Oncorhynchus mykiss (rainbow trout): 110507062
Help
Entry
110507062 CDS
T07259
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04517
IgSF CAM signaling
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110507062
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110507062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110507062
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110507062
Intermediate filaments
Intermediate filament-binding proteins
110507062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
TMP_3
Motif
Other DBs
NCBI-GeneID:
110507062
NCBI-ProteinID:
XP_036820866
Ensembl:
ENSOMYG00000024092
LinkDB
All DBs
Position
27:complement(9057091..9122143)
Genome browser
AA seq
2743 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNTRLASSSGHWETEVTSSKLFECSRIKALAEERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQGIKIECDDNRETRSAKDAL
LLWCQMKTAGYSEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLIRSNATHNLQQAFN
IAEQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALRVEGKRVGKVLDSAID
GQKMIDRYEALASELLEWIEKTIGIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRQELIRQEK
LELLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIG
VVVELAGEMETEGYYDIRRISARKENILGQWSLLKELVVGRKARLEKNLALQKTFQDMVY
MIDWMEDMQVQLLSKDFGKHLLEVDDLLQKHSLQEADITVQAERVQTLNTAALKFTTIEG
YQPCDPQVICNRVNHVSTCLEELKQLAAKRHSELEESQHLWAFFQEVEESEAWIREKSSI
LAAQTCGKDLSSVLRLLQKHKTLAGELLAHRSLLQQTMKKGKQILMEKSFGTGGIQERIM
EVKGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLLAWLQDAYRLVSSEDFGHDEYSTQ
SLLKKHRGVREAVDKHRLHVVTLRKHMVALPLHYRELDEVQSRMGEAEQLYTEVAEVAVL
RQQWLHDALAVYLMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVIAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSGHPSSTEVRGCQDHLNSRWNRIVEMVEQKKDHLDSVLRLQNY
LLECAEIKSQIQEKRKAIDATQYVGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQQEAE
ELAISHPAKAMEVLEPFEGISVEWEELKRTLQGCEDSLMVAGRLQQFIQDLDSFLTWLVQ
TQTAAASDELPNALEEAERLINRHAALKEEIGRYEEDYERLQAVNELLEAEEAPLPYAAL
QQWLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHVELPAT
VETVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIRERVDTLANRGNQN
RELAQQWLERLNGQWGLQRLLQDCHELGDWVAEKMLMARDTSRDETQKLHKKWLKHQAFM
AELAQNKEWLEKIEREGQQLIQEKPELGPVVRRKLGEIHECWQDLESTTQAKARQLFEAN
RADLLVQSYTSLDHQLHQLEGQLGYVDQGQDLTSVNKQLKKLQTMECQMEEWYKEVGELQ
VAAASVPQQGQVMDTVSERQSAVETRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILW
VQERLPAATSQEHGSSLQAVQQLMKKNQTLQRELQGHRARVEDVLERANVIASIRSPQAD
CVRAGLEQLSRLWGLLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKG
KDEPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDSEQISKRQCQMDRLYV
SLKDLVEERKSRLEQQYWLYQLNREVDELEQWIAEREVVASSPELGQDFEHVTILQEKFT
EFASETGSLGQERVTAVNQMVDELIDYGHADAATIAEWKDGVNEAWADLLELMETRAQML
AASHQLHKFFTDCREVLAQIDDKQRRLPEVRARQGGTANTSTLQRLMQSFEHDIQLLVTQ
VRQLQESAGQLRTIYAGQKAEAIAGREQEVMHCWKELLTSCEECRVQITTATDKLRFFGV
VRDQIMWMDSIISQIGTGDNPSIPSSDITGSGLSGPFRDVSSVEVLMNYHQSLKSEVEAR
SKSVLQCIEMGKTLLAARNPAAEEIKEKLDTVVAKQYELSEKWDKHWEVLQHMLEVHQFA
QEAVVAEAWLTAQEPFINSKELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVE
KMKAEQSKLPPTPLLGRKVFLDPQETSPARSQGSPLMRRILYEQAEPRAERPPQEPSPSS
VARRLGSTVANYTPIMNGSSGYRSSLEARAMPMMGGLAGGVVGVAARLGTAAVEATHLGT
TAAMEVRGVAAGFGTAASEARGLAAGLVTPAVEAKGIAASLVTGAAAAVEVKASQYLRQP
KIKHMDDMVTPMLVACRLEKAREKEVREREQRERERDIVLMEPAPVMPVMAEVVLQEMGR
EGMGRERLNSEPSSRDHRAGSSRSEPQQRDRDRDSRDSRDSHREARLERQHSSEALMIQA
RRDELPQEVWRERAERKERKLERQTSSEQEGHGHEGRRKDRHRTERQESSEHDTAKEQSD
RRSTEKRSGGQTLFDIVEQLKEREAATARGEVPKVPNGVPEKSSGRPDRPRARDRPKPRR
RPRPKDPSAGEATTRRSRSAPEPGVAQGVSPSVPQAPSHTAHHEGFLFRKLDIETMRKSS
NSRSWVNLYCVLNKGEIGFYKDAKNTATPYNNEPMLNLGHCHCDVTLGYKKKKNVFTLKT
KDGSEFLFHAKDESQDDLKAWTTNINKSIAEHEEIAKWGQPQPTTSSTDEGTRRDGSKAD
NKSERGEKSDRGERPQRAERSERSDKGETKSDTKRSEKSSKKK
NT seq
8232 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccacagatctggacaacgcggaggcccagcgccagctcaacaacaac
aacacccgtctggccagcagctcgggacactgggaaaccgaggtcaccagctccaaactg
tttgagtgttcccgcatcaaggccttggcagaagagagagatgctgtccagaagaagacc
ttcactaagtgggtgaactcccacctggccagagtgtcctgtcggattgctgacctctac
aacgacctccgggacggctacatgctcaccaggctgctggaggtcctgtctggggagatg
ctgccgaggcccacgcggggtcgcatgcggatccactgcctggagaacgtggacaaagcc
ctgcagttcctcaaggagcagagggtccacctggagaacgtcggctctcacgacatcgtc
gacggcaaccaccgcctcacccttggcctcatctggaccatcatccttcgcttccagatc
caggggattaagatcgagtgtgacgacaacagggagactcggtcggcaaaggatgcccta
ctactctggtgccagatgaaaaccgctgggtactctgaggtcaacatccagaacttcacc
acgtgctggagagatggtctcgccttcaacgctctcattcaccgacacaggcctgatttg
attgagttccataagctgatccggtccaatgccacacacaacctccagcaagccttcaac
attgctgagcagaacctggggctcaccaaactcctggaccctgaagacgtgaatacggag
aacccagatgagaagtcgataataacctatgttgtgtcctactaccattacttctccaag
atgaaagcccttcgagtagagggcaagagagtgggaaaggtcttggacagtgccattgac
ggtcagaagatgatcgatcgatatgaggctctggcctcagagctcctggagtggatcgag
aagaccataggcatcatcagcaaccagaagtttgccaactccttaacgggtgtccagcaa
cagcttcaagccttcaccacctactgcaccatcgaaaagcccatcaagttccaggagaag
gggaacctggaggtgctcctctttactatccaaagcaagctcagagctaacaaccagaaa
ccatacgtgccccatgaagggaaactcatctctgatatcaataaggcgtgggagaggctg
gagaaggcggagcacgagagaggcgtggcactacggcaggagctgattcgccaggagaag
ctggagttgctggcccagcggtttgaccacaagaccaccatgagacaggcgtggctcaac
gagaaccaacgcctcgtgtctcaggataactttggctacgacctgcctgcggtggaagcc
gccatgaagaagcacgaggccattgaggcggacatctcgtcgtacgaggagcgcatcggg
gtggtggtggagctggctggggagatggagacggagggctactacgacatccggcgcatc
tcggcccgaaaggagaacatcctgggccagtggagcctgctgaaggagctggtggtgggg
aggaaggcccggctggagaagaacctggccctgcagaagaccttccaggacatggtctac
atgatcgactggatggaggacatgcaggtccagctcctttccaaagacttcggcaagcat
ctgctggaggtggatgacctgctgcagaaacacagcctccaggaagctgacatcacagtg
caggcagagagggtgcagacccttaacacagccgctttaaaattcaccaccatcgaaggc
taccagccctgtgacccccaggtgatctgcaaccgggtcaaccatgtcagcacctgcctg
gaggagctcaagcagctggcagccaagcggcactcggagctggaggagtctcagcacctt
tgggccttcttccaggaggtggaggagtctgaggcctggatccgcgagaagagctccatc
ctggccgcccagacctgcggcaaggacctgagcagcgtgctgcggctgctccagaaacac
aagaccctggctggggagctgctggcccaccgctccctcctccaacagaccatgaagaag
ggcaagcagatcctgatggagaagagttttggcacggggggcatccaggagcgcatcatg
gaggtgaaaggggagtggaagaggctggaggaccaggcggcgcagagactgggccacctg
caggaggcactcaacttcttccagttcagcacagagacggacgacttgttggcatggctg
caggacgcctaccgtctagtgtccagcgaggactttggccatgacgagtactccacccag
tcactgctcaagaagcaccggggcgtgcgcgaggccgtggacaagcaccggctgcatgta
gtaactctgcgcaaacacatggtggcgctgccactgcactaccgggagctggacgaggtg
cagtcaagaatgggcgaggcggagcagctgtacaccgaggtggccgaggtggccgtcctg
aggcagcagtggctgcacgacgcgctggccgtctacctcatgttcagcgaggtcaacgcc
tgcgaggtgtggatcgacgagaaggagcagtggctcaacaagatggaggttccagagagg
ctggaggacgtggaggtcatagcccataggtttgagagcctggaccaggagatgaacagc
ctgatgggaaggatcttggacgtgaaccagatagtgcagcagctcctggacagtggtcac
cccagctctacagaggtcagaggctgtcaggaccacctcaacagcagatggaaccgcatc
gtggagatggtggagcagaagaaggaccacctggactctgtcctccgtctccagaactac
ctgctggagtgtgctgagatcaagtcccagatccaggagaagcgcaaggccatcgacgcc
actcagtacgtggggagtgacctgggcggggtgctggccctgcagcgccgactctccacc
atggagggggccctagccgtgctggagcccaagctgcttcacctgcagcaggaggcagag
gaactggccatctcgcacccggccaaggccatggaggtcctggagcccttcgagggcatc
agtgtagagtgggaggagctgaagcgcacgctgcagggctgcgaggactctctgatggtg
gcggggcggctgcagcagttcatccaggacctggactccttcctgacgtggctggtgcag
acgcagacggcggcagctagcgacgagctgcccaacgcgctggaggaggccgagaggctg
atcaaccgccacgcggcgctgaaggaggagatcgggaggtacgaggaggactacgagcgg
ctgcaggcggtcaacgagctgctggaggccgaggaggcgccgctgccatacgcggcgctg
cagcagtggctccagaagctggatgtgggctggaacaagctgctagagatgtgggagagc
cggagggaggtgctggtgcaggcgcacatcttccacctcttcctgagggacgtcaagcag
gcagaggccttcctcaacaaccaggagtcagccttggcccacgttgagctccccgccacg
gtggagacggtggaggctgccatcaagaagcacaaggactttaccaccaccatggagctc
aacctgcatcgcatcaaggctgtcatcgaggccggagagagcctcataagccagagcaac
atctactcggaccgtatcagggagcgtgtggacaccctcgctaacagaggcaaccagaac
cgggagctggcccaacagtggctggagaggctcaacggccagtgggggctccagagatta
ctacaggactgccacgagcttggagactgggtggcagagaagatgctcatggctcgtgac
acgtcccgcgatgagacgcagaagctgcacaagaagtggctgaagcaccaggctttcatg
gccgagctggcccagaacaaggagtggctggagaagatcgagagggagggccagcagttg
atccaggagaagcccgagctgggcccggtggtgcggaggaagctgggggagatccacgag
tgttggcaggacctggagagcaccacccaggccaaggcccgccagctgtttgaagccaac
cgggctgacctgctggtgcagagctacaccagcctggaccatcagctgcaccagctggag
ggacaactgggctacgtggaccagggtcaggacctgaccagcgtcaacaagcagctcaag
aagctccagacgatggagtgtcagatggaggagtggtataaggaggtgggggagctgcag
gtggcggcggcctctgtcccccagcagggccaggtcatggacacggtcagcgagcgccag
tccgccgtggagacgcgcatcgtccgcctcatcgagccgctcaaggagcgccggcgcatc
cttctggcctccaaggaggttcaccaagtgggccgggacctggaggacgagatactgtgg
gtgcaggagcggctgcctgccgccacgtctcaggagcacggctccagcctacaggctgtg
cagcagctcatgaagaagaaccagactctgcagagggagctacagggccatcgggcgagg
gtggaggacgtcctggaaagagctaatgtcatcgcctccatccgcagcccccaggctgac
tgtgtgcgggcgggcctggagcagctcagcaggctgtggggtctgctgtgggccgagacg
gagagaagacagctggtgctggatgccatgtaccaggcccagcagtactactttgacacg
gccgaggtggaggcctggctcagcgaacaggagctgcacatgatgaacgaggaaaaggga
aaggatgagcctagcaccctgcagctactgaagaagcacctggtactggagcagacgata
gaggactacgctgagacgataggccttctctcccagcagtgcaggcagctactggagatg
ggacatccagacagtgagcagatcagtaagcgtcagtgtcagatggaccggctgtacgtg
tctctgaaggacctggtggaggagagaaagtctcgtctggagcagcagtactggctctac
cagctcaaccgcgaggtggacgagctggagcagtggatcgctgagagggaggtggtggcc
agctcgccagaactgggacaggactttgaacacgtcacgatcctgcaggagaagttcaca
gagtttgcgtcggagacgggcagtctgggtcaggagcgtgtgacggcggttaaccagatg
gtggacgagctgatcgactacggccacgccgacgccgccaccatcgccgagtggaaggac
ggcgtgaacgaggcctgggccgacctcctggagctcatggagacccgggcacagatgctg
gccgcctcgcaccagcttcacaagttcttcaccgactgccgcgaggtcttggcccaaatc
gatgataagcagcggaggttgcccgaggtgcgggcgcgccagggtggcacagccaacacc
agcaccctgcagaggctcatgcagagcttcgagcacgacatccagctgctcgtcactcag
gtgaggcagctccaggagagtgcgggtcagctccggaccatctacgccgggcagaaggct
gaggccatcgccggccgggaacaggaagtgatgcattgctggaaggagctcttgacttcc
tgcgaggagtgccgagtgcagatcaccacggcaacagacaagctgcggttcttcggggtg
gtgcgagaccagatcatgtggatggacagcatcatctctcagatcggcacaggggacaat
ccaagcattccctccagcgatataacgggctctggactctctggtcctttcagggatgtg
tcctcagtggaggtactgatgaactaccaccagagcttgaagagtgaggtggaggcgcgc
agtaagagtgtgctgcagtgcatcgagatgggcaagacgctgctggccgcgcgcaaccct
gctgctgaggagatcaaggagaagctggatacggtggtggccaagcagtacgagctgtct
gagaaatgggacaaacactgggaggtcctgcagcacatgctggaggtgcaccagtttgcc
caggaagcggtggtggccgaggcctggctcacagcccaggagcccttcatcaacagcaag
gagttgggcgccagcgtggacgaggtggagcagctcatccgccgccacgaggccttccgc
aaggccgccgccacctgggaggagcgcttcagctcgctacgacgcctcaccacggtggag
aagatgaaagcggagcagagtaagctccctcccacccccctgctgggtcgaaaggtgttc
ctggacccccaggagacgtcccccgcccggagccagggctcccccctgatgagacggatc
ctttacgagcaggccgagcccagagccgaaaggcccccccaggaaccctcgccctcttcc
gtggcccgccgcctgggctccaccgtagccaactacacccccatcatgaacggctccagt
ggctaccgcagcagtctggaggcccgggccatgcccatgatggggggattggctgggggt
gtagtcggggtggcagccaggctgggaacagccgctgtggaggcaacacatttagggacc
accgccgccatggaggtccgaggggtggcagcaggatttgggactgccgcctctgaagcc
agggggttggcagcaggattggtcacccccgcggtcgaggccaaagggatagctgcaagc
ttggtgactggggcagccgccgcagtggaggtgaaagcctcgcagtacctccggcagcct
aagatcaaacacatggacgacatggtgacgcccatgctggtggcctgtaggctggagaag
gcgagagagaaggaggtgcgagagagggagcagagagagagggagagagatattgtgtta
atggagccagcgcccgtgatgccggtgatggccgaggtggtgctccaggagatggggagg
gaggggatgggcagggagaggctgaacagcgagcccagcagcagagaccaccgggcgggg
agcagccggtcggagccccagcagagagacagggacagagacagtagggacagtagggac
agtcacagggaagccaggctggagcgccagcactctagtgaggcgctgatgatccaggcg
cggcgggatgagctgccccaggaggtgtggcgggaacgggccgagcgcaaagagaggaag
ctggaaaggcagacgtccagcgagcaggagggccacggacacgagggccggaggaaagac
cgccaccggacggagagacaggagtccagtgaacacgacacagccaaggagcagtcagac
agacgttctacggagaaaaggtcaggtggccagaccttgtttgatatagtggagcagcta
aaagagagagaggcagcaacggcacgaggggaggtccctaaagtgccgaacggcgtgcca
gagaagtcttccggacgtccagaccggccgcgagcacgggatcgtcctaagccccggcgg
agaccccggcccaaggacccatctgcaggagaggccaccacccggcggtcacgctcggcg
ccggagccaggggtggctcagggcgtgagcccttcagtcccccaggctcccagccacaca
gcccaccacgagggcttcctcttccgcaagctggacatcgagaccatgaggaagagctct
aacagcagatcctgggtcaacctgtactgtgtgctgaacaaaggagagataggcttctat
aaggacgctaagaacaccgccacaccttacaacaacgagcccatgctcaacctcggccac
tgccactgcgacgtcacccttggatacaagaagaagaaaaacgtctttactcttaaaacg
aaagacggaagtgaatttctgttccacgcaaaggatgagtcacaggatgatctaaaggcc
tggaccaccaacatcaacaagagcatcgcagagcatgaggagattgccaaatggggtcag
ccccagcctactacctcatccacggacgagggcacgcgccgcgacggcagcaaggccgat
aacaagtcagagcggggagaaaagtcagaccggggggaaaggccgcagagagccgagcgc
tctgagaggtcggataagggtgagaccaaatcggacaccaagcgttcagaaaagtccagc
aagaagaaatga
DBGET
integrated database retrieval system
