KEGG   Oncorhynchus mykiss (rainbow trout): 110506869
Entry
110506869         CDS       T07259                                 
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein MEX3B
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110506869
   04121 Ubiquitin system [BR:omy04121]
    110506869
Enzymes [BR:omy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110506869
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110506869
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110506869
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-C3HC4 RING_XB3-XBAT31 Prok-RING_4 KH_DEAH11_2nd zf-RING_UBOX zf-RING_5
Other DBs
NCBI-GeneID: 110506869
NCBI-ProteinID: XP_021442409
Ensembl: ENSOMYG00000040028
UniProt: A0A8C7TYX4
LinkDB
Position
26:43592888..43597540
AA seq 550 aa
MPSSLFAEMERNGSNQENALDDQRALQLALDQLSLLGLDNDENGLYDNESSRKKSVNMTE
CVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRREDVAMARREII
SAAEHFSMIRASRNKNTSINGTTGGGTPAPGPPNLPGQTTIQVRVPYRVVGLVVGPKGAT
IKRIQQTTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHITMRTGGLIELQDENDFH
ANGTDVGFDIHGHPTLWSKPSNPQSAATTSGRKPFSNYRNDSSSSLGSASTDSYFGTNSG
SRMADYSPPSPALSYTASNGNNNNNNLNINTNGNGFVYGGDVISPDCTDMTFSDTSPGFN
PTPAPPGLLWSQYERGMTPSSSSSSSPTSTSSAIYPSANASTNANGMATSQRRMNGGCTP
QPRLSPPLQNNHAGGPTDHPLARRVRSDPGGGPRCFHGYPSSNGMASLPGPHLPGVPCDS
SASSSSSSSSTSRKGSRDCSLCFESEVIAALVPCGHNLFCMECANRICQRSEPKCPVCHT
GVTQAIRIFS
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgcctagctcactgttcgcggagatggagaggaatgggagcaaccaggagaacgccctg
gacgaccagagagccctgcagttagccctggaccagctctccttgctcggcttggacaac
gacgagaacgggctatatgacaacgagtctagccggaaaaagagtgtcaatatgaccgaa
tgtgtccctgtgcctagttcggagcatgtagctgaaatcgtcggcagacaaggatgcaaa
atcaaagccctacgagccaagaccaacacctacatcaagacgcccgtgcgtggcgaggag
ccggtgttcgtggtgaccgggaggagggaagatgtcgctatggcaaggagagagatcatc
tctgcggctgagcacttctccatgatccgggcctcccggaacaagaacacaagcatcaat
gggacaacgggaggtggtaccccggcccctggaccccccaacctaccaggccagaccacc
atccaagtccgggttccttacagggttgttgggctggtcgtgggtcccaagggggccacc
atcaagcgcatccagcagacaacccacacctacatcgtgactcccagccgggacaaggag
cccgtgttcgaggtgacgggcatgcctgagaacgtggaccgtgctcgggaggagatcgag
gcccacatcaccatgcggactggtggcctcattgagctccaggacgagaacgacttccat
gccaatggcacggacgttgggtttgacattcatggccaccccaccctatggtccaagccc
agtaacccgcagagcgctgccaccacgtcgggacgcaaacctttctccaactaccgcaac
gactcatcatcctccctgggcagcgcgtccacagactcctacttcggcaccaacagcggc
tcgcgcatggcggactacagccccccctccccggcgctcagctacaccgccagcaacggc
aacaacaacaacaacaacctgaacatcaacaccaacgggaatggctttgtctatggtggt
gacgtcatctcgcccgactgcactgacatgaccttcagcgacacctcgcctgggttcaac
cccacgccggccccgcccggcctcctctggtcccagtacgagcgggggatgactccctcc
tcctcatcctccagctcccctacctccacctcctctgccatctacccatcagccaatgct
tccacgaacgccaacgggatggcgacgagccagaggaggatgaacggtggctgtaccccc
cagccccgcctgtctccgcccctccaaaacaaccacgccggaggacccaccgatcacccc
ctggcccggagagtccgcagcgacccaggaggaggcccccggtgcttccacgggtacccc
agctccaatggcatggcctctctgcccgggccccacctccccggggtgccctgcgactcc
tcagcctcctcttcatcctcttcctcctccaccagccgaaagggcagccgcgactgctcc
ttgtgctttgagagcgaggtaattgcagctctggtgccctgtggccacaacctgttctgt
atggagtgtgccaaccgcatctgccagaggagtgagcccaaatgccccgtgtgccacaca
ggggtcactcaggccatacgtatattttcataa

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