Oncorhynchus mykiss (rainbow trout): 110507602
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Entry
110507602 CDS
T07259
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110507602
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
110507602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
CarboxypepD_reg
TSP1_CFP_C
I-set
Ig_2
CarbopepD_reg_2
TSP1_spondin
TTR_TEN1-4
TSP1_ADAMTS
ig
Motif
Other DBs
NCBI-GeneID:
110507602
NCBI-ProteinID:
XP_021443410
Ensembl:
ENSOMYG00000019546
LinkDB
All DBs
Position
1:21271127..21303061
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AA seq
1253 aa
AA seq
DB search
MWDFTKVSLLLSFLVAVAAAQGPFRNSSLLRKWSQTDRSRKLAYNLLTEPQQTTGMTEWT
SWFNIDHPGGNGDYERLEAIQFYYRERVCARPVAMEARTTDWVAAAETGEVTHSSLEKGF
WCINKEQPYGRICSNYYVRFQCPPVQAYWMDWSAWGPCSATACNDVGIQVRQRKCMSIQP
MPLLLVPPCQGPQTERMECATLPCEAKWTQWGTWGACSVTCGKGRRIRRRTCVRTSITVQ
CVGRAAEIQKCGKYPCPTKCKRECPDGRPSEDCSRCVCVGHMLQGEVLSMTGVPVMGARI
ALASRPKIIRTRTDAKGLFRLPGVCSSSPSQLYIRKEKFAPATASTSSNSSGSSWVRAVL
KYAEKPYIVKHPEDKVRYEGQRVMLCCKAAGEPMPDKYYWYHNRTLLDRNVFKYEEDLVL
RDLKPEQTGHYYCKASSQTGSIKSSQAFLSVIAKGIPACNPTPKNHLIRLPMDCVQPGTD
SKLYDAGRCTHNKCVGSLDFDLRCRDGGGYCCGVQKMESQVINCGSYSLPIKAVTECGCL
KCVVPKVLVRGRVVTVDNNEPLRFGHMYVGKERVGTTGYKGGFTLNITPDTERLVVNFVD
PTEKFIDTPKVFIFDKRGGSVYHDVKVMRKQEPIDINAGETNTIDLGEIKGEDPIGQIVI
PPNSFHKKNGEVYEGTVKASVTFIDPRNITTAAAAPGDLNFVDDEGDMLPLRTYGMFSVD
FRDDTNQEVLGAGAVQVLLDTQHVKMQEHIPKMKLWSLNPDTGVWEEESDFHYTQTTSGG
NGRRKREERTFLIGNMEIRERRLFNLDVPENRRCYVKVRTYMSDKFLATEQLEGVVISLI
NLEPKPGFSSNPRAWGRFDSVITGHNGACLPAFCDAQVPDAYTAYVTGIMGGEELEAAPS
TPKMNPNIIGVSQPYLDKIDYQRSDHNDPALKKTAFRINLAKPNPNNLEETNGPIYPYQS
LISCENAEVNANHFRFFRVEKDKYEYNVVPFQENDLTSWTGDYLSWWPNPQEFRACFIKV
KIQGQREVMIRSQNHGGTHPETAGQLYGIRDIRSTRDMHVANISAACLEFKCSGMLFDQA
AVDRSLISVLPQGNCRRVGINSLLKEYLTKHPPTSPNNESHAFNMLAPVDPLGHNYGIYT
VTDQNPRVAKEIAIGRCFDGTSDGFSREMKSDTGVALTFSCPERTLTRESLFQRLQTNPS
QTLSQMARDMREAQGLQVQGRSSRVVTYPSESTSRRSSSSSRRRSMMRTQNRQ
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgtgggactttacaaaagtgtcactactcctgtctttcctggtggcagtggcagcggct
caagggcccttcaggaacagctctctgctcaggaagtggagtcagacagacaggagcagg
aagctggcctacaacttgctgactgagccacagcagaccacaggcatgactgaatggacg
tcctggttcaacatcgaccatccaggggggaatggagactacgagcggttagaggccatc
cagttctactacagggagagggtgtgtgcccggccggtggccatggaggcccgcaccacg
gactgggtggcagcagcagagaccggggaggtgactcactccagcctggagaagggcttc
tggtgcatcaacaaggagcagccctacggacgcatctgctccaactactacgtccgcttc
cagtgcccaccagttcaggcctactggatggactggtctgcctggggcccctgctctgct
acagcctgtaatgacgtgggcattcaggtccgtcagaggaagtgtatgagcatccagccc
atgcccttgctactggttccgccatgccaggggccccagacagagaggatggagtgtgcc
accctgccatgtgaagccaagtggactcagtggggtacgtggggagcatgctcagtgacc
tgcggcaagggtcgcaggatcagaaggaggacctgtgtgagaacctctataacagtgcag
tgtgttggacgagcagctgaaatccagaaatgtgggaaatatccatgcccgaccaaatgt
aagcgtgagtgtcccgatggccgtcccagtgaggactgtagccgctgtgtgtgtgtgggc
cacatgctccaaggagaggtactcagtatgaccggtgtccccgtgatgggggccaggata
gcgctggccagccgacccaagatcatccgtacccgcactgacgccaaaggcctcttcagg
ctcccaggggtctgctccagttcccccagccagctctacatcaggaaggagaagtttgcc
ccggcgactgcatccacctccagcaacagcagtgggtcatcctgggtacgggcagtccta
aagtacgcagagaagccatacattgtaaagcacccagaggacaaagtgcgctatgaggga
cagcgtgtgatgttatgctgcaaggcagcaggggagcccatgccagacaaatactactgg
tatcacaataggaccctattggaccggaacgtgttcaaatatgaagaggatctggtgctg
agagacctgaagcctgagcagacaggacattactactgtaaagccagcagccagacagga
agcatcaagtcctcacaggcattcctcagcgttatcgctaaaggcattccggcatgcaac
cccacacctaagaaccacctcattaggctgcccatggactgtgttcagcctgggactgac
tctaagctctacgacgctggccgctgcacccacaacaagtgtgtaggctccctggacttc
gacctgcgctgcagggatggaggtggctactgctgcggggtccagaagatggagagccag
gtgatcaactgtgggagctacagcctacccatcaaagctgtgactgagtgtggctgcctg
aagtgtgtggtgcccaaggtgcttgtgcgtggcagggtagtcacagttgacaacaatgaa
ccactgcgtttcgggcacatgtacgttggcaaggagagagtgggcaccacagggtacaaa
ggaggtttcacgctcaatataaccccagacacagagaggctagtggtcaactttgtggat
cccacagaaaaattcattgacactcctaaggtgtttatctttgacaagagagggggctct
gtttatcatgacgtgaaggtgatgagaaagcaggaacctattgatatcaatgctggagag
acaaataccattgacttaggagaaatcaaaggagaggaccccattggacagattgtcata
cctccaaattctttccacaaaaaaaatggggaggtgtacgaaggtacggtgaaagccagt
gtcaccttcattgaccccaggaacatcacaacagctgctgcagcgcctggtgatctcaac
tttgtggacgatgagggtgacatgcttccactgaggacatatgggatgttttccgttgac
ttcagagatgatacgaaccaggaagtcctaggggctggagcggtccaagtactcctagac
acgcagcacgtcaaaatgcaagaacatattcccaaaatgaaactgtggtccctcaaccca
gacacaggtgtctgggaggaggagagtgactttcactacactcagaccacatctggtggt
aatggacggcgcaagcgagaggagcgcactttcctcataggtaatatggaaatcagggag
cgtcgacttttcaacctggatgtgcctgagaaccgccgctgctacgtcaaagtgaggaca
tacatgagtgacaaattcctggccactgagcagttggaaggtgtggtcatcagcctgata
aacttggagcccaagcctggcttttcctctaaccccagagcatggggtcgctttgacagt
gtgataactggacacaacggagcctgcctgccagccttctgtgatgctcaggtgcctgat
gcttacacagcttatgtcacaggcattatgggtggtgaagaactggaagcagctccctca
acccccaagatgaacccaaacatcattggagtgtctcagccatatttagacaagatagac
taccagcgttcagaccacaatgatccagctcttaagaaaacagccttcagaatcaacttg
gcaaaacccaaccccaataatttggaagagaccaacgggccaatatacccctaccagagt
ttaatatcctgtgaaaatgcagaagtcaatgccaaccatttccgattcttcagagtggaa
aaggacaaatatgaatataacgttgtgccctttcaagagaacgacttaacatcgtggaca
ggtgactacctctcttggtggcccaaccctcaagagttcagggcttgcttcatcaaggtc
aagatccagggacaaagggaggttatgataaggtcacagaaccatggaggcacccaccct
gagactgcaggccagctgtacggcatcagagacatccgcagtacccgcgacatgcacgtg
gccaacatctcagcagcttgcctcgagttcaagtgcagtggtatgctcttcgaccaagcc
gcagtcgataggtccctcatatcagtcctcccacagggcaactgtcggagagtgggcatc
aacagcctcttaaaggagtatctgaccaagcacccccctacctcaccgaacaacgagtcc
catgccttcaacatgctggccccagtcgaccccttggggcacaactatggcatctacaca
gtcacggaccagaacccaagggtggcaaaagagatcgccattggacgttgttttgacggt
acctctgacggcttctccagagagatgaagtcagacactggggttgctctgaccttcagc
tgcccagaaaggactttaaccagggagagtctctttcaacgcctccagacaaaccccagc
cagaccctgtctcagatggcaagggacatgagggaggcgcaggggctgcaggtccaagga
aggtcctcccgggtagtgacctacccctctgaatccacgagccgcagatccagctcctct
agcaggaggagatccatgatgcggacacagaaccggcagtag
DBGET
integrated database retrieval system
