Oncorhynchus mykiss (rainbow trout): 110506903
Help
Entry
110506903 CDS
T07259
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 17 isoform X1
KO
K08631
a disintegrin and metalloproteinase with thrombospondin motifs 17 [EC:3.4.24.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110506903
Peptidases and inhibitors [BR:
omy01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
110506903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_C
TSP_1
ADAMTS_CR_2
Reprolysin
ADAMTS_spacer1
TSP1_spondin
Pep_M12B_propep
Reprolysin_5
TSP1_CCN
Reprolysin_3
Adt-1
ADAMTS_CR_3
Reprolysin_2
Reprolysin_4
Peptidase_M10
Peptidase_M66
DUF3810
PLAC
Motif
Other DBs
NCBI-GeneID:
110506903
NCBI-ProteinID:
XP_036820375
LinkDB
All DBs
Position
26:complement(44705368..44923032)
Genome browser
AA seq
1156 aa
AA seq
DB search
MYDSHAPQLLLSIFLFCFGVKAMTDHSCYDTDLVDMVVPVELSGEEAHLLHDSSRRSARR
RGQRSVDSRGGLNSVEDTLFFSLPAFGKDLYLRLKRDAAFLSEGFVVEERGGETDPPKWS
HLARDQLCFYSGWIVNHTDSFASLNTCSGLTGLVYTGEDSLFIQPVNSSSDSFSGLQHRV
VRHRRSAKTSPPSAPPPGFTAADKQPKDCGTIPVRKKRQKGVEEGRRRRNTIHLNGLYTV
ETVVVADSDMVQYHGAEAAQRFLLTVMNMVYNMFNSKSLGVRINIRVTKLVLLHNRPDKL
KVGHHGERALESFCQWQWEEYGGPRYLGNNYVPGGRDDIPPVDTAVLVTRTDFCVHKDQP
CDTVGIAYLGGACSSKRKCVLAEDNGLNLAFTIAHELGHNMGMSHDDDHATCTGHSHIMS
GEWVKGRNPSDLSWSPCSRDDLEKFLRSKASSCLLHTDPRSRYKVRLPPKLPGMHYSADE
QCQILFGTNATFCNDMEVHTHHLMCAGLWCLVEGDKSCKTKLDPPLDGTECGADKWCRAG
ECVSKSPIPQHVDGDWSIWSQWSQCSRTCGTGAQFRQRKCDNPPPGPGGSNCQKASVEHK
VCEGPPCPKGTPSFRELQCLSHDRQAGKKKNSIWTAVNNDEKPCALFCSPVGRDAPILVA
ERVMDGTPCGPYESDLCVNGRCQKIGCDGIIGSSAKEDRCGVCNGDGHSCKIVKGDFNHT
KGRVSSSHCKRVSTCVMAKPRAVPKCFSCYIEAAVIPVGARRIKVVEDKPSHSFLAMKDS
TKRSINSDWKIELPGEFQLAGTTVRYVRRGLWEKMSAKGPTKTPLYLMVLLFHDQTYGIH
YEYTVSLNVTERDDVSEEQRAPEHLYLWTHSSWQDCNVQCGGGERRTVVSCMRLVNKSMT
LVNDSLCQPENRPLPQVRRCNSHPCQYRWVTGEWGQCSVTCGKGLQLREVGCVYQLQNGS
LIHTRDLYCQGGKPPALQGCEGRHCLTAWEASEWSKCSSDCGSGVRRRTVRCTNPQGNCD
PLSQPADQEPCEDHSKCYEWKTGDWSKCSSSCGKGLQSRVVQCMHRVTGRHGNDCPVVFR
PPTYRPCHQEACNDKVNVNTITSPRLAALTYKCTGDQWTVYCRVIREKNLCQDMRWYQRC
CDTCRDFYANKTPRKS
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacagccatgctccgcagcttctcctgtctatattcctcttctgtttcggagtg
aaggcgatgactgatcactcctgttatgacacggacttggtggacatggtggtccccgtg
gagctctctggagaggaggctcacctgttgcatgactcatccaggcgcagcgcgcgtcgg
cgcggccagcgctctgtcgattcccggggtggactaaactctgtggaggacaccttattt
ttctctttacctgcttttggaaaagacctgtacttacgcctgaaaagggatgccgctttt
ctgtctgaggggtttgtggtcgaggagaggggaggcgaaacagacccccctaaatggtcg
cacctggccagagaccagctctgcttctactcgggatggattgtcaaccacaccgactct
tttgcctccctcaacacctgcagcggtctgactggactggtctatacaggagaggacagt
ctcttcatccagccggtcaacagttcttccgactccttttccgggctgcagcacagggtg
gtccgacaccgccgctcagccaagaccagccctccttctgcccctccccctggattcaca
gctgcagacaagcagcccaaggactgcggcaccattccagtgagaaagaagaggcagaag
ggagtggaggagggccgtagaaggagaaacaccatccatctgaatgggttgtatacggta
gagacggtggtggtggcagactcagacatggtgcagtaccacggggcagaggccgcgcag
agattcctgctcaccgtcatgaacatggtgtacaacatgtttaacagcaagagtctgggc
gtcagaatcaacatacgggtcaccaagctggtcctgctccacaaccgcccagacaagctg
aaagtgggccaccacggagaaagggccctggagagcttctgtcagtggcagtgggaggag
tacggcggcccccgttacttaggcaacaattacgtgcccgggggcagggatgacatccca
cctgtggacacggccgtgctcgtcactaggactgacttctgcgtgcacaaagaccagccc
tgtgacacagtgggtattgcctatctgggaggggcatgcagctccaagaggaagtgtgtt
ctggccgaggacaacggactcaacctggccttcaccatagcccacgagctgggacacaac
atggggatgagccacgatgacgaccatgctacctgtacaggccactcccacatcatgtct
ggcgaatgggtgaagggccgtaaccccagcgacctgtcatggtccccctgcagccgtgac
gacctggagaagttcctcaggtccaaagccagcagctgtctgctccacacagaccccaga
agccgctacaaggtccgcctgccacccaagctgccaggcatgcactacagtgcagacgaa
cagtgtcagatcctctttggaaccaacgccaccttctgcaatgacatggaggtacacaca
catcacctgatgtgcgcgggcctgtggtgtttggtggaaggagacaagtcctgtaagacc
aagctggaccctcctctggacggcacagagtgtggagctgacaagtggtgccgggcaggg
gagtgtgtaagtaaaagccctatcccacagcatgtggatggggactggagcatctggagt
cagtggagccagtgcagtagaacctgtggcaccggagcccagttcagacagaggaaatgt
gacaacccgccgccaggtcctggtggtagtaactgtcagaaggccagtgtggaacataaa
gtgtgtgaaggtcctccctgccctaaaggaacacccagcttcagagagctgcagtgtctc
tcccatgaccgccaggccggcaagaagaagaacagcatatggaccgcagtcaataacgat
gagaagccatgtgccctgttctgttcccctgtggggagagatgcccccatcctggtggca
gagagagtgatggatggaacaccatgtggaccctacgagtcagacctgtgtgtcaatggc
aggtgtcagaaaatcggctgcgatggcatcatcggctcgtcagccaaggaggaccgctgt
ggggtgtgtaacggagacggacactcctgtaagattgtcaagggagacttcaaccacacc
aagggcagggtctcctctagccactgtaagagggtttctacctgtgtgatggctaaacca
agggctgtccccaagtgtttctcatgttacatcgaggctgctgtcatccccgttggtgct
aggagaatcaaagttgtggaggacaagccctcacacagctttctggcaatgaaagactct
accaagaggtccatcaacagcgactggaagattgagcttcctggagagttccagctggcc
ggcactacagtgcgctacgtccggagaggactctgggagaaaatgtccgccaagggaccc
accaagaccccgctgtacctcatggtgctgttgttccatgaccagacctatgggatacac
tatgagtacacagtgtctctgaacgtaactgaacgtgatgatgtcagtgaggagcagaga
gcaccagagcacctctacctttggacacacagctcctggcaagactgcaacgtacagtgt
ggaggaggtgagaggaggacagtggtgtcctgtatgaggctggtcaataaaagcatgact
ctggtgaatgacagcctctgccaaccagagaacaggccgttaccccaagtacgacgctgc
aactcacacccctgccagtacaggtgggtgacaggggagtggggccagtgttcggtgacg
tgtgggaagggtctccagctgcgtgaggtgggctgtgtgtaccagctgcagaacggatcc
cttatccacacacgggacttgtactgccaggggggcaaaccccccgccctgcagggctgc
gagggacgccactgcctcactgcctgggaggcctctgagtggtccaagtgttcttcagac
tgtggcagtggggtccgtcggaggacagtgaggtgcaccaacccccaggggaactgtgac
cccctctctcagcctgctgaccaggagccctgtgaggaccactccaaatgttacgagtgg
aagactggggactggtccaagtgctcatcatcctgtgggaagggcctgcagtccagagtg
gtccaatgtatgcacagagtgacaggtcgccacggtaatgactgccccgtggtgttcaga
ccacccacctaccggccctgtcaccaggaggcctgcaatgacaaagtcaacgtcaacacc
atcacctcccccagattagctgctctgacctacaagtgcacaggagaccagtggactgtg
tactgccgtgtgatccgagagaagaacctgtgccaggacatgagatggtaccagcgctgc
tgcgacacctgcagagacttctacgccaacaaaacaccccgcaagagttaa
DBGET
integrated database retrieval system
