Oncorhynchus mykiss (rainbow trout): 110506746
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Entry
110506746 CDS
T07259
Name
(RefSeq) iroquois-class homeodomain protein IRX-5
KO
K24889
iroquois-class homeodomain protein IRX
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110506746
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
110506746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
110506746
NCBI-ProteinID:
XP_021442263
Ensembl:
ENSOMYG00000020260
UniProt:
A0A8C7R066
LinkDB
All DBs
Position
26:37718220..37724879
Genome browser
AA seq
451 aa
AA seq
DB search
MAYPQGYLYQPSPSLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFSSASPG
YNSHLPYSAEAGAAATFASYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNATR
DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEDENIDLEKNDDDEPSKPKDKGDSTDTESDHKLLNPGDIVCDRFKEENHGKET
DPLLSDSELKDQGDRTELLPESAKPTTSSPSAMPRGGTELVAQDKPSEIGHAPGTVNSNV
TSVIHSSPSAPKPKLWSLAEIATSSDRCKSSSDGPQGHGMGHSTVITTNAASPSRSSPQC
PLPNSTVLSRPIYYTSPFYPGYTNYGSFGHLHSHSNHGSGTGSTAHFNGLNQTVLNRAEA
LVRESQKGRGQTQVDLCKDSPYELKKGMSNI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccatccccttctttggcgctgtattcatgc
ccggcgtacagcaccagcgttatatcgggacccaggaccgaagaacttggtagatcctca
tctggctctgcttttgctccctatgccggatctaccgcgttcagcagcgcttcgcccggg
tacaactcccatctgccgtacagtgcggaggcaggagcggccgcgacattcgcttcatac
gtgagttctccctatgaccacacgacgggcatggctgggtctataggatatcacccctac
gctgctcccctgggttcatacccctacggtgacccggcataccgaaaaaacgcgacccgg
gatgctaccgccactctcaaagcctggttgaacgagcaccgtaagaacccctaccccacc
aagggcgagaaaatcatgctggccatcatcaccaaaatgaccctcacccaagtttccacc
tggttcgccaacgccaggaggaggctaaagaaggagaacaagatgacctggactccccga
aaccggagcgaggacgaggaggaagacgagaacatcgatctggaaaagaatgacgacgac
gagcctagcaagccgaaagacaagggagactcgacagacacagagtcagatcataaattg
ctgaacccgggggacatagtgtgcgacagatttaaagaggagaatcatggcaaagaaacg
gatccccttctgagcgactcggaattaaaagaccaaggggataggacagagttactgccc
gagtctgctaaacctaccacctcgtctccatccgccatgcctcggggaggaacggagctc
gttgcgcaagacaagccgtcagaaattggccatgcgccgggcacggtaaacagcaacgtg
acgtctgtcattcactcctccccatcggcccctaaacccaaactctggtccctggctgag
atcgcaacgtcctcagacaggtgtaagagcagcagcgacgggccgcagggccatgggatg
ggtcacagcacagtgatcaccaccaatgcagcgtcaccatcaaggtcctccccacagtgc
cctctcccaaacagcacagtcttatccaggcctatctactacacgtcccctttttacccg
ggctacacgaactatggcagctttggacatcttcacagtcacagcaatcacggctcaggc
acgggctccacggcacatttcaatggattaaaccagactgtgttaaatagagcagaagct
ttggtaagagaaagccagaaaggcagaggccaaacgcaggtagatctttgtaaagactcc
ccttatgaactaaagaaaggtatgtcaaacatttaa
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