KEGG   Oncorhynchus mykiss (rainbow trout): 110507254
Entry
110507254         CDS       T07259                                 
Name
(RefSeq) nectin-1-like
  KO
K06081  poliovirus receptor-related protein 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03266  Virion - Herpesvirus
omy04514  Cell adhesion molecule (CAM) interaction
omy04517  IgSF CAM signaling
omy04520  Adherens junction
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    110507254
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    110507254
   04517 IgSF CAM signaling
    110507254
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    110507254
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110507254
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110507254
   04090 CD molecules [BR:omy04090]
    110507254
Cell adhesion molecules [BR:omy04515]
 Immunoglobulin superfamily
  Nectin family
   110507254
CD molecules [BR:omy04090]
 Proteins
  110507254
SSDB
Motif
Pfam: C2-set_2 Ig_3 V-set Ig_2 I-set ig Ig_PVRIG C2-set_3 TM_ErbB1 Phage_Coat_B DUF4786
Other DBs
NCBI-GeneID: 110507254
NCBI-ProteinID: XP_036820520
LinkDB
Position
27:50665719..50850459
AA seq 497 aa
MLASVWIVLLAVNIEAGDGQSVQMDSIKSGFVGSQVELRCIFVNSNPPVKISQVTWQKFL
NGTKQNVAIANPSLGVSVLPPFKERVTFKQAAVRHRTPSLEDTTIMFSNLRLSDEAAYIC
EYTTFPAGNRENMVNLTVFARPQTRMTLTTPTIVARPQKRKMTVATCLSANGKPQSVIKW
DTRLKGEATFQETQNANGTVTVRSNYVVVPSRETHKQKLTCIVTYNNERITDSVVLNVQY
EPEVKIEGFDGNWYLDRQDVSLTCNADANPPVTVYQWKVLNGSLPSTVEILNNSLIFKGA
VTYELAGTYVCAATNGIGTRTGLVQVNVTEFPNNPPPGGPEIPQEQHNAGAVIGGAVGGV
VLLAAAATLLFMFLRRRQRTFKGDYSTKKQVFGNGYSKAGGLPAHPPIPNNLQYPDDSDD
EKKPAQIAVTGGFEASERDFDGDAEDLKRPYFTVDEGESRDYDERTLAFQYDPETEIADD
MVSQTDGSVISKKEWYV
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgttggcgagtgtttggattgtcctcctggctgtgaacatagaagctggagatggacag
agtgtccagatggactccattaagtcaggcttcgtgggctcccaggtggagctgcgttgt
atcttcgttaattccaaccctccagtcaagatctctcaggtgacgtggcagaagttcctg
aacggcaccaaacagaacgtggccatcgccaacccgtcgctgggggtgtccgtgctcccg
cccttcaaggagagggtgacgttcaagcaggctgcggtccgccaccgcaccccgtctctg
gaggataccaccatcatgttctccaacctgaggctgtctgatgaggccgcatacatctgc
gagtacaccaccttccctgctgggaaccgagagaacatggtcaacctcaccgtgtttgct
cgacctcagacccgaatgaccttgaccacgcccaccatcgtggcccgcccccagaagcgg
aagatgaccgtggcgacctgcctctcggctaatggaaagcctcagagtgtgatcaagtgg
gacacgaggctgaagggcgaagccacgttccaagagacgcagaatgccaacggcacggtg
accgttaggagcaactatgtggtcgtgccgagcagagagacacacaaacagaaactcacc
tgcatcgtaacctacaacaacgagaggattacagacagtgtcgtgctcaacgtgcaatat
gaacctgaggtgaagatcgagggcttcgatggtaactggtacctggaccgtcaggatgtc
agcctcacctgcaatgctgacgctaaccctcctgttaccgtctaccagtggaaagtgttg
aatggatctcttcccagcaccgtggagattcttaacaactctctgatcttcaagggcgcg
gtgacctatgagctagctgggacgtacgtgtgtgctgccaccaatgggattgggactcgt
actggtctggtccaggttaatgttactgaattccctaacaacccaccacctgggggccct
gagatcccgcaggagcagcacaatgcgggtgccgtcatcgggggcgccgtgggcggggtc
gtcctgttagcggcggccgccaccctgctctttatgttcctgcgccgccgccagcgcacc
ttcaagggcgactacagcaccaagaagcaggtgtttgggaacggctacagcaaggccggg
ggcctgccagcccaccctcccatccccaacaacctgcagtacccagacgactcagatgac
gagaagaagcctgcccagatcgctgtgaccggagggttcgaggcaagcgagcgtgatttt
gatggagatgcggaggacttgaagaggccctatttcacggtggatgaaggagagagcaga
gattacgacgaacggactcttgctttccagtacgaccccgagacggagatcgccgacgat
atggtgtcccaaaccgatggctctgtcatttcaaagaaagagtggtatgtgtag

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