Oncorhynchus mykiss (rainbow trout): 110506541
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Entry
110506541 CDS
T07259
Name
(RefSeq) transcription factor 12 isoform X1
KO
K15603
transcription factor 4/12
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110506541
Transcription factors [BR:
omy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
110506541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
CDC45
Motif
Other DBs
NCBI-GeneID:
110506541
NCBI-ProteinID:
XP_021441904
Ensembl:
ENSOMYG00000046858
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All DBs
Position
26:complement(28265840..28362095)
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AA seq
732 aa
AA seq
DB search
MNPQQRIAAIGTDKELSDLLDFSAMFSPPVNSGKNRPTTLGSSQFSAPGMDERPSQASSS
WAPGGQSSSPSYESSRGLADSPHYGDHMSDSRLVSHEGLSQTPFMNSSIMGKSAERAQFP
AYGREPGVSGCQANLRPDIGLVSPGPVTTSGKTAPPFYPPFTGANPRRRPLPEPTPIDPL
QTKKVRKVPPGLPSSVYAPSPNTEDFNRDSPSYSSPKPPSSMFATTFFDGTHNSSDPWNS
SNGINQPSYGGMLGGSSSHMPQSGNYVNMHSHDRQNYPPHSVSPTDIHASLPPMSSFHRS
NASTSPFVNPTHTPPINTTDGVMVAANRGNASGSQQTGDALGKALASIYSPDHTSSSFPS
NPSTPVGSPSPLTCTAGAAASAGTVVTTGAPSGRAGTNQWSRGAAGQSSSSPNYENSLHS
LKTRVHQQLHEHLQDAMSFLKDVCESRMEDRLDRLDDAILVLRNHAVGSTTSLPSDIHSL
LGQNGPIAALGANFPAAGLVASRTAAMGGSHRDEGGSLINSHGGPPSVGSMSNMSSMSTA
ELNHQVETFRGLAAGLAGQVAAALELKVENQDRDDMHDGHSSDDLGSGDESDKRDIKTPR
GGTRTSSINEDDDNLNPEQKAERERERRMANNARERLRVRDINEAFKELGRMVQLHLKSE
KPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSGHGISGDQQAHHGVHP
GLTDTSNPMGRL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctcaacagcggattgccgctatcggaacagacaaggaattgagtgacttactg
gattttagcgcgatgttttctccacccgtaaatagtgggaaaaacaggccaaccaccctt
ggaagcagccagttcagtgcaccaggtatggatgagaggccgagccaggcatcgtcctcc
tgggccccaggtggccagtcgtccagtccctcctacgagtcctccaggggtttggcagac
agccctcattatggtgatcacatgagtgacagtcgattagtgtcccatgaaggattgtcc
cagacaccttttatgaactccagcataatgggtaaatcagcagagagggctcaatttcca
gcctatgggagagagcctggcgtgtctggctgccaggccaatctgcggccggacattggt
ttggtgagtcctgggcctgtgaccacatcggggaaaacggcccctcccttctaccctccc
ttcacaggggccaaccccagaagacgccccctaccggaacctactcccattgatcctcta
caaacaaagaaagttcgcaaggtccctcctggtctgccttcatctgtgtatgccccttct
cccaacacagaagacttcaacagagattctccctcctactcatctcccaaaccccccagc
agtatgtttgcaaccactttctttgatgggacccacaactcttctgatccgtggaattcc
tccaatgggatcaaccagcctagttatggaggaatgctgggaggatcttcatctcacatg
ccgcagtcaggaaattacgtcaacatgcactcacatgaccgccagaattaccctccacac
tctgtgtcgccgacagacatccatgccagtcttcctccaatgtccagcttccaccgcagc
aacgccagcacttcaccattcgttaacccaacacacaccccgcctatcaacaccaccgac
ggggtcatggttgctgcaaatcgggggaacgcctctggaagccagcagactggagatgca
ctgggcaaagccttggcttcgatttactcacctgaccacaccagcagtagttttccatcc
aacccctccacccctgtaggatctccgtcgcccctgacttgcacagcaggtgctgctgcc
tcagcaggtacagtggtgaccaccggcgccccctctggaagggcaggtaccaaccaatgg
tcccgtggtgcagccgggcagagctcctcctcgcccaactatgagaactccctgcactca
ctgaaaactcgagtccatcagcagcttcatgagcatctccaggatgccatgtcattctta
aaggatgtatgcgagtctcggatggaggatcgcctggacagactggatgatgccatcctc
gtcctgcggaaccatgccgtgggctccaccaccagtctgcccagcgacatacacagcctg
ctgggacagaacgggccaatagcagccctcggagcaaacttccctgccgccggattggtt
gctagtcggacagcagcaatgggtggttctcaccgggatgagggtggcagtttgatcaac
agtcacggagggccgcccagcgtgggctccatgtccaacatgtccagcatgtccaccgct
gaactcaaccaccaagtggaaaccttcagaggtctggctgcaggtctggctggtcaggtg
gctgcagccctggagctgaaggtagagaaccaggacagagatgacatgcatgatggccac
tcctccgacgacctcggctccggagacgaaagcgacaagagggacatcaagactcccaga
ggaggcacacggacaagcagcatcaatgaggatgatgacaacctgaacccagagcagaag
gctgagcgggagcgcgagaggaggatggccaacaacgcccgcgaacgcctgagggtgcga
gacatcaacgaggctttcaaggagctgggccgcatggttcagctgcacctgaagagcgag
aagccccagaccaagttgctcatcctgcaccaggccgtggcagtcatactgagcctggag
caacaagtcagagagcggaatctgaaccccaaagcagcctgccttaagaggagggaagag
gagaaggtgtctggccatggtatctctggggaccagcaggcccaccatggggtccacccc
ggcctcaccgacacatccaaccccatgggccgactctga
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