Oncorhynchus mykiss (rainbow trout): 110506574
Help
Entry
110506574 CDS
T07259
Symbol
ahr1a
Name
(RefSeq) aryl hydrocarbon receptor
KO
K09093
aryl hydrocarbon receptor
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110506574 (ahr1a)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110506574 (ahr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
bHLH_HIF1A
PAS_4
bHLH_NPAS4
PAS_9
Motif
Other DBs
NCBI-GeneID:
110506574
NCBI-ProteinID:
XP_036821446
Ensembl:
ENSOMYG00000001067
UniProt:
A0A8K9V5I2
LinkDB
All DBs
Position
3:1960781..1987480
Genome browser
AA seq
935 aa
AA seq
DB search
MYASRKRKKPQRSVKPPPEGAKSNPSKRHRERLNGELDRLASLLPYPQDVISKLDKLTIL
RLCVSYLRAKSFFNVTLQSTASQRPESNVLKKKELHVPEGELLLQVLNGFVLVITAGGTI
FYASSTIQDYLGFHQSDVVHQSVYDVIHMEDRAELQRQLHWALNTPNTGQLVSDSASPQA
VTAYKPEALPPENSTFLERNFVCRLRCLLDNSTGFLALNIQGRLKFLHGQSDRTKEGKAI
PPQLALFALASPLQPPTILEIRTKNFIFKTKHKLDFTPIACDAKGKMVLGYTEAELCNHG
SGYQFIHAADMLHCAENHMRMIKTGESGMTVFRLLTKLTGWVWVQANARLVYKNGRPQCI
IASQRVLTDEEGEDNLRKRSLQLPFSYTTGEALLYNTSFPKTLVTGDSLAGDTTSPAGNI
TNNNQDGTLDPDSLLGSLLKQDKSIYCCSPHTQNELQLPLQLQEEVAGVPQGDCGGIFSS
SWQEGSIRSLSESVLFKQEPLGVGGGGGMDGFSSEDRDRDLWSFMMNLGISREDLELFQQ
DEMFLDVDLDTGRDDLLPDLTDEILSYVQESLRKRSDWGQTVFSCRGAKLGEQDYSCPTT
LLHQPSMEQSQTPHLHSTTVPLHQPSTSRPHSSTVPQCQSQIQPPQLPVVHPLSVHHYRP
PPHYPQQPIPQQCLHTQPHPQATQQQQQSHLNGQVLPNQQQQQLCNRLKHMQVTGTGSIT
QRQNDITKQQQQIPPLFNVEQPGGLQTHHGHPQHGHLCLGEASLGLPYRNQLNTLSVSSS
SVLSSYVPTTGLQSQGVDGDLMPQNFEELLGSLESSGPRGTEDGRGALQWSVVEALGVFQ
QQRHLPDGLAQSQATSQGCAQHAYPLAMGLSQVNRAEWPFTTQFQNGSLKEAGPAPGPVP
NPGSSRGADHGHAAAKQPIHQPPPPSADLPLSGFM
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaagtcgcaagaggaaaaagccccagagaagtgtgaagccacctccagaagga
gccaaatcaaacccttccaagaggcaccgggaacgcctgaatggggagttggacaggctg
gccagtctgcttccttacccccaggatgtcatctccaagctggacaaactgaccatcctc
aggctttgtgtcagctacctgcgtgccaagagcttcttcaatgtgaccctacaatccaca
gcctcccagcgcccagagagtaatgttctgaagaagaaagaacttcacgttccagaggga
gagctcttactacaggtgttgaatggctttgttctggttatcacggctggtggcacaatc
ttctatgcatcctccaccatccaggactacctgggctttcaccagtcagacgtcgtccat
cagagtgtttatgacgtcattcatatggaggaccgagcagagttacagagacagctccac
tgggccctgaacacccctaacaccggacagctggtctcagattcagcctcgccacaggct
gtcacagcctacaagccagaggcactcccaccagagaattccaccttcctggaacgcaac
tttgtctgcaggttaagatgtctcctggacaactccactggcttcctagccctgaacatc
caggggcgtctaaagttcctccatggccagagcgataggacaaaggagggcaaggccatc
ccgcctcagctggctctgttcgccctggcctctcccttacagccccccaccatcctggag
atccgcaccaagaacttcatcttcaagaccaagcacaagctggacttcacccccattgcc
tgcgacgccaaagggaagatggtgctgggttacactgaggctgagctgtgcaaccatggc
tcaggataccagttcatccatgctgctgacatgctgcactgtgctgagaaccacatgagg
atgataaagaccggagagagtgggatgacagtattcaggctgctgaccaagctgacaggc
tgggtgtgggtgcaggctaacgccagactggtctacaagaacggacggcctcagtgtatc
atcgcatcccaaagagtcctcactgatgaagagggagaggacaacctaaggaagcggagc
ctccagctgcctttcagttacaccactggggaggctcttctctacaacaccagcttcccc
aagactctggtaacaggggactccttagcaggcgacaccaccagccctgcaggaaatatc
accaacaacaaccaggatggaaccctggaccctgactcactgctgggctctctgctgaaa
caggacaagtccatctactgctgctcccctcacactcagaacgagctccaactccctctc
caactccaggaggaggtggcaggggttccacagggggattgtgggggcatcttctccagc
agctggcaggagggcagcatccgctctctgtcggagagtgtcctcttcaagcaggagccg
ttgggggtcgggggtggcggggggatggacggcttctcatcggaggacagagacagggat
ttgtggagcttcatgatgaacctgggcatcagtagggaggatctggagctgttccagcag
gatgagatgttccttgatgtggatctggacactggccgagacgacctccttcctgacctg
acagacgagattctctcctacgtacaggagtctctgaggaagaggtcggactggggtcag
actgtattctcttgcaggggggctaagttaggggaacaggactatagctgccctaccacg
ctgttacaccaaccatctatggaacaatcacaaaccccacatctacattctactacagtt
ccgttacaccaaccatcaacctcacgaccacattcttctacagtgcctcagtgtcagtca
cagatacagccaccacagctgcctgtagtccatcccctatcagttcaccactatcggcct
cctccccactacccacagcagccaataccgcagcagtgtttacacacacagccccaccca
caggcaacacagcagcagcaacagagccatctaaatggacaggtattgccaaaccaacag
cagcagcagctgtgtaacagactgaagcacatgcaggtgactgggacgggttcaataaca
caaagacagaacgacatcaccaagcagcagcagcagattcctccattgttcaatgtggag
cagccaggggggctccagactcaccacggccacccccagcatgggcacctctgcctgggg
gaagcttccctgggcctcccctacaggaaccagctgaacactttgtctgttagcagctct
tcagtgctctcctcctatgtacccaccacgggcctccagagccagggggtggacggagac
ctcatgccccagaattttgaggagttgctgggcagcctggagtccagtggtccccgaggg
acagaggatggtaggggagcgctccagtggagtgtggtggaggccctgggtgtgttccag
cagcagaggcacctccctgacggcctggctcagtctcaggccaccagccagggctgcgct
cagcatgcctatcccctggctatggggctcagccaggtcaatagagcagagtggccattc
accacacagttccagaacgggagcctgaaggaggctggtccagcccctggccctgtaccc
aaccctgggtcctccaggggggcagaccatggacatgcagcagcgaagcagccaattcac
cagccccctcctccctctgctgacctccctctgagtggatttatgtga
DBGET
integrated database retrieval system
