Oncorhynchus mykiss (rainbow trout): 110507592
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Entry
110507592 CDS
T07259
Name
(RefSeq) WD repeat-containing protein 20
KO
K24731
dystrophia myotonica WD repeat-containing protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110507592
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
110507592
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WD40_Prp19
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Aladin
Tricorn_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
WDR55
PD40
WD40_Gbeta
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
110507592
NCBI-ProteinID:
XP_021443352
Ensembl:
ENSOMYG00000039324
LinkDB
All DBs
Position
27:13216479..13222270
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AA seq
692 aa
AA seq
DB search
MPVAPIFIVVSSIISRSKFQFPVWLVCRLLKMAGDGGALKDINEIKSQFRTREGFYKLLT
LSDSQQRGGLPRGLSAGTTVGPGGGPGSIPGGGVGVVQGPGAASSNAAANSSPAGFLPPV
RVSMVKLQPEDPSEESERVCFNIGRELYFYTYTNIKKAVDLSKPIDKRIYKGTQPTCHDF
NQYSATADSVALIVGFSAGQVQYLDPIKKETSKLFNEERMIDKSKVTCLKWLPKSENLFL
ASYASGHLYLYNVEHPCGTAAPQYSLLRQGEGFAVYACKTKTPRNPLLRWAVGNGGLNEF
AFSPDGVHVACVGQDGCLRVFHFDSMELQGVMKSYFGGLLCVSWSPDGKYLATGGEDDLV
TVWSFTESRVVARGHGHKSWVNVVAFDPFTTSLGDEEPMELSGSEEDLQQGPLHFGRVRT
SSTLSRLSRHSSKGGSPSVTYRFGSVGQDTQFCLWDLTDDVLYPRLPLSRALTNTFGPTI
PSSVSGTINNTTGGGSGGVVGGVEGHHHPTTNPHQPPTMPLPLPRSLSRSNSLPHPAVAN
VSKGQSTTEGGGGSGGGNATPFSIGRFATLSLQERKSDKSGGSGVGGEKEHKRYHSLGNI
SKSNDKINVAPRSSRLDAAKVLGTTLCPRMHEVPLLEPLVCKKIAHERLTVLVFMDDCII
TACQEGLICTWARPGKVNLTAQNGNSPSGTVV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcgctcccattttcattgtagtttcgagtattatttccaggtcaaaatttcag
tttcctgtgtggcttgtttgtaggcttctaaaaatggccggtgatggaggcgctctgaag
gatatcaatgagattaaatcccagttcaggactagagagggtttttacaaactactgacc
ctctcggattcacaacaacgaggcggactacctcggggtttgtccgcaggtaccacggtg
ggccccgggggtggaccgggttcgatacccggtggtggtgtaggtgtggtgcaggggccc
ggagctgcctccagcaatgccgcagccaactcctctccggcgggattcctccctcctgtc
agggtctccatggtgaagcttcagccggaggacccgagcgaagaatccgagagagtgtgt
tttaacatcggaagagagctttatttctacacctacacaaatataaagaaagctgtggac
ctcagtaaacccatagacaagcgtatctacaagggcacccagcccacctgccatgacttc
aaccagtactctgccacagcagacagtgtggccctcattgtgggcttttcagcaggccag
gttcaatacctggaccccattaagaaggagacaagcaagctcttcaatgaggagaggatg
atagacaagtccaaggtaacctgtctgaaatggctgcccaagtcagagaatctgttcctg
gcctcatacgccagtggtcacctctacctctacaacgtggagcacccgtgtggcaccgcc
gccccgcagtattccctgctccgccagggcgaaggctttgccgtctacgcctgcaagacg
aagacgccccgaaacccgctgctgcgctgggccgtaggaaacggaggccttaatgagttt
gccttctcgccggacggcgtgcatgtggcgtgcgtgggccaggacggctgcctgcgtgtc
ttccactttgactccatggagctgcagggcgtgatgaagagctacttcggtggcctgctg
tgcgtctcctggagccccgatggcaaatacctggccacgggcggagaggacgacctggtg
acggtgtggtcgtttacggagagccgtgtggtggcccggggacacggccataagtcctgg
gtgaatgtggtggcctttgaccccttcaccaccagcctgggggacgaggagcccatggag
ctgagtggcagcgaggaggacctacagcaggggccactgcactttggccgcgtgcgcacc
agcagcacgctgtcacgcctctcccgccacagctccaagggcggctcgccctccgtcacc
taccgcttcggctcggtgggccaggacacccagttctgcctgtgggatctgacggatgac
gtgctgtacccgcggctgcctttgtcccgtgccctcaccaacaccttcggtcccaccatc
ccctcctctgtcagcggcaccatcaacaacactacaggcggagggagtggaggggtcgta
ggcggggtagagggccaccaccaccccaccactaacccccaccagccccccaccatgccc
ctgccactcccccgctccctgtcgcgctccaactccctcccgcaccccgccgtggccaat
gtctctaagggccagagcacaacagagggcgggggagggagcggagggggcaacgccacc
cccttcagtatcggccgcttcgccacgctctctctgcaggagcggaagtcagacaagtct
ggagggagtggggtgggcggggagaaggagcacaagcgctaccatagcctgggaaacatc
agcaagagcaacgacaagatcaacgtagcgccacgcagcagtcgcctagacgccgccaag
gtcctgggcaccaccctgtgtccgcggatgcacgaggtgcccctgctggagcccctggtg
tgtaagaagatcgcccacgagagactgaccgtgctggtattcatggacgactgcatcatc
accgcgtgccaggagggcctcatctgcacctgggcacggcctggtaaagtgaacttgaca
gcacagaacgggaactctcccagtggcacggtagtatag
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