Oncorhynchus mykiss (rainbow trout): 110507382
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Entry
110507382 CDS
T07259
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X4
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04270
Vascular smooth muscle contraction
omy04625
C-type lectin receptor signaling pathway
omy04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110507382
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
110507382
09153 Circulatory system
04270 Vascular smooth muscle contraction
110507382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110507382
Membrane trafficking [BR:
omy04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110507382
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
PH
Motif
Other DBs
NCBI-GeneID:
110507382
NCBI-ProteinID:
XP_021443011
Ensembl:
ENSOMYG00000046986
LinkDB
All DBs
Position
27:4790174..4858588
Genome browser
AA seq
1467 aa
AA seq
DB search
MSDTQSSITDRFSNKANSSSILSKDHPPDKKPKSDKPAVSSSHEFDPTDVLVQKSDCVLV
EGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAERAGVQTGDRIIKVNG
TLVTHSNHVEVVKLIKSGSYVALTVLGRPPGLPQIPLSESEAKLGFPGPQAGSSPVSSPS
APGQPTGERPYSPHDRITSPLPIWEENNSVHSQKVDILQKMLSKEQQDLQAMKEEYSRNP
TPKLLKDIQEAKKHIPQLQWQLSKATGGAQDALQLGDGDDGSMVDMDHTPSSRGDSSNDL
SWSSSTMSPVLRSFAPASPESLCQRDMLSYHSPKSTPRDSFNSCHSPDPEDTPDLDSLSP
SAVNSPSSRFVSQIIGAEDDYFDSDQEQVNGQCSCFQSMELLKSRPAHLAAFLHHVVSQF
DPAPLLCYLFADLCKQTNSKETRRVFMDFHNFFIDRGANLKVAVPESISSDLDRRRTELI
PEEQNRQLVQMMQDTLLPDIQRNLEDFRQKRSMGLTLAEGELARLDTERVRDRVALERER
SCAENIITKIEDVLLTTQSTEEEKCTTMQYVILAYMKRLGVKVKEPRGLEFKRVRLNFLP
KIKKSVKTEKEGGEEKVKRTRFPSILGPPRRPSRVDPTSIGKAMDLNKPRPQKQLSQPCL
GAVEHLEAGRLTASQSSEGSELTHSSNTNATSPTNSTTNSHASDGGSRDSEFVLTPNSAF
LKLSEGLGDLDSLQYTPNTHFDYSLSPYSLDQLQEEDRESRILEGTPKSIRRLDGLGSTE
VQSEDDQGGTDSEHDPLNWQQLVGREVLAGLGAHEIKRQEVINELFYTERAHLRMLKVLD
NIFYQKLTREAILPPADIKNIFTNLGDIVQLHVLISEQMATIRKRNETSVIDQIGDDLLS
WFSGGEEEKIKQAVGTFCSNQPFALELIKSRQKKDSRFTSFMQEAESNRLCRRLQLKDII
PVEMQRLTKYPLLLENIAKYTDDTMEKDKVKKAGDCCRKILNHVNQAVKESENKQRLEDY
QRRLDLSSLKQTENPMITELKNLDLTKKKMIHEGPLSWKVNKDKTIELYTLLLEDILVLL
QKQDERLVLKCHSKNLSGTADTKHIFSPIIKLNAVLVRSVATDNKSFFVLSMSDNGAQIY
ELMAQTVSEQRMWQRQITQRADAMKVKPHSGIHLPRTDVEIIAADVARLGKDPDRISSGS
SQSIDKECSAASGGVMQTSLPDAKSFLGLKPEEEEPSREEGLYEDPDLADRLPFRMAVDG
FSESDGLGFSPSRADDALKTLSALKQVLVTQLMSQEDGERAGRSSSGGGRLLRTTSLRTP
VDSRARVAVQKGSGMCTQASHPEDPAQDLVSGDTGFFESPEDYAGYLVLEGYGGSGESST
DDDLQATGKQLSASRGCGAGDSGISLRFSSASQAGSISSFSRQVLSHLRNLQTNLNHLKE
VEAKYHSLLRQRPARSSTDTDINKDKR
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacacagtccagtatcactgataggttttccaataaagcaaacagcagtagc
attctcagtaaagaccacccccctgacaagaaacccaaaagtgataaaccggcagtctcc
tcttcacatgagtttgaccctacagacgttctggtgcagaagagtgactgtgttctagtg
gaggggaagcccgagtcctgtgggcttgtccagcgatgtgtgatcattcagaaagatgag
aatggctttgggctgacggtgagcggagacaacccagtgtttgtgcagctcgtcaaggaa
gatggcgctgcagagcgtgcgggtgtacagacaggtgaccggatcatcaaggtgaacggg
accctagtaacacattcaaaccacgtggaagtagtcaagctcatcaaatcgggctcctat
gtggccctcacagtgttgggccgaccccctgggttgccccagatccccctatcggagagc
gaggctaagctggggttcccggggccccaggctgggtcgtcccctgtctcctctccaagc
gctcctggacagccaacgggggagcgcccatacagcccccatgaccgcatcacctctcct
ctaccgatatgggaagagaacaacagcgtacacagccaaaaggtggacatcctgcagaag
atgttgtccaaggagcaacaagatttgcaggcaatgaaggaggagtacagcaggaatccg
acgccaaaactactgaaggacatccaggaagccaagaagcacattccacagctgcagtgg
cagctcagtaaggccactggaggagcacaggatgctctgcaattgggtgacggagatgac
ggtagcatggtggacatggaccacaccccttcctccaggggagacagtagcaatgacctc
tcgtggagcagcagtaccatgtcccctgttctccgcagttttgcacctgcttccccggag
agcctgtgccaaagagacatgttgtcctaccacagcccaaagagcacgccccgagacagc
ttcaactcctgccactcccccgacccagaagacactccagacctggactcgctgtccccc
tctgctgtaaacagcccttcctcacgcttcgtctcccagatcattggagctgaggacgac
tactttgactctgatcaagaacaggtcaatggccagtgcagctgtttccagagcatggag
ctgctcaagtccagacctgcccacctggcagctttcctgcatcacgttgtctcgcagttt
gaccctgcaccgctgctctgctacctcttcgctgacctgtgcaagcaaactaactccaaa
gaaaccagacgggtgttcatggacttccacaacttcttcattgaccggggagctaattta
aaagtagctgttcccgagtccatctcctctgaccttgaccggcggaggacggagctgatc
cccgaggagcagaacagacagttagtccagatgatgcaggacaccctgctccctgacatc
cagaggaacctggaggacttcaggcagaagcgcagtatgggcctaaccctggctgagggg
gaactggcccggctggacactgagcgcgtcagagaccgggtagcactggagagagaacgc
tcctgtgctgaaaacatcatcaccaagatcgaggatgtcctgttgacaacccaatccaca
gaggaggagaaatgcactactatgcagtatgtcatcctcgcgtacatgaagcgccttgga
gtgaaagtcaaagagccacggggcctagagttcaaaagggtccgcctgaacttcctcccc
aagatcaagaagagcgtcaagaccgagaaggagggaggggaggagaaggtgaaacgaacc
aggtttcccagcatcctcggacctccgcgccggcccagccgcgtcgaccccacgtccatc
ggcaaggccatggatctcaacaagccgcggccccagaagcagctgtcccagccctgcctg
ggggccgtggagcacctggaggcgggtcgcctgacggccagtcaatccagcgagggctca
gagctcacacattcctccaatactaacgccacctcgccaaccaacagcaccaccaacagc
cacgcctcagacggaggcagcagagactctgagtttgttctgaccccgaactctgccttc
ctcaaactgagcgagggtcttggagacctggacagtctacagtacactccaaacacacac
tttgactatagcctgagcccatacagcctggaccagctgcaggaggaggacagggagagc
aggatccttgaaggaacacccaagtctatcagaaggttggatggccttggttctacggag
gtgcagagtgaagacgaccaaggaggcacggactctgagcacgaccctctcaactggcag
cagctggtgggacgtgaggtcctggctggactcggggcccacgagatcaagagacaggaa
gtcattaacgagctgttctacactgagagggcccacctgcggatgctcaaagtgctggac
aacatcttctaccagaagctcaccagagaggccatactgcctcctgccgacatcaagaac
atcttcaccaacctgggagacattgttcaactgcatgttttgatatctgagcaaatggca
acaatccggaagaggaacgagacgtccgtaatcgaccaaataggagacgacttgctgtcc
tggttcagcgggggcgaggaggagaagatcaagcaggcggtgggcacgttctgcagcaac
cagccctttgctctggagctcatcaagagcaggcagaagaaggactcgcgcttcacctcc
ttcatgcaggaggctgagagtaaccgactgtgtcgaagactccaactgaaggacatcatt
cccgtggagatgcagaggctcaccaagtaccctctcctactggaaaacatcgccaagtac
acagatgacaccatggagaaggacaaggtaaagaaggcaggcgactgctgcaggaagatt
ctcaaccacgtcaaccaagcggtgaaggagtctgaaaacaaacaaaggctggaggactac
cagaggcggctagacctctcgtctctgaagcagacggagaaccccatgattacagagctc
aagaacctggacttgaccaagaagaagatgatccacgagggaccactgtcatggaaggtc
aacaaggacaagactattgagctgtacaccctgctcttggaggacatcctggtgctgctg
cagaagcaggacgagcggctcgtcctcaagtgccacagcaaaaacctgtcgggcaccgcc
gacaccaagcacatcttcagccccatcatcaagctcaacgcggtgctggtgcgctctgtg
gccacagacaacaagtcgttctttgttctctcaatgtcggacaacggggcacagatctac
gagctgatggcccagaccgtatcagagcagagaatgtggcagcggcagatcacccagaga
gcggacgccatgaaagtgaagccgcacagcggcatccacttacctcgaacggatgtggag
atcatcgctgcagacgtagcccgactcggtaaggacccggaccgcatctcctctggaagc
agccagtctatagataaagagtgcagcgctgcctctggtggcgtgatgcagacctctctc
ccagatgccaagtcctttctaggactcaagcccgaagaggaggagcccagccgggaggag
gggctttacgaggacccggaccttgcagataggctgcccttccgcatggccgtagacggg
ttcagcgaatcggacgggctgggcttcagtccttctagggctgacgatgccttaaagaca
ttgtcggcgctgaagcaggtcctggtgacccagctcatgtcgcaggaggacggcgagcgt
gctgggcgctcctcctcggggggtgggcgtcttctcaggaccacgtccctgaggaccccc
gtggacagccgtgcccgggtggctgtgcagaaaggctccgggatgtgcacccaggccagc
caccctgaggacccggctcaggacctggtgtcaggggacacgggtttctttgagtccccc
gaggattatgcagggtacctggtcctggagggctacgggggctcgggggagagcagcacg
gacgatgacctccaggccaccgggaagcagctgagcgcctcgcggggctgcggggcagga
gactctgggatcagcctgaggttctcctctgcctcacaggcaggtagcatctccagcttc
agccgacaggtcctgtcccacctccgcaatctgcagaccaacctcaaccacctcaaggag
gtagaggccaagtatcacagtctactacgccagaggccggccaggtcatcgacggacacg
gacatcaacaaagataaaagatag
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integrated database retrieval system
