Oncorhynchus mykiss (rainbow trout): 110506956
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Entry
110506956 CDS
T07259
Name
(RefSeq) Bardet-Biedl syndrome 4 protein-like isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110506956
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110506956
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
110506956
Cilium and associated proteins [BR:
omy03037
]
Primary cilia and associated proteins
BBSome
110506956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_11
TPR_19
TPR_14
ANAPC3
TPR_12
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_7
TPR_15
TPR_Slam
ARM_TT21_2nd
ARM_TT21_N
ARM_TT21_4th
NatA_aux_su
TPR_10
PknG_TPR
Wzy_C_2
TPR_20
HrpB1_HrpK
ARM_TT21_C
TPR_MalT
Clathrin
Motif
Other DBs
NCBI-GeneID:
110506956
NCBI-ProteinID:
XP_036819499
Ensembl:
ENSOMYG00000036846
LinkDB
All DBs
Position
26:complement(47100651..47118376)
Genome browser
AA seq
553 aa
AA seq
DB search
MATASCAVKMADEENTLTLPVASETKKRQAPKAPELPILERRNWLIHLHYIRKDYETCKA
MIKEQLQETQGMCEYAIYVQALILRLEGQIQPSLELFQSCAILNPTSPDNLKQVARSLFL
LGKHKAAIEVYQEAGKLNEKDWEIKHNLGVCYSFIKDFQNSEEQLNAALQLKKHDRTFMT
LGKVHLLAGDTDKAIEVYKSAVEFSPENAELLTTLGLLYLQLGKYQKAFEHLGNALTYDP
NNYKAILAAGSMMQTHGDFDVAMNKYRVAACMVPESPPLWNNIGMCFFGKKKYVAAISCL
KRAHYLSPFDWKVLYNLGLVHLTMQQYASAFHFLSAATNLQPHLGELYMLLAVALTNLED
VDNARRSYEQAAALDQSNPLVNLNFAILLYNHGDKKGALQQYQEMERKVNILKDSNTEFD
PELMDMAQKMAAALQVGESLEWTKPVKDPKSKQRSAGAPSKTPGSSQQPLGTNQALEQAM
SSAAGYNKSITLPTGVSPHSQPTPPSLALEEEPDVETTPTRAPQPEESDPSTTMPPLAAK
PKVKKNKLKQELN
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcctcctgcgctgtcaagatggcggacgaagaaaacacactaactctcccg
gtggcctctgagacgaagaaacggcaagctccaaaagctccggaacttcccattctggag
aggaggaactggctcatccacctgcactacatccgcaaagactatgagacctgcaaggca
atgatcaaagagcagctacaggagacccagggaatgtgtgaatatgccatatacgtacaa
gcgctaatcttgcgtctggaggggcagatccagccatccctggagctgttccagagttgt
gccatcctcaatcccaccagccccgacaacctcaaacaagtggcccgatcgctttttctg
ttggggaaacacaaggcagccattgaggtttatcaggaagctgggaagctcaatgagaaa
gactgggagatcaaacataatctgggtgtatgctattccttcataaaagacttccaaaat
tctgaagagcagttgaatgcagccctgcagttgaaaaaacacgacaggacattcatgaca
ctgggaaaggtccacttgttggcgggagacacggacaaagccatcgaagtgtacaagagt
gcagtggagttctctccagagaatgccgagttgctgaccactctggggctcctgtatctg
cagttgggaaaataccaaaaagcatttgaacatctcgggaatgcacttacttatgaccct
aataactataaggccatcctggcagcaggcagtatgatgcagacccatggggactttgat
gtggccatgaacaagtaccgcgtggcagcgtgcatggtccccgagagccccccgctctgg
aacaacatcggcatgtgcttctttggcaagaagaaatatgtagcagccatcagctgcttg
aagcgggcccactacctgtctccgtttgactggaaggtactgtacaacctgggcctggtg
cacctcaccatgcagcagtatgcctctgccttccacttcctcagcgctgccaccaacctg
cagccccacctgggagaactctacatgctactagcagttgcactgaccaatctggaggac
gtggacaatgccaggagatcctatgaacaagctgcggctttagaccagtccaaccctctg
gtcaacctgaactttgccattctgctgtacaaccacggggacaagaagggagccctgcaa
cagtaccaggagatggaaaggaaagtcaacatactgaaggacagcaacactgagtttgac
cctgagctaatggacatggctcagaagatggccgctgccttgcaggtgggagagagcctg
gagtggaccaagccggtcaaagaccccaagtctaagcagcgctcggctggggcccccagt
aaaacccctggcagctcccagcagcccctaggcaccaaccaggccctggagcaggccatg
tcctccgccgcaggctacaacaagagcatcacactccccacaggagtgtccccccacagc
cagcccacgcccccctccctggccttggaggaggagcctgatgtggagaccacccccacc
cgagcccctcagccagaagagtcagacccctccaccaccatgccccctctggcagccaaa
cccaaagtcaagaagaacaagttgaagcaagagctgaactag
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