Oncorhynchus mykiss (rainbow trout): 110507254
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Entry
110507254 CDS
T07259
Name
(RefSeq) nectin-1-like
KO
K06081
poliovirus receptor-related protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03266
Virion - Herpesvirus
omy04514
Cell adhesion molecule (CAM) interaction
omy04517
IgSF CAM signaling
omy04520
Adherens junction
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
110507254
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110507254
04517 IgSF CAM signaling
110507254
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110507254
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110507254
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110507254
04090 CD molecules [BR:
omy04090
]
110507254
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
Nectin family
110507254
CD molecules [BR:
omy04090
]
Proteins
110507254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
Ig_2
I-set
ig
Ig_PVRIG
C2-set_3
TM_ErbB1
Phage_Coat_B
DUF4786
Motif
Other DBs
NCBI-GeneID:
110507254
NCBI-ProteinID:
XP_036820520
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All DBs
Position
27:50665719..50850459
Genome browser
AA seq
497 aa
AA seq
DB search
MLASVWIVLLAVNIEAGDGQSVQMDSIKSGFVGSQVELRCIFVNSNPPVKISQVTWQKFL
NGTKQNVAIANPSLGVSVLPPFKERVTFKQAAVRHRTPSLEDTTIMFSNLRLSDEAAYIC
EYTTFPAGNRENMVNLTVFARPQTRMTLTTPTIVARPQKRKMTVATCLSANGKPQSVIKW
DTRLKGEATFQETQNANGTVTVRSNYVVVPSRETHKQKLTCIVTYNNERITDSVVLNVQY
EPEVKIEGFDGNWYLDRQDVSLTCNADANPPVTVYQWKVLNGSLPSTVEILNNSLIFKGA
VTYELAGTYVCAATNGIGTRTGLVQVNVTEFPNNPPPGGPEIPQEQHNAGAVIGGAVGGV
VLLAAAATLLFMFLRRRQRTFKGDYSTKKQVFGNGYSKAGGLPAHPPIPNNLQYPDDSDD
EKKPAQIAVTGGFEASERDFDGDAEDLKRPYFTVDEGESRDYDERTLAFQYDPETEIADD
MVSQTDGSVISKKEWYV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgagtgtttggattgtcctcctggctgtgaacatagaagctggagatggacag
agtgtccagatggactccattaagtcaggcttcgtgggctcccaggtggagctgcgttgt
atcttcgttaattccaaccctccagtcaagatctctcaggtgacgtggcagaagttcctg
aacggcaccaaacagaacgtggccatcgccaacccgtcgctgggggtgtccgtgctcccg
cccttcaaggagagggtgacgttcaagcaggctgcggtccgccaccgcaccccgtctctg
gaggataccaccatcatgttctccaacctgaggctgtctgatgaggccgcatacatctgc
gagtacaccaccttccctgctgggaaccgagagaacatggtcaacctcaccgtgtttgct
cgacctcagacccgaatgaccttgaccacgcccaccatcgtggcccgcccccagaagcgg
aagatgaccgtggcgacctgcctctcggctaatggaaagcctcagagtgtgatcaagtgg
gacacgaggctgaagggcgaagccacgttccaagagacgcagaatgccaacggcacggtg
accgttaggagcaactatgtggtcgtgccgagcagagagacacacaaacagaaactcacc
tgcatcgtaacctacaacaacgagaggattacagacagtgtcgtgctcaacgtgcaatat
gaacctgaggtgaagatcgagggcttcgatggtaactggtacctggaccgtcaggatgtc
agcctcacctgcaatgctgacgctaaccctcctgttaccgtctaccagtggaaagtgttg
aatggatctcttcccagcaccgtggagattcttaacaactctctgatcttcaagggcgcg
gtgacctatgagctagctgggacgtacgtgtgtgctgccaccaatgggattgggactcgt
actggtctggtccaggttaatgttactgaattccctaacaacccaccacctgggggccct
gagatcccgcaggagcagcacaatgcgggtgccgtcatcgggggcgccgtgggcggggtc
gtcctgttagcggcggccgccaccctgctctttatgttcctgcgccgccgccagcgcacc
ttcaagggcgactacagcaccaagaagcaggtgtttgggaacggctacagcaaggccggg
ggcctgccagcccaccctcccatccccaacaacctgcagtacccagacgactcagatgac
gagaagaagcctgcccagatcgctgtgaccggagggttcgaggcaagcgagcgtgatttt
gatggagatgcggaggacttgaagaggccctatttcacggtggatgaaggagagagcaga
gattacgacgaacggactcttgctttccagtacgaccccgagacggagatcgccgacgat
atggtgtcccaaaccgatggctctgtcatttcaaagaaagagtggtatgtgtag
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