIRKLQASVEKAKQSSAAVGKEKAEV
EAAKGAVEGQAGRLSQEAEKLRKRAQELENEVAKLNRIVDDAKLQESKLGDRVGRLEIEK
RQLEESLEEIKEQEEEMSRANRALTTRLEDVQRNLTKLNHDHRELEERLKEERSQKEQFK
NTKNEIEDERSLLDRTVEKLQREMSEIVEASQSSTQELQEQIDVYKEKNRRELAELQRQL
RERGVELDKSRLASKSLQEELSHVEEDLRQCKRERDDSVLKEKALEQKVYDLEVEAETKA
HSKDDKIRQVKLMEDRINQLELDLDEEKQSGDLLIVRIDRGREQVEQMRNELLQERAGRQ
DLECDKMTLERQNKDLKSRIAHQEGSQKSNKEGLVSQLESRIQELEERLEGEERDRANLQ
LVNRRLERKVKEMMMQVDEEHHSLQDQKDQLNLRLKALKRQMDEAEEEIDRLEHGKKKLQ
RDLDEQQEANEQLQSQLKSLRSEMRRKTNSAPLDDDDDEDDISTDGETYFRSSSGYKRSS
SQDNILSTFSL
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtacagagtcaatcaaccggcccgctcttccaggcctcacaatggagctggc
tcctatggcctcagcattagggtccaggggattgatggacacccctacgtggtgctgaac
aaccaggactgtgggtccaactcctatacagatcctaatagtaacggctacaatgacaca
cagggctcctttattgacaactaccatgagtatgacttcaaaggaagcagagaggctgtt
tctgacagcccctttgttgagtacaggtcccagaaacagatgcagtttgggggctctcac
aatggagtcacagagcaggggaagaagccagcatccaccctgctgaacttccagagacac
ccagagatcctcaagccttatgacccagagaacaacaccttgaacctggactgtaaccac
agcctgcctccccggccgatgtccctggcggagactgggagcacctaccagggctcttct
cccagatccacctccccagtagtcgcccatgccgggtcatccagcctggatcataggagg
agtcctgccctgcaggagagaacacagccccagccccagccccagccccagacccagccc
cagcccaagccccagccccagccagccccctctaagcctcaaaccaaacgagtccagtct
caatccaagcctcaagcccagctggctcagccacagtctaagcctcagacccaggtggcc
cagccccagtccaaactcaagcacctgtccaaaccccaaccccagtctctgccacaatcc
aaaccccagtctcctccccagtctcagtctccaccccagtcccagctgccccaacgcgtc
cccataccccagccctatgctgtgtccagacctcccagtgagcagaccaaggcttcctgc
cggtccgccagctccattagcagtgccaactctagtctggagcgcagccgccatgagcca
gacatcctccccctgcgcagagttgactctagcggccccgtgctgcagtcctcgtcccgc
tcccgccactcctctacctcctctaccgaccagttggaggcgctgtacgcagataccatc
aaccgccaccagaaccgacgctacatccccttccaacccggcacgggccgagacatcgac
acaggctccatccccggcgtggacgagctcatcgataagtttgatggtaaggatggtggt
caccagcgacggggcagggcgggccgcaggaacaggatcaatccagaggacaggaagcgc
tctaggagtgtggacagcgccctcccctttagcctccggggagagtcggaatacatggat
gagtttagcaagaaccaggggaggtccacggagcacgtcctccgcccctcacagctgcat
ctgcagaaggtgtctgggagtaaagactcctgggtgacagcggtggaggggaagccaagt
gccaaagcttcggcctgtggtagcagtgctccaggctcccctcagagcatgacctctaaa
gcagcaggctccatccaggggtataaggtggtgctaaatcgctcctctacgttacccctg
gacagtacagatgctgaggatggtcagtcttcaccaaacacaaagattttaacaagtgtg
gctacaacctcactatccaagccttcctctaactttgtcaagaagcctaatgcagagatg
gatgtgcaggtgacacctgatcttttgaaaggtcagcaggagctttcacaacaaacacat
gaagagacggcaaaacagattttgtttaattacctcaaggatgggagcactgataatgag
gacaccactaagaggaaggtcaacctggtgtttgagaagatacagacattaaagtcgcgg
gcagcggggagcgacaacaaatctcctgacatggctacccaagccaaagccctacaggaa
cagagggtagcactagagaaggaagttgttgaactgaaaaagcagctggaggagcaaacc
aagaagcagatgggtctgactgaggcccatgaaaaggccggagcgggggtgaaggtcctg
cagacggagctggagaggagccaggaggaatgctcccgactgagggacaaactggccaaa
acagaggctgagctccgcaccacattggaggagctgttccaggtgaagatggagagggag
cagtaccagacggagatcagggacctgcaggaccagctgtcagagatgcacgacgagctg
gatggcgccaagacggtcgtgaccgacggagagaaggatgccatgatggaggagctgatg
caaattaagctggacttacaggaggtgctgctggccaaggaggagcaggaggaggtgctg
aggaggagggagagggagctgactgccctgaagggagcactgaaggaggaggtggccaca
cacgaccaggaggtggataaactgagggagcagtatgagaaggagatccgcaagctgcag
gcgtctgtggagaaggccaaacagagcagtgctgcagtgggcaaggagaaggctgaagtg
gaggcagccaagggggcagtggagggccaggcgggacgtcttagccaggaggccgagaag
ctgagaaagcgggcacaggagctggagaacgaagtggccaaactcaaccgtatcgttgat
gatgccaagctacaggagagcaagctgggggacagagtcggccggcttgagatagagaag
aggcagctggaagagtctttggaagaaatcaaggagcaggaggaggagatgtcacgtgcc
aaccgtgctctgaccacgcggttagaggatgtacagaggaacttgaccaagctgaaccat
gaccacagagagctggaggagaggctgaaggaggagaggagtcaaaaagaacagttcaag
aacactaagaatgagatagaggacgagaggagtctgctggaccgcacagtggagaaacta
cagagggagatgagtgagatcgtggaggcctctcagtcgtccacccaggagctgcaggag
cagatagacgtgtacaaggagaagaaccgtcgggagctggctgagcttcagaggcagctg
agggaacggggtgtggagctggacaagtctcgtctggcttctaagtccctacaggaggag
ctgagccatgtggaggaagacctgaggcagtgtaagagggagagggatgattcggtgctc
aaggagaaggccctggagcagaaagtctatgacctggaggtggaggcagagaccaaagcc
cactccaaggatgacaaaatccgacaggtcaaactcatggaggacaggatcaatcagctg
gagctggatctggatgaagaaaagcaaagtggagacctgctgattgtcaggatagaccga
ggcagagaacaggtggagcagatgaggaatgaactcctgcaggagagggcaggcagacag
gacctggaatgtgacaagatgactctggagagacagaacaaggacctgaagagtagaata
gcccatcaggagggctcccagaagtctaacaaggagggcctggtgagccagctggagagc
cggatccaggagctggaggagaggctggagggagaggagcgggaccgtgccaacctgcag
ctggtgaaccggaggctggagagaaaggtgaaggagatgatgatgcaagttgatgaagag
caccactcactgcaggatcagaaggaccagctgaacctgcgtctgaaggccctgaagagg
cagatggacgaggcggaggaggagattgaccggctggaacacggcaagaagaagctgcag
agagacctggatgaacagcaggaggccaacgagcagctccagagccagctcaaatccctg
cgcagcgaaatgaggcgtaagaccaactctgctccactggacgacgatgatgatgaggat
gacatcagcacggacggagagacctacttccgctcttcatctggctataaacgctcctct
agccaagacaacatcctgtcaacattctctttgtga
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