Oncorhynchus mykiss (rainbow trout): 110507476
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Entry
110507476 CDS
T07259
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110507476
04121 Ubiquitin system [BR:
omy04121
]
110507476
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
110507476
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Atypical E3
110507476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
110507476
NCBI-ProteinID:
XP_021443164
Ensembl:
ENSOMYG00000036885
UniProt:
A0A8C7T843
LinkDB
All DBs
Position
27:complement(9266783..9271687)
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AA seq
623 aa
AA seq
DB search
MSSPQSYSRRQWCCYLCDLPKMPWAMIWDFSETVCRGCVNYEGTDRIEFIIETARQLKIT
HVMQDDRSPCPQPTKHGPGGRDGPVEGGRPLPERFERGRGDYGAPARIPNGLHRIDDRGP
QQELSGQSPNNARRPMGGTVPPNLMTQGLVGAPHGLLAAVPGLNARVGGAPLTLSAPMLN
EITKRQLSMGMGVASFLSPEFEKDLREKQRNAEALAELSESVRNRADDWAGRPKAVRGAL
LTLSGCTPFNVRFKKDHSLVGRIFAFDAKLALDFELKIFAEYPCGSGNMFSSLAPLVKQM
FHDSQRDSGSKMVNSGLKYVEYEKRHGAGDWRLLSELLSDAVRAFKDTPGPDVLPQPYLD
ASCSMLPTALCHMSRSAPPVRGRRRKASPEPQGGEVVTTEEQLRQHWPMGMYPGMAIHLA
ASSFPSVSQPPPHQEGSASHSHRSDPSPTTALMSVAESPREAPSSSSSGGGLGHSSLAVR
QSSSSPMAACPAGQQRRLASRNGEPQGASNSAGGTTAALPLAGASDQGALDPSGSSGPPL
CCTICHERLEDTHFVQCPSVAAHKFCFPCTRDFIRSQGAGSEVFCPSGERCPLVGSNVPW
AFMQGEIATILAGDVKVKKERDP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccccagtcatattcaaggcggcagtggtgttgttacctttgcgatttgcct
aagatgccatgggctatgatctgggactttagcgagactgtctgccgaggctgtgtgaat
tatgaaggtacggaccgtattgaatttatcatagagacggcaaggcagttgaaaataact
catgttatgcaggatgacaggtccccgtgtccccaacccactaaacatggcccaggtggg
agagatggacctgtggagggtggcaggccacttcctgaacgctttgaaaggggaagaggg
gactacggagccccagcacggattcccaacggtctgcacagaatagatgacaggggccca
caacaagaactcagtggacagagtcctaacaacgccagaagacccatggggggtaccgtt
ccgcccaatttaatgacacaaggccttgtgggggctccgcacgggttgctagcagctgtg
cctggtttaaatgccagagtcgggggagcccccctcaccctctctgcccccatgctgaac
gagatcaccaagaggcagctgagcatgggcatgggtgtggcctccttcctgagccctgag
tttgagaaggatctgagggagaagcagaggaacgcagaggctctggccgagctgtcggag
agtgtacggaaccgagcagacgactgggccggccgacccaaggctgtacgaggggccctg
ctcaccctctccggctgcacccccttcaacgtacgcttcaagaaggaccacagcctggtg
ggacggatctttgcattcgacgccaagctggcgctggactttgagctgaagatctttgcg
gagtacccgtgcggctcggggaacatgttctccagcctggcgccgctggtcaagcagatg
ttccacgacagccagagagactctgggagcaagatggtcaactcgggcctgaagtatgtg
gagtacgagaaaaggcatggcgcgggggactggcgactgctctctgagctgctgagtgat
gcggtacgggcctttaaggacacccccggccctgacgttctcccccagccctacctggac
gccagctgctccatgctgcccactgcgctgtgtcacatgtcccgctcggcaccgccagtc
cgcgggcgccggaggaaggcttccccagagccccagggtggagaggtagtgaccacagag
gagcagctccggcagcactggcccatggggatgtacccgggaatggctatccacctagct
gcctcctccttccccagcgttagccagccacctccccatcaggagggctcagcctcccat
tcccacagaagcgacccctcccccaccacagcactgatgagcgtggctgagtcacccaga
gaggcccctagcagcagcagtagtggtggaggcctgggccactcctccttggcagtgagg
cagagcagcagcagccccatggcggcctgccctgcggggcagcagcggcgcctggcctcc
aggaatggggaacctcagggagccagcaactctgcagggggcaccacagcagctctccct
ctggctggggcctcggaccagggagcattggacccctccggctcctctggtccccctctc
tgctgcaccatctgccacgagcgcttggaagacactcactttgtccagtgcccctcggtt
gcggcccataagttctgcttcccttgcaccagagacttcatccggagccagggggccggc
agcgaggtgttctgtcccagtggagagcggtgtcccctggtgggctccaacgtgccctgg
gccttcatgcagggagagatcgctaccatcctggctggagatgtcaaggtgaagaaggag
cgcgacccctaa
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