Oncorhynchus mykiss (rainbow trout): 110507000
Help
Entry
110507000 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase arih1 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110507000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110507000
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
110507000
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
110507000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_14
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
110507000
NCBI-ProteinID:
XP_036837457
LinkDB
All DBs
Position
6:complement(92687123..92710683)
Genome browser
AA seq
526 aa
AA seq
DB search
MDSDEGYNYEFDEEEEECSEDSAEEDPEDDTLEVELDDPVVAGGERDECGETGGSGLGPG
QDEEDYRFEVLTAEQILQHMVECIREVNDVIQNPATITRILLSHFNWDKEKLMERYFDGN
LDKLFSECHVINPSKKSRTRLMNTRSSAQDLPCQICYLNYPNSYFTGLECGHKFCMQCWG
DYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITESKVKLKYQHLITNSFVECNRLL
KWCPAPDCHHVVKVQYPDAKPVRCTCGRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSET
SNWIAANTRECPKCHVTIEKDGGCNHMVCRNQSCKAEFCWVCLGPWEPHGSAWYNCNRYN
EDDAKAARDAQEVTRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAGVKAKMEEMQHHNMS
WIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENATEVLSGYLER
DISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggactcagacgaagggtacaattatgaattcgacgaggaggaagaggaatgcagcgaa
gacagcgccgaggaggatcccgaagacgacaccctggaagtggagttggatgatcctgtt
gtggccggtggagaacgagatgaatgtggggagaccggaggcagtggcctagggcccggt
caagacgaagaggattatcggttcgaggttttgactgctgaacagatccttcagcatatg
gtcgagtgtatcagggaggtcaatgatgtcatccagaaccctgcaacgataacaagaata
cttcttagtcacttcaattgggacaaagagaaactgatggaaagatattttgatgggaac
cttgacaaattgttctcggaatgccatgtcatcaaccccagtaagaagtcgaggacacgg
ctgatgaacacgaggtcctctgctcaggatcttccctgtcagatctgctacctgaactac
ccaaactcgtacttcactggcctggagtgtggacacaagttctgcatgcagtgttggggt
gactacttgactaccaaaatcattgaggaggggatgggacagacaatttcctgcccggct
cacagctgtgatatattggtggacgacaacacagtcatgagactgatcacagagtccaag
gtgaagttgaagtaccaacacttgattaccaatagttttgtagagtgcaatcggctgtta
aaatggtgcccggcgccagactgtcatcacgtagtcaaagtccagtacccagatgctaag
cctgtgagatgcacatgtggccggcagttctgcttcaattgtggcgagaactggcatgat
cccgtcaagtgtaagtggttgaggaaatggatcaagaagtgtgacgatgacagcgagacg
tctaactggatcgcagccaatacaagggagtgccccaaatgccacgtgaccattgagaag
gacggcggctgcaaccacatggtgtgtcggaaccagagctgcaaggcagagttctgctgg
gtctgcctggggccctgggaaccacacggctctgcctggtacaactgcaaccgctacaat
gaggatgatgccaaggcagcgagggacgcccaagaggtaacacggtccagggcagccctg
cagaggtacctgttctactgcaaccgttacatgaaccacatgcagtcgctgcgcttcgag
cacaagctgtacgccggggtcaaggccaagatggaggagatgcagcatcacaacatgtcc
tggatcgaggtgcagttcctgaagaaggccgtggacgtgctgtgtcagtgtcgctccaca
ctcatgttcacctacgtcttcgccttctacctcaagaagaacaaccagtccatcatcttt
gagaacaatcaggctgacttggagaacgctacggaggttctgtctggatatctggagcgg
gacatctcccaggactctctgcaggacatcaaacagaaagtacaggacaagtacagatac
tgtgagagtcggcgtcgggtgctgctgcaacatgtgcacgagggctatgagaaggacctc
tgggaatacatagaagattaa
DBGET
integrated database retrieval system
